CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005480_P001	Maize	cytosol, plastid	84.44	88.53
Zm00001d019337_P003	Maize	plastid	81.03	80.34
Os07t0259700-01	Rice	mitochondrion	72.48	75.18
OQU90655	Sorghum	mitochondrion	57.61	63.95
GSMUA_Achr7P03070_001	Banana	mitochondrion	51.62	57.85
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	48.72	55.13
KRH64045	Soybean	plastid	42.56	48.73
KRH53894	Soybean	plastid	41.54	48.31
VIT_04s0044g01240.t01	Wine grape	nucleus	44.79	47.55
KRH59568	Soybean	mitochondrion, plastid	40.68	46.39
EES15778	Sorghum	plastid	38.97	44.02
PGSC0003DMT400073782	Potato	cytosol, plastid	40.17	43.2
Solyc11g005950.1.1	Tomato	cytosol, plastid	40.0	43.01
AT2G13690.1	Thale cress	cytosol, plastid	38.97	41.91
CDX71164	Canola	cytosol	33.68	41.04
KXG37471	Sorghum	cytosol	26.32	29.28
KXG34316	Sorghum	cytosol	24.79	26.7
KXG26972	Sorghum	plastid	27.18	26.19
OQU79497	Sorghum	mitochondrion	24.1	24.14
OQU85769	Sorghum	mitochondrion	5.3	21.68
EER93543	Sorghum	mitochondrion	15.38	18.83

Protein Annotations

EnsemblPlants:KXG34836	EnsemblPlantsGene:SORBI_3002G098500	InterPro:BTB/POZ_dom_prot	ncoils:Coil	PANTHER:PTHR31060	PANTHER:PTHR31060:SF27
ProteinID:KXG34836	ProteinID:KXG34836.2	SEG:seg	UniParc:UPI0009DC91D6	UniProt:A0A1B6QA93	MapMan:35.1

Description

hypothetical protein

Coordinates

chr2:-:10523637..10527896

Molecular Weight (calculated)

63196.7 Da

IEP (calculated)

6.941

GRAVY (calculated)

-0.108

Length

585 amino acids

Sequence
(BLAST)

001: MAAADAAQQG PRGHRRRGGG GGATRVRPRA WCCSFGGAPD SPDLRPLPSS AASPAPAAAA AGTGAGRKLP PKSPSSAAAS FYGSPTSSRL AGLGGLIDPR
101: RILSPGRVSP IDPDAGAFPP PPLQLPLPPP PVPPASSVED SAVLHPVEQP AAVLLASAAL PSATVAPAPP PVVAVRAEAD AAGGVLDLRL FLRGRDGRCV
201: LMELDSRVLC GCSDFFAAMA PREDAAAGAG AGGKRIEVDG VENLDAFRAA VELMYDPHPV RCLAAAGVSR AIDVLEVCSS IMFNKGIKSC LTYIEAVPWN
301: ENEEEKLKNL FARFTFDEAI SQDILARLRP HNWNSSDDLT VQLIQSVTSS TSTAARKDMQ SLVNGLLSKS SVYQKDSSGL NKESLYQICY SCLESLVDLF
401: EEAREPTDYT GQAVAVRGSK PLIERVSRQA ENLNWLLEIL VNNDIAEEFV ELWAKQDMLI RMHEQASAMV RYELSRISAG VFIALGKGKV QCRGDVRSLL
501: FRGWFSTMLL DFGWLQRCPK GLDLRSLEEN LGRGLLTLPL RQQQCLFEEW FQFYATKGAE CPNLIRAFQV WWRRSFIRSL VEPQS

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.