CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16486	Sorghum	cytosol	50.87	99.32
Zm00001d044606_P001	Maize	plastid	89.9	88.36
Zm00001d005094_P001	Maize	plastid	89.55	88.32
Os12t0175500-01	Rice	plastid	82.93	83.51
TraesCS5B01G152900.1	Wheat	plastid	81.18	80.62
TraesCS5D01G159600.1	Wheat	plastid	80.14	79.58
HORVU5Hr1G048120.8	Barley	cytosol, plastid	80.49	72.41
VIT_08s0105g00490.t01	Wine grape	plastid	63.07	60.94
PGSC0003DMT400011370	Potato	plastid	61.32	59.46
TraesCS5A01G154700.1	Wheat	mitochondrion	80.49	59.38
Solyc09g005620.2.1	Tomato	plastid	60.28	59.25
CDY14473	Canola	plastid	57.49	57.29
CDY07744	Canola	plastid	57.14	56.16
AT2G38270.1	Thale cress	plastid	57.14	55.97
Bra000047.1-P	Field mustard	plastid	57.14	55.78
GSMUA_Achr5P14210_001	Banana	plastid	63.07	55.69
KRH65709	Soybean	nucleus, plastid	56.79	55.25
KRH75953	Soybean	nucleus	56.1	50.31
EER93091	Sorghum	plastid	21.25	35.47
KXG31737	Sorghum	mitochondrion	21.25	32.97
EES12336	Sorghum	mitochondrion	20.21	30.53
KXG38234	Sorghum	cytosol	24.39	14.03

Protein Annotations

Gene3D:3.40.1440.10	Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:8079960	UniProt:C5Y2Y5	EnsemblPlants:EES09081
ProteinID:EES09081	ProteinID:EES09081.1	InterPro:GIY-YIG_endonuc_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR035901	InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10293	PANTHER:PTHR10293:SF45	EnsemblPlantsGene:SORBI_3005G002900	SUPFAM:SSF52833	unigene:Sbi.6472	SignalP:SignalP-noTM
TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI0001A868D3	RefSeq:XP_002450093.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:234069..240167

Molecular Weight (calculated)

30947.0 Da

IEP (calculated)

8.340

GRAVY (calculated)

-0.200

Length

287 amino acids

Sequence
(BLAST)

001: MASTATAAVS LRLAFPLLST PACSASSSNT LRFPLRRRRA SRSLAVAAFK KLSEASPVAI PEEPTQPLVD EDALPPKPGV YGVYDPAGEL QFVGISRNVR
101: ASVEGHRRKV PANLCASVKV AVSDEETPDR AALNNAWKSW MQEHIEATGK APPGNVAGNN TWVGAPQRPP DLRLTPGRHV QLTVPLEQLI DRLVKENKVV
201: AFIKGSRSAP QCGFSQRVVG ILEAHGADFV TVDVLDEEHN HGLRETLKTY SNWPTFPQIF IGGELVGGCD IISSMAEKGE LAALFQK

Best Arabidopsis Sequence Match ( AT2G38270.1 )
(BLAST)

001: MAAITISSSL HASASPRVVR PHVSRNTPVI TLYSRFTPSF SFPSLSFTLR DTAPSRRRSF FIASAVKSLT ETELLPITEA DSIPSASGVY AVYDKSDELQ
101: FVGISRNIAA SVSAHLKSVP ELCGSVKVGI VEEPDKAVLT QAWKLWIEEH IKVTGKVPPG NKSGNNTFVK QTPRKKSDIR LTPGRHVELT VPLEELIDRL
201: VKESKVVAFI KGSRSAPQCG FSQRVVGILE SQGVDYETVD VLDDEYNHGL RETLKNYSNW PTFPQIFVKG ELVGGCDILT SMYENGELAN ILN

Arabidopsis Description

GRXS16Bifunctional monothiol glutaredoxin-S16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H7F6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.