Factsheet for TraesCS1B01G188000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G378100.1
TraesCS3A01G378200.1
TraesCS3A01G442100.2
TraesCS3B01G410900.1
TraesCS3B01G475900.2
TraesCS3D01G371400.1
TraesCS3D01G371500.1
TraesCS3D01G434800.1
TraesCS4A01G337800.1
TraesCS5B01G547400.1
TraesCS5B01G550800.1
TraesCS5D01G487000.2
TraesCS5D01G534600.1
TraesCS7B01G461700.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	TraesCS3A01G378100.1	AT5G09830.1	21798944
AT4G04950.1	TraesCS3A01G378200.1	AT5G09830.1	21798944
AT4G04950.1	TraesCS3B01G410900.1	AT5G09830.1	21798944
AT4G04950.1	TraesCS3D01G371400.1	AT5G09830.1	21798944
AT4G04950.1	TraesCS3D01G371500.1	AT5G09830.1	21798944
AT4G04950.1	TraesCS3A01G442100.2	AT5G13280.1	21798944
AT4G04950.1	TraesCS3B01G475900.2	AT5G13280.1	21798944
AT4G04950.1	TraesCS3D01G434800.1	AT5G13280.1	21798944
AT4G04950.1	TraesCS4A01G337800.1	AT5G13280.1	21798944
AT4G04950.1	TraesCS5B01G547400.1	AT5G13280.1	21798944
AT4G04950.1	TraesCS5B01G550800.1	AT5G13280.1	21798944
AT4G04950.1	TraesCS5D01G487000.2	AT5G13280.1	21798944
AT4G04950.1	TraesCS5D01G534600.1	AT5G13280.1	21798944
AT4G04950.1	TraesCS7B01G461700.1	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G166900.1	Wheat	cytosol	95.91	95.91
TraesCS1A01G168900.1	Wheat	cytosol	95.5	95.5
Os10t0500700-01	Rice	cytosol	85.69	85.34
Zm00001d013927_P001	Maize	extracellular	85.07	83.37
Zm00001d032546_P001	Maize	extracellular	83.84	82.16
KXG38234	Sorghum	cytosol	83.84	82.16
Zm00001d006437_P001	Maize	cytosol	52.56	82.11
GSMUA_Achr2P10580_001	Banana	cytosol	70.96	71.99
Zm00001d016478_P001	Maize	cytosol	44.99	71.43
CDY16635	Canola	cytosol	44.58	71.01
Bra029532.1-P	Field mustard	cytosol	48.26	69.62
GSMUA_Achr8P11270_001	Banana	cytosol	62.17	69.25
AT4G04950.1	Thale cress	cytosol	68.92	69.06
CDY67888	Canola	cytosol	49.49	68.75
CDX90882	Canola	cytosol	66.46	68.13
Bra000810.1-P	Field mustard	cytosol	66.26	68.07
KRH20463	Soybean	nucleus	67.28	67.14
VIT_10s0597g00030.t01	Wine grape	cytosol	67.08	66.67
Solyc02g078360.2.1	Tomato	cytosol	39.06	64.53
CDY21322	Canola	cytosol	66.87	64.37
AT4G32580.1	Thale cress	cytosol	19.22	58.75
Zm00001d011577_P001	Maize	cytosol	58.69	58.69
Zm00001d006222_P001	Maize	cytosol	56.03	54.91
TraesCS5B01G545100.1	Wheat	plastid	12.27	36.36
TraesCS3B01G147100.1	Wheat	mitochondrion	11.86	26.36
TraesCS5B01G152900.1	Wheat	plastid	14.72	24.91

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0009055
GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0045454	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin
InterPro:IPR002109	InterPro:IPR013766	InterPro:Monothiol_GRX-rel	PFAM:PF00085	PFAM:PF00462	PFscan:PS51352
PFscan:PS51354	SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	EnsemblPlantsGene:TraesCS1B01G188000
EnsemblPlants:TraesCS1B01G188000.1	TIGR:cd02984	TIGR:cd03028	SEG:seg	:	:

Description

No Description!

Coordinates

chr1B:+:336207098..336210243

Molecular Weight (calculated)

53150.5 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.220

Length

489 amino acids

Sequence
(BLAST)

001: MASGGGAVRE VGSKAELDEA VGGARAAAVH FWAAWCEASK QMDEVFAHLA VDFPHALFLR VEAEEQPEIS EAYGVTAVPY FVFCKEGKPV DTLEGANPAS
101: LANKVAKLAG PANVAESAAP ASLGVAAGPA VLEKVQEMAR QNGSSASEST LKKRLEQLVN SHPVILFMKG NPEEPRCGFS RKVVDILKQE GVEFGSFDIL
201: TDNEVREGLK KFSNWPTFPQ LYCKGELLGG CDIVIAMHES GELKDVMKEH NIPLRQQGSK IEEPVISESA NEQSTEAIGL TEAQKARLES LTNSNSVMIF
301: IKGSPEEPKC GFSGKVVHIL KQEKIPFSSF DILTDDEVRQ GLKVLSNWPS YPQVYIKGEL VGGSDVVMEM HKSGELKKVL TEKGIIQQES LEDRLKALIS
401: SSPVMLFMKG NPDNPRCGFS SEVVNALRGA GISFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELMGG CDIVLELKKS GELKATLSE

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.