Factsheet for TraesCS5B01G545100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G378100.1
TraesCS3A01G378200.1
TraesCS3B01G410900.1
TraesCS3D01G371400.1
TraesCS3D01G371500.1
TraesCS5A01G060900.1
TraesCS5A01G404600.1
TraesCS5B01G071200.2
TraesCS5B01G409500.1
TraesCS5D01G072400.2
TraesCS5D01G414700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54900.1	TraesCS5A01G060900.1	AT3G50780.1	21798944
AT3G54900.1	TraesCS5A01G404600.1	AT3G50780.1	21798944
AT3G54900.1	TraesCS5B01G071200.2	AT3G50780.1	21798944
AT3G54900.1	TraesCS5B01G409500.1	AT3G50780.1	21798944
AT3G54900.1	TraesCS5D01G072400.2	AT3G50780.1	21798944
AT3G54900.1	TraesCS5D01G414700.1	AT3G50780.1	21798944
AT3G54900.1	TraesCS3A01G378100.1	AT5G09830.1	21798944
AT3G54900.1	TraesCS3A01G378200.1	AT5G09830.1	21798944
AT3G54900.1	TraesCS3B01G410900.1	AT5G09830.1	21798944
AT3G54900.1	TraesCS3D01G371400.1	AT5G09830.1	21798944
AT3G54900.1	TraesCS3D01G371500.1	AT5G09830.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G542400.1	Wheat	plastid	93.94	95.09
TraesCS4A01G330300.1	Wheat	plastid	93.94	95.09
HORVU5Hr1G122340.1	Barley	plastid	90.91	76.92
KRH40339	Soybean	cytosol	7.88	76.47
Os03t0851200-01	Rice	nucleus, plastid	74.55	73.21
CDX73434	Canola	cytosol	34.55	73.08
EER93091	Sorghum	plastid	73.94	70.93
Zm00001d034857_P001	Maize	plastid	73.33	70.35
Zm00001d012845_P001	Maize	plastid	72.73	69.77
GSMUA_Achr6P15060_001	Banana	plastid	58.18	55.17
CDX78278	Canola	plastid	53.94	51.45
Solyc02g082200.2.1	Tomato	plastid	54.55	51.14
AT3G54900.1	Thale cress	plastid	53.33	50.87
PGSC0003DMT400035470	Potato	plastid	53.94	50.28
Bra007110.1-P	Field mustard	plastid	52.12	49.43
Bra003199.1-P	Field mustard	plastid	53.94	49.17
CDX67614	Canola	plastid	53.94	49.17
KRH00894	Soybean	plastid	52.73	49.15
CDY07516	Canola	plastid	52.73	48.07
KRH40338	Soybean	plastid	44.85	46.54
TraesCS5B01G152900.1	Wheat	plastid	36.36	20.76
TraesCS3B01G147100.1	Wheat	mitochondrion	26.06	19.55
TraesCS1B01G188000.1	Wheat	cytosol	36.36	12.27

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812	GO:GO:0008150
GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009941	GO:GO:0009987
GO:GO:0015035	GO:GO:0015297	GO:GO:0019725	GO:GO:0045454	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin
InterPro:IPR002109	InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF37
SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G545100	EnsemblPlants:TraesCS5B01G545100.1	TIGR:cd03028
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:697668411..697672815

Molecular Weight (calculated)

17567.2 Da

IEP (calculated)

8.055

GRAVY (calculated)

0.080

Length

165 amino acids

Sequence
(BLAST)

001: MAAAPSATAL AGAALPLPFS ARPQPARFSA VALPRTAPPP AALRLRTVRR LAAAEGGGVA AGMKDTLDKV VSAHKVVLFM KGTKDFPQCG FSHTVVQILR
101: SLDVPFETLD VLANDALRQG LKDYSSWPTF PQLYIDGEFF GGCDITLEAY KSGELQETLE KAMCS

Best Arabidopsis Sequence Match ( AT3G54900.1 )
(BLAST)

001: MALRSVKTPT LITSVAVVSS SVTNKPHSIR FSLKPTSALV VHNHQLSFYG SNLKLKPTKF RCSASALTPQ LKDTLEKLVN SEKVVLFMKG TRDFPMCGFS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS

Arabidopsis Description

GRXS14Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.