Factsheet for Zm00001d025657_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

mitochondrion: 27297264
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005151_P004
Zm00001d007121_P024
Zm00001d010490_P005
Zm00001d018301_P001
Zm00001d022481_P019
Zm00001d029134_P004
Zm00001d029179_P001
Zm00001d034851_P001
Zm00001d035282_P001
Zm00001d037282_P001
Zm00001d042264_P006
Zm00001d042726_P001
Zm00001d052721_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15660.1	Zm00001d007121_P024	AT4G15730.1	21798944
AT3G15660.1	Zm00001d010490_P005	AT4G15730.1	21798944
AT3G15660.1	Zm00001d022481_P019	AT4G15730.1	21798944
AT3G15660.1	Zm00001d029134_P004	AT4G15730.1	21798944
AT3G15660.1	Zm00001d042726_P001	AT5G09830.1	21798944
AT3G15660.1	Zm00001d005151_P004	AT5G13280.1	21798944
AT3G15660.1	Zm00001d018301_P001	AT5G13280.1	21798944
AT3G15660.1	Zm00001d029179_P001	AT5G13280.1	21798944
AT3G15660.1	Zm00001d034851_P001	AT5G13280.1	21798944
AT3G15660.1	Zm00001d035282_P001	AT5G13280.1	21798944
AT3G15660.1	Zm00001d037282_P001	AT5G13280.1	21798944
AT3G15660.1	Zm00001d042264_P006	AT5G13280.1	21798944
AT3G15660.1	Zm00001d052721_P001	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12336	Sorghum	mitochondrion	86.53	87.89
Zm00001d008736_P001	Maize	mitochondrion	58.55	67.66
TraesCS3D01G128900.1	Wheat	mitochondrion	64.77	67.57
TraesCS3A01G127900.1	Wheat	mitochondrion	64.77	66.14
KRH09770	Soybean	cytosol	15.54	56.6
TraesCS3B01G147100.1	Wheat	mitochondrion	63.73	55.91
KRH23549	Soybean	mitochondrion	41.45	49.38
GSMUA_Achr10P...	Banana	mitochondrion	47.67	47.92
HORVU3Hr1G023970.2	Barley	cytosol	64.25	47.88
KRH44417	Soybean	cytosol, plastid	38.86	46.58
CDY30094	Canola	mitochondrion	39.38	46.06
KRH47491	Soybean	cytosol, plastid	38.34	45.96
VIT_09s0002g06040.t01	Wine grape	mitochondrion	40.41	45.88
AT3G15660.1	Thale cress	mitochondrion	39.9	45.56
PGSC0003DMT400073383	Potato	mitochondrion	39.38	44.71
Solyc06g067960.2.1	Tomato	plastid	38.86	44.12
CDX97692	Canola	mitochondrion	38.86	43.86
Bra027220.1-P	Field mustard	mitochondrion	38.86	43.86
Bra021125.1-P	Field mustard	mitochondrion	37.82	43.71
CDY21857	Canola	mitochondrion	37.82	43.71
CDY20141	Canola	mitochondrion	37.82	43.71
GSMUA_Achr7P08380_001	Banana	plastid	51.3	36.4
Zm00001d012845_P001	Maize	plastid	19.69	22.09
Zm00001d034857_P001	Maize	plastid	18.65	20.93
Zm00001d005094_P001	Maize	plastid	28.5	18.9
Zm00001d044606_P001	Maize	plastid	27.98	18.49
Zm00001d006437_P001	Maize	cytosol	23.32	14.38
Zm00001d032546_P001	Maize	extracellular	27.98	10.82
Zm00001d013927_P001	Maize	extracellular	27.46	10.62
Zm00001d011577_P001	Maize	cytosol	23.83	9.41
Zm00001d006222_P001	Maize	cytosol	20.21	7.82
Zm00001d016478_P001	Maize	cytosol	9.84	6.17

Protein Annotations

EntrezGene:100280180	Gene3D:3.40.30.10	MapMan:35.1	ProteinID:AQK44188.1	UniProt:B6TEC7	EMBL:BT055721
EMBL:EU963342	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725
GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109
InterPro:Monothiol_GRX-rel	PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF54	SUPFAM:SSF52833
InterPro:Thioredoxin-like_sf	UniParc:UPI000182CF15	EnsemblPlantsGene:Zm00001d025657	EnsemblPlants:Zm00001d025657_P001	EnsemblPlants:Zm00001d025657_T001	:

Description

Monothiol glutaredoxin-S15 mitochondrial

Coordinates

chr10:-:125211002..125215631

Molecular Weight (calculated)

21257.4 Da

IEP (calculated)

6.952

GRAVY (calculated)

-0.333

Length

193 amino acids

Sequence
(BLAST)

001: MGTMKRLVST ALAARGLLRS HGLPTTTSVM YQPAFQQFMN YSSPHGGDPN ANTNSTTTRI AADPDTHQDF EPKSRISDMT LHDAIAQDIK ENPVLIYMKG
101: FPESPMCGFS ALAVKVFQQY GVPVCGRDIL GDLKLKECVK AHTNWPTFPQ IFIKGEFVGG SDIILSLHQK GELKDLLGDI AQRDEQKVHA HDS

Best Arabidopsis Sequence Match ( AT3G15660.2 )
(BLAST)

001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD

Arabidopsis Description

GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.