Factsheet for Os04t0278000-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

nucleus 2
mitochondrion 4
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G119090.1	Barley	cytosol	24.86	83.44
OQU90655	Sorghum	mitochondrion	72.49	72.49
TraesCS4A01G349300.1	Wheat	mitochondrion	70.78	69.85
HORVU5Hr1G119100.2	Barley	cytosol	58.63	69.28
TraesCS5B01G523400.1	Wheat	mitochondrion	70.4	69.09
Zm00001d012880_P001	Maize	mitochondrion	66.22	68.57
Os07t0259700-01	Rice	mitochondrion	69.26	64.72
GSMUA_Achr7P03070_001	Banana	mitochondrion	58.82	59.39
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	56.74	57.83
KRH59568	Soybean	mitochondrion, plastid	45.16	46.39
KRH64045	Soybean	plastid	44.78	46.18
VIT_04s0044g01240.t01	Wine grape	nucleus	48.2	46.1
KRH53894	Soybean	plastid	43.64	45.73
Solyc11g005950.1.1	Tomato	cytosol, plastid	45.16	43.75
PGSC0003DMT400073782	Potato	cytosol, plastid	44.97	43.57
Os12t0188500-01	Rice	plastid	42.69	42.94
AT2G13690.1	Thale cress	cytosol, plastid	42.13	40.81
CDX71164	Canola	cytosol	34.91	38.33
Os12t0596600-01	Rice	cytosol	15.94	36.05
Os04t0579700-01	Rice	cytosol	29.6	29.27
Os07t0123500-01	Rice	cytosol	28.84	28.84
Os03t0769400-01	Rice	cytosol	28.08	28.35
Os03t0723600-01	Rice	mitochondrion	17.46	19.25

Protein Annotations

EMBL:AK120988	EnsemblPlants:Os04t0278000-01	EnsemblPlantsGene:Os04g0278000	EntrezGene:4335358	InterPro:BTB/POZ_dom_prot	PANTHER:PTHR31060
PANTHER:PTHR31060:SF27	ProteinID:BAF14270.1	ProteinID:BAS88357.1	RefSeq:XP_015637154.1	SEG:seg	UniParc:UPI0000DD8FB5
UniProt:Q0JEG7	MapMan:35.1	:	:	:	:

Description

Similar to PRLI-interacting factor G (Fragment). (Os04t0278000-01)

Coordinates

chr4:+:11743893..11747090

Molecular Weight (calculated)

58400.5 Da

IEP (calculated)

5.791

GRAVY (calculated)

-0.288

Length

527 amino acids

Sequence
(BLAST)

001: MADAAHHLRR RSSAALPRGW CCSFSATPQS PDHHRPLSAA SAAGGEGVGG GGARGKLPPK SPSVSLPSFQ SSPSSRLAGF IDPRRILSPG RVSPIDPDGS
101: PAVAAGANSE EDATPRPSVP FVAVREEREE EEGRGLDLKL CLRGRDGRSV AMELDSAVLC ESSAFFAAMA PPPEATVGGG SKRIEVDGVE NVEAFKETVE
201: LMFEADPMRW FVRAGVSRAI GVLEVSSSIM FDRGIKSCLE YIEAVPWNEN EEEKLKNLFA RCTFDEAVSK DVLARLKPQC QSISDDVTVH LIQSVTSSTN
301: TGARKEMQSL VNGLLSRSSV YQKDLSGLNK GSLYQICCSC LNSLVEHFTE DLCSDKIVRD SKPMIERVSK QTENLNWLFD ILVNNDMAEE FVELWAKQED
401: LISMHGQASA MFRYELSRIS ANVFIVLGKG KVQCPSDLRS QLFYGWFRPM LMDFGWLQRC SKGLDMRMLE ENLGQALLTL PLQQQQSLFE EWFQCFASRG
501: TECPNLSRAF QVWWRRSFVR SSLESRR

Best Arabidopsis Sequence Match ( AT2G13690.1 )
(BLAST)

001: MTMGDSDLRK PTNFGTGHLS RRRSWCCSFA VPPASPDTRS ISSRNHIPAK SQQQRPKLVP CSPQSSKSAL NIVNRIDPRR ILSPGRVSPI DSDPTVTTMQ
101: ETETTQEEED DAVVVDSTPN LRSESFRAPK IEVTGSGLSE GYDARLSLKG RNGGGVLVLE LSLEVLAANS DVFSGLIAEE KKCSSSSSSL GLKNTCRIEV
201: CDVENLGVFR ETVELMFEES NVIIKKFMTM GVYRAIDVLE VAAGIKFSRA VLSCLKYLEA VPWTEDEEEK LRRLLGIYSF DDDAVSEILA RFNSNETENL
301: QDSLSKKLVW SITSCSDVNP RNELKSLVKG LLCKSSVYEK EQPEINKEDI YRAGKCCVDS LAKLFEEGSS SSSSKKEKPL IESISREVEN INWLLEIMID
401: REIAEEFVEI WGKQRRLVEM HERVSPMVRY EVSRVTGAIF IAMGKRRVQC GGEARAGLVE AWFKPMLVDF GWLQRCKKGL DMREVEEGMG QTLLTLPVKE
501: QYQVFMEWFR WFSKHGTECP NLSKAFQIWW RRSFLRGVES STCR

Arabidopsis Description

PRL1-IFGBTB/POZ domain-containing protein At2g13690 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKH2]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.