Factsheet for HORVU5Hr1G048120.8

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G152900.1	Wheat	plastid	88.71	97.92
TraesCS5D01G159600.1	Wheat	plastid	88.09	97.23
EES16486	Sorghum	cytosol	42.01	91.16
Os12t0175500-01	Rice	plastid	73.04	81.75
EES09081	Sorghum	plastid	72.41	80.49
Zm00001d044606_P001	Maize	plastid	72.1	78.77
Zm00001d005094_P001	Maize	plastid	71.16	78.01
TraesCS5A01G154700.1	Wheat	mitochondrion	94.98	77.89
PGSC0003DMT400011370	Potato	plastid	56.43	60.81
Solyc09g005620.2.1	Tomato	plastid	55.17	60.27
VIT_08s0105g00490.t01	Wine grape	plastid	55.17	59.26
CDY14473	Canola	plastid	52.35	57.99
GSMUA_Achr5P14210_001	Banana	plastid	58.62	57.54
CDY07744	Canola	plastid	52.04	56.85
Bra000047.1-P	Field mustard	plastid	52.04	56.46
AT2G38270.1	Thale cress	plastid	51.72	56.31
KRH65709	Soybean	nucleus, plastid	50.78	54.92
KRH75953	Soybean	nucleus	50.16	50.0
HORVU5Hr1G122340.1	Barley	plastid	18.5	30.26
HORVU3Hr1G023970.2	Barley	cytosol	20.69	25.48

Protein Annotations

Gene3D:3.40.1440.10	Gene3D:3.40.30.10	MapMan:35.1	UniProt:A0A287R3H1	InterPro:GIY-YIG_endonuc_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	EnsemblPlantsGene:HORVU5Hr1G048120	EnsemblPlants:HORVU5Hr1G048120.8
InterPro:IPR002109	InterPro:IPR035901	InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293
PANTHER:PTHR10293:SF45	SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI000B480508	SEG:seg

Description

No Description!

Coordinates

chrchr5H:-:373843620..373852563

Molecular Weight (calculated)

34494.5 Da

IEP (calculated)

8.120

GRAVY (calculated)

-0.160

Length

319 amino acids

Sequence
(BLAST)

001: LERKNARLDD IIVSTLHTPP PHLLLLSRAT MTFPMATSTA STAAAASLRI LPAPATPSSR TLRFPPILRR APRALLSVSA LSKLSEASPV PIPQEPTQTL
101: PDEDSIPPRP GVYGVFDPAG DLQFLGISRN VRASVEGHRR KVPADLCASV KVAIPDEETP DKSVLTNAWK SWMEEYIAAT GKAPPGNVAG NHTWIGPPQR
201: PADLRLTPGR HVQLTVPLEQ LIDRLVKENK VVAFIKGSRS APQCGFSQRV VGILEAHGVD FASVDILDEE HNHGLRETLK TYSNWPTFPQ VFVGGELVGG
301: CDIISSMAEK GELAALFQK

Best Arabidopsis Sequence Match ( AT2G38270.1 )
(BLAST)

001: MAAITISSSL HASASPRVVR PHVSRNTPVI TLYSRFTPSF SFPSLSFTLR DTAPSRRRSF FIASAVKSLT ETELLPITEA DSIPSASGVY AVYDKSDELQ
101: FVGISRNIAA SVSAHLKSVP ELCGSVKVGI VEEPDKAVLT QAWKLWIEEH IKVTGKVPPG NKSGNNTFVK QTPRKKSDIR LTPGRHVELT VPLEELIDRL
201: VKESKVVAFI KGSRSAPQCG FSQRVVGILE SQGVDYETVD VLDDEYNHGL RETLKNYSNW PTFPQIFVKG ELVGGCDILT SMYENGELAN ILN

Arabidopsis Description

GRXS16Bifunctional monothiol glutaredoxin-S16, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H7F6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.