Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G128900.1 | Wheat | mitochondrion | 65.64 | 91.89 |
| TraesCS3A01G127900.1 | Wheat | mitochondrion | 66.41 | 91.01 |
| TraesCS3B01G147100.1 | Wheat | mitochondrion | 68.34 | 80.45 |
| Os01t0174900-01 | Rice | mitochondrion | 50.58 | 70.81 |
| Os01t0530400-01 | Rice | mitochondrion | 49.42 | 69.19 |
| EES12336 | Sorghum | mitochondrion | 50.58 | 68.95 |
| Zm00001d025657_P001 | Maize | mitochondrion | 47.88 | 64.25 |
| KRH09770 | Soybean | cytosol | 12.36 | 60.38 |
| CDY30094 | Canola | mitochondrion | 33.98 | 53.33 |
| AT3G15660.1 | Thale cress | mitochondrion | 34.36 | 52.66 |
| CDY21857 | Canola | mitochondrion | 33.59 | 52.1 |
| Bra027220.1-P | Field mustard | mitochondrion | 34.36 | 52.05 |
| CDX97692 | Canola | mitochondrion | 34.36 | 52.05 |
| KRH44417 | Soybean | cytosol, plastid | 32.05 | 51.55 |
| Bra021125.1-P | Field mustard | mitochondrion | 33.2 | 51.5 |
| KRH23549 | Soybean | mitochondrion | 32.05 | 51.23 |
| PGSC0003DMT400073383 | Potato | mitochondrion | 33.59 | 51.18 |
| VIT_09s0002g06040.t01 | Wine grape | mitochondrion | 33.59 | 51.18 |
| CDY20141 | Canola | mitochondrion | 32.82 | 50.9 |
| Solyc06g067960.2.1 | Tomato | plastid | 33.2 | 50.59 |
| KRH47491 | Soybean | cytosol, plastid | 31.27 | 50.31 |
| GSMUA_Achr10P... | Banana | mitochondrion | 36.29 | 48.96 |
| GSMUA_Achr7P08380_001 | Banana | plastid | 43.63 | 41.54 |
| HORVU5Hr1G122340.1 | Barley | plastid | 17.76 | 23.59 |
| HORVU5Hr1G048120.8 | Barley | cytosol, plastid | 25.48 | 20.69 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | UniProt:A0A287KFW7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0015035 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055114 | InterPro:GRX_PICOT-like |
| InterPro:Glutaredoxin | EnsemblPlantsGene:HORVU3Hr1G023970 | EnsemblPlants:HORVU3Hr1G023970.2 | InterPro:IPR002109 | InterPro:Monothiol_GRX-rel | PFAM:PF00462 |
| PFscan:PS51354 | PANTHER:PTHR10293 | PANTHER:PTHR10293:SF54 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf |
| UniParc:UPI000B4795E0 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:90197110..90200196
Molecular Weight (calculated)
27984.1 Da
IEP (calculated)
8.816
GRAVY (calculated)
-0.305
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: ALRACTARSC GILTEQHIVV DWSRTVLEGS AAAVAATATP YPSASHERRR PQRPCCLHSA RNLSPLGFKS VQGNMARLVS SSLVRGLVRS CRASSTAAVS
101: RPAFQQFMTY SSGISGDSNV NGGTSTTRVT ADSDTHQDFQ PTSKDSDMSL QDIVAQDIKE NPVIIYMKGH PQAPRCGFSA LAVKVLQQYG VSITSRDILT
201: NMKLKESVKA YSNWPTFPQI FINGEFVGGS DIILSMHQKG ELKELLGDSA QKGEQDSTQ
101: RPAFQQFMTY SSGISGDSNV NGGTSTTRVT ADSDTHQDFQ PTSKDSDMSL QDIVAQDIKE NPVIIYMKGH PQAPRCGFSA LAVKVLQQYG VSITSRDILT
201: NMKLKESVKA YSNWPTFPQI FINGEFVGGS DIILSMHQKG ELKELLGDSA QKGEQDSTQ
001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD
Arabidopsis Description
GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.