CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41224	Soybean	mitochondrion	85.99	90.15
GSMUA_Achr1P03700_001	Banana	plastid	62.23	67.37
Os04t0579700-01	Rice	cytosol	63.65	67.35
AT1G63850.1	Thale cress	cytosol	64.72	66.61
CDY08328	Canola	cytosol, plastid	62.41	66.17
Bra027781.1-P	Field mustard	plastid	62.59	66.1
CDY38217	Canola	plastid	62.23	65.85
VIT_02s0025g00150.t01	Wine grape	plastid	75.89	64.17
Solyc08g081380.2.1	Tomato	plastid	71.81	63.48
GSMUA_Achr5P10260_001	Banana	plastid	61.88	63.34
PGSC0003DMT400032124	Potato	plastid	71.63	62.93
PGSC0003DMT400012106	Potato	plastid	71.63	62.73
HORVU0Hr1G005290.1	Barley	cytosol	52.3	62.24
GSMUA_Achr4P24950_001	Banana	plastid	55.32	61.66
KXG26972	Sorghum	plastid	63.83	59.31
Zm00001d026051_P002	Maize	cytosol, mitochondrion, plastid	63.65	59.24
TraesCS2B01G413600.1	Wheat	cytosol, plastid	63.12	58.08
HORVU2Hr1G094080.1	Barley	cytosol	63.83	55.73
KRG88696	Soybean	plastid	39.01	44.53
KRH24978	Soybean	plastid	38.48	43.14
KRH08332	Soybean	cytosol	23.94	41.93
KRH69973	Soybean	cytosol	20.39	41.52
KRH76896	Soybean	cytosol	33.69	36.4
KRH28572	Soybean	cytosol	32.98	36.12
KRH64045	Soybean	plastid	27.84	30.72
KRH59568	Soybean	mitochondrion, plastid	27.13	29.82
KRH53894	Soybean	plastid	26.42	29.62
KRH08334	Soybean	cytosol	10.82	27.6
KRH69974	Soybean	cytosol	10.64	27.03
KRH24478	Soybean	mitochondrion	18.97	22.06
KRH29466	Soybean	plastid	19.15	21.91

Protein Annotations

EMBL:ACUP02003345	EnsemblPlants:KRH59948	EnsemblPlantsGene:GLYMA_05G210100	EntrezGene:100818782	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BTB/POZ_dom	InterPro:BTB/POZ_dom_prot	InterPro:IPR000210	PANTHER:PTHR31060
PANTHER:PTHR31060:SF3	PFscan:PS50097	ProteinID:KRH59948	ProteinID:KRH59948.1	SEG:seg	UniParc:UPI0002339838
UniProt:K7KS10	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:39206986..39210648

Molecular Weight (calculated)

64003.4 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.405

Length

564 amino acids

Sequence
(BLAST)

001: MATLEVQKQP KRPKYRESSV SPSVNPQRRT PEAESPSSYS HRTRFSPIMD FFHSSSPTSN HDSFPSSFSK FNSALTAGLL NPLSPPPDKT RSSPTLFEIM
101: ASEPDVPHRP TPLIPPTPNP YPNKPLILDP HALLMQRISE LLVSRSPGNQ FNDAVSSDIK LTLTSKDGTC VSMNLHRQIL VAHSRFFSVK LSDRWTKHQQ
201: ELQRSPVPYE VEIADCDDVE VYIETLRLMY CKDLRKKLMR EDVSRVLGIL KVSAAIGFDA GVLSCLEYLE AAPWAEDEEE KVASLLSELR LEAVGAGEVL
301: KRVSTGVANG NEEGSDNEEV LLKLIRVVLE GKDEKARREM KGLVSKMLRE NSSQSDLRKE SLYLACDDCL QLLRHHFLQA VASDMQDLSQ IARQADNLHW
401: ILDILVDRQI AEDFLKTWAS QSDLAEAHSK VPAVHRFEVS RVTARLFVGI GKGQLLASKD VRCLLLKTWL VPFYDDFGWM RRASKGLDRH LIEDGLSNTI
501: LTLPLPCQQD ILLAWFNRFL NSGEDCPNIQ RGFEVWWRRA FWKRNGEQER TRQFRIATTS VENP

Best Arabidopsis Sequence Match ( AT1G63850.1 )
(BLAST)

001: MDYSTATTTA GNGYSSPRDS SFPSSFTKFN SALTAGLLNP MSPPPPPAMH DKTRSSPTLF EMMASEADTI GKVPVQIHNG VLPSPSSSSS SSSAAATAAR
101: TTNVNHLVIS AQDKQALAMQ RISDLLVIRS PGNQFNDPNS SDVKLTLSSK DGISITMCVH RQILVAHSRF FAMKLSDRWS KQQLPPSSSP YIVEISDCDD
201: VEVYIETLML MYCRDLRKKM MRHDVSRVLG ILKVSAAIGF DAGVLSCLEY LEAAPWSEDE EYRIASLLSE LHLENVGATE VLRRVSVEAS NGNNGSNGGS
301: NDEVLLNLLH IVLEGKDEKA RRDMKTLVSK MLRENSSGND LRKESLYLAC DGCLHKLKRQ FLQAAESDLE NVDQIARQAD NLHWILDILI DRQIAEDFIV
401: MWASLSELSE VHSKVPVVHR FEISRVTARI FVGIGKGQIL TPKEVRCLLL RNWLTPFYDD FGWMRRASKG LDRYLIEDGL SNTILTLPLA WQQEFFLAWF
501: DRFLNSNEDC PNIQRGFEVW WRRAFWRRKE QSQEPARLRV TASATENS

Arabidopsis Description

BTB/POZ domain-containing protein At1g63850 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.