Factsheet for Zm00001d013927_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005151_P004
Zm00001d018301_P001
Zm00001d029179_P001
Zm00001d034851_P001
Zm00001d035282_P001
Zm00001d037282_P001
Zm00001d042264_P006
Zm00001d042726_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	Zm00001d042726_P001	AT5G09830.1	21798944
AT4G04950.1	Zm00001d005151_P004	AT5G13280.1	21798944
AT4G04950.1	Zm00001d018301_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d029179_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d034851_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d035282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d037282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d042264_P006	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006437_P001	Maize	cytosol	60.52	96.49
KXG38234	Sorghum	cytosol	95.19	95.19
Zm00001d032546_P001	Maize	extracellular	93.39	93.39
Os10t0500700-01	Rice	cytosol	87.37	88.8
TraesCS1D01G166900.1	Wheat	cytosol	84.37	86.09
TraesCS1A01G168900.1	Wheat	cytosol	84.17	85.89
TraesCS1B01G188000.1	Wheat	cytosol	83.37	85.07
Zm00001d016478_P001	Maize	cytosol	51.5	83.44
GSMUA_Achr2P10580_001	Banana	cytosol	71.54	74.07
GSMUA_Achr8P11270_001	Banana	cytosol	64.53	73.35
CDY16635	Canola	cytosol	43.49	70.68
Bra029532.1-P	Field mustard	cytosol	47.09	69.32
CDY67888	Canola	cytosol	48.7	69.03
Zm00001d011577_P001	Maize	cytosol	67.54	68.92
Bra000810.1-P	Field mustard	cytosol	65.33	68.49
CDX90882	Canola	cytosol	65.33	68.34
AT4G04950.1	Thale cress	cytosol	66.33	67.83
KRH20463	Soybean	nucleus	65.73	66.94
VIT_10s0597g00030.t01	Wine grape	cytosol	65.93	66.87
CDY21322	Canola	cytosol	65.33	64.17
Zm00001d006222_P001	Maize	cytosol	63.13	63.13
Solyc02g078360.2.1	Tomato	cytosol	37.07	62.5
AT4G32580.1	Thale cress	cytosol	19.44	60.62
Zm00001d034857_P001	Maize	plastid	12.83	37.21
Zm00001d012845_P001	Maize	plastid	12.22	35.47
Zm00001d008736_P001	Maize	mitochondrion	11.22	33.53
Zm00001d025657_P001	Maize	mitochondrion	10.62	27.46
Zm00001d005094_P001	Maize	plastid	14.03	24.05
Zm00001d044606_P001	Maize	plastid	13.63	23.29

Protein Annotations

EntrezGene:100272720	Gene3D:3.40.30.10	MapMan:35.1	ProteinID:AQK64823.1	UniProt:B4FQ54	EMBL:BT039242
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR013766
InterPro:Monothiol_GRX-rel	PFAM:PF00085	PFAM:PF00462	PFscan:PS51352	PFscan:PS51354	SUPFAM:SSF52833
TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI00017B7A84	EnsemblPlantsGene:Zm00001d013927	EnsemblPlants:Zm00001d013927_P001
EnsemblPlants:Zm00001d013927_T001	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S17

Coordinates

chr5:-:25004008..25010095

Molecular Weight (calculated)

53875.2 Da

IEP (calculated)

4.803

GRAVY (calculated)

-0.197

Length

499 amino acids

Sequence
(BLAST)

001: MASGGAVRDV GSPAELEAAV AGARAVAVHF WASWCEASKQ MDEVFAHLAV DFPHAAFLRV EAEEQPEISE AYGVTAVPYF VFCKEGKIVD TLEGVNPASL
101: ANKVAKVAGP ASVAESAVPA SLGVAAGPAV LENIQKMAQQ NGSSAAESTN SGSTQDALNK RLEQLVNSHP VFLFMKGTPE QPRCGFSRKV VNILKQEGVE
201: FGSFDILTDN DVREGMKKFS NWPTFPQLYC KGELLGGCDI VIAMHDSGEL KDVFEEHNIP LKPQGSKNEE AGQPESATEK GAAVAEPMGL TDAQKSRLES
301: LINSSPVMVF IKGTPEEPKC GFSGKLVHIL KQENIPFSSF DILSDDEVRQ GLKVLSNWPS YPQLYIKGEL VGGSDIVMEM HKSGELKKVL SEKGVIPKES
401: LEDRLKSLVS SAPVMLFMKG TPDAPRCGFS SKVVNALKKE GVSFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELIGG CDIVLEMEKS GELKSTLSE

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.