Factsheet for GSMUA_Achr5P14210_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16486	Sorghum	cytosol	36.31	80.27
TraesCS5B01G152900.1	Wheat	plastid	57.54	64.71
TraesCS5D01G159600.1	Wheat	plastid	56.92	64.01
Os12t0175500-01	Rice	plastid	56.0	63.86
Zm00001d005094_P001	Maize	plastid	56.92	63.57
Zm00001d044606_P001	Maize	plastid	56.92	63.36
EES09081	Sorghum	plastid	55.69	63.07
VIT_08s0105g00490.t01	Wine grape	plastid	57.23	62.63
PGSC0003DMT400011370	Potato	plastid	55.69	61.15
Solyc09g005620.2.1	Tomato	plastid	54.77	60.96
KRH65709	Soybean	nucleus, plastid	53.85	59.32
HORVU5Hr1G048120.8	Barley	cytosol, plastid	57.54	58.62
AT2G38270.1	Thale cress	plastid	50.46	55.97
CDY14473	Canola	plastid	48.92	55.21
CDY07744	Canola	plastid	49.54	55.14
Bra000047.1-P	Field mustard	plastid	49.85	55.1
KRH75953	Soybean	nucleus	53.54	54.38
TraesCS5A01G154700.1	Wheat	mitochondrion	57.54	48.07
GSMUA_Achr6P15060_001	Banana	plastid	15.69	29.31
GSMUA_Achr10P...	Banana	mitochondrion	13.85	23.44
GSMUA_Achr7P08380_001	Banana	plastid	15.69	18.75
GSMUA_Achr8P11270_001	Banana	cytosol	21.85	16.17
GSMUA_Achr2P10580_001	Banana	cytosol	22.46	15.15

Protein Annotations

Gene3D:3.40.1440.10	Gene3D:3.40.30.10	MapMan:35.1	InterPro:GIY-YIG_endonuc_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GRX_PICOT-like	EnsemblPlantsGene:GSMUA_Achr5G14210_001	EnsemblPlants:GSMUA_Achr5P14210_001	EnsemblPlants:GSMUA_Achr5T14210_001	InterPro:Glutaredoxin
InterPro:IPR002109	InterPro:IPR035901	UniProt:M0SYF0	InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354
PANTHER:PTHR10293	PANTHER:PTHR10293:SF45	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf	UniParc:UPI000295BF3C	SEG:seg

Description

Monothiol glutaredoxin-S12, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr5G14210_001]

Coordinates

chr5:-:10204977..10208229

Molecular Weight (calculated)

35237.4 Da

IEP (calculated)

8.928

GRAVY (calculated)

-0.166

Length

325 amino acids

Sequence
(BLAST)

001: MIEAPQARVM VATMASSPHS LFSALRSLPS PPPPRSRSLK TFALVSSPSS SCFASVSCIY RPSGLRFPLT PPKKRALRRA SASTPFVAAA LGKLSDAELV
101: PVPKGPGELD GKFPSGAGVY GVYDKEGDLQ FIGISRDIAS SIASHSKFVP DLCHSVKVSL IDEVEPDRTV LTNAWKSWME EHISATGKVP PGNESGNNTW
201: VRRPQKKPDL RLMPGRNVQL TVPLEQLIDR LVKEKKVVAF IKGSRSAPLC GFSQRVIGIL EAHGIDYESV DVLDEEYNYG LREALKSYSN WPTFPQVFAN
301: GELVGGCDII SSMAETGELA SLLQK

Best Arabidopsis Sequence Match ( AT2G38270.1 )
(BLAST)

001: MAAITISSSL HASASPRVVR PHVSRNTPVI TLYSRFTPSF SFPSLSFTLR DTAPSRRRSF FIASAVKSLT ETELLPITEA DSIPSASGVY AVYDKSDELQ
101: FVGISRNIAA SVSAHLKSVP ELCGSVKVGI VEEPDKAVLT QAWKLWIEEH IKVTGKVPPG NKSGNNTFVK QTPRKKSDIR LTPGRHVELT VPLEELIDRL
201: VKESKVVAFI KGSRSAPQCG FSQRVVGILE SQGVDYETVD VLDDEYNHGL RETLKNYSNW PTFPQIFVKG ELVGGCDILT SMYENGELAN ILN

Arabidopsis Description

GRXS16Bifunctional monothiol glutaredoxin-S16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H7F6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.