Factsheet for TraesCS5B01G152900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G159600.1	Wheat	plastid	98.27	98.27
EES16486	Sorghum	cytosol	46.37	91.16
HORVU5Hr1G048120.8	Barley	cytosol, plastid	97.92	88.71
Os12t0175500-01	Rice	plastid	81.66	82.81
EES09081	Sorghum	plastid	80.62	81.18
Zm00001d044606_P001	Maize	plastid	79.93	79.11
Zm00001d005094_P001	Maize	plastid	79.24	78.69
TraesCS5A01G154700.1	Wheat	mitochondrion	98.27	73.01
PGSC0003DMT400011370	Potato	plastid	61.59	60.14
VIT_08s0105g00490.t01	Wine grape	plastid	61.25	59.6
Solyc09g005620.2.1	Tomato	plastid	60.21	59.59
GSMUA_Achr5P14210_001	Banana	plastid	64.71	57.54
CDY14473	Canola	plastid	57.09	57.29
CDY07744	Canola	plastid	56.75	56.16
Bra000047.1-P	Field mustard	plastid	56.75	55.78
AT2G38270.1	Thale cress	plastid	56.4	55.63
KRH65709	Soybean	nucleus, plastid	56.4	55.25
KRH75953	Soybean	nucleus	55.36	50.0
TraesCS5B01G545100.1	Wheat	plastid	20.76	36.36
TraesCS3B01G147100.1	Wheat	mitochondrion	21.45	28.18
TraesCS1B01G188000.1	Wheat	cytosol	24.91	14.72

Protein Annotations

Gene3D:3.40.1440.10	Gene3D:3.40.30.10	MapMan:35.1	InterPro:GIY-YIG_endonuc_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536	GO:GO:0009570	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109
InterPro:IPR035901	InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF45
SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	EnsemblPlantsGene:TraesCS5B01G152900	EnsemblPlants:TraesCS5B01G152900.1	TIGR:cd03028
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:282045238..282046566

Molecular Weight (calculated)

31038.2 Da

IEP (calculated)

7.131

GRAVY (calculated)

-0.130

Length

289 amino acids

Sequence
(BLAST)

001: MTFPMATSTA STAAAASLRL LPVPATPSSS TLRFAPILRR APRALLSVSA LSKLSEASPV PIPQEPTQTL PDEDALPPRP GVYGVFDPAG DLQFLGISRN
101: VRASVEGHRR KVPADLCASV KVAIPDEETP DKSVLTNAWK SWMEEYIAAT GKAPPGNVAG NHTWIGPPQR PADLRLTPGR HVQLTVPLEQ LIDRLVKENK
201: VVAFIKGSRS APQCGFSQRV VGILEAHGVD FASVDILDEE HNHGLRETLK TYSNWPTFPQ VFVGGELVGG CDIISSMAEK GELAALFQK

Best Arabidopsis Sequence Match ( AT2G38270.1 )
(BLAST)

001: MAAITISSSL HASASPRVVR PHVSRNTPVI TLYSRFTPSF SFPSLSFTLR DTAPSRRRSF FIASAVKSLT ETELLPITEA DSIPSASGVY AVYDKSDELQ
101: FVGISRNIAA SVSAHLKSVP ELCGSVKVGI VEEPDKAVLT QAWKLWIEEH IKVTGKVPPG NKSGNNTFVK QTPRKKSDIR LTPGRHVELT VPLEELIDRL
201: VKESKVVAFI KGSRSAPQCG FSQRVVGILE SQGVDYETVD VLDDEYNHGL RETLKNYSNW PTFPQIFVKG ELVGGCDILT SMYENGELAN ILN

Arabidopsis Description

GRXS16Bifunctional monothiol glutaredoxin-S16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H7F6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.