Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G168900.1 | Wheat | cytosol | 98.16 | 98.16 |
| TraesCS1B01G188000.1 | Wheat | cytosol | 95.91 | 95.91 |
| Os10t0500700-01 | Rice | cytosol | 85.07 | 84.73 |
| Zm00001d013927_P001 | Maize | extracellular | 86.09 | 84.37 |
| Zm00001d006437_P001 | Maize | cytosol | 53.58 | 83.71 |
| KXG38234 | Sorghum | cytosol | 84.87 | 83.17 |
| Zm00001d032546_P001 | Maize | extracellular | 84.46 | 82.77 |
| Zm00001d016478_P001 | Maize | cytosol | 45.4 | 72.08 |
| GSMUA_Achr2P10580_001 | Banana | cytosol | 70.96 | 71.99 |
| CDY16635 | Canola | cytosol | 44.58 | 71.01 |
| GSMUA_Achr8P11270_001 | Banana | cytosol | 63.19 | 70.39 |
| Bra029532.1-P | Field mustard | cytosol | 48.26 | 69.62 |
| AT4G04950.1 | Thale cress | cytosol | 68.71 | 68.85 |
| CDY67888 | Canola | cytosol | 49.49 | 68.75 |
| Bra000810.1-P | Field mustard | cytosol | 66.67 | 68.49 |
| CDX90882 | Canola | cytosol | 66.67 | 68.34 |
| VIT_10s0597g00030.t01 | Wine grape | cytosol | 67.28 | 66.87 |
| KRH20463 | Soybean | nucleus | 66.05 | 65.92 |
| CDY21322 | Canola | cytosol | 66.87 | 64.37 |
| Solyc02g078360.2.1 | Tomato | cytosol | 38.65 | 63.85 |
| Zm00001d011577_P001 | Maize | cytosol | 59.71 | 59.71 |
| AT4G32580.1 | Thale cress | cytosol | 19.43 | 59.38 |
| Zm00001d006222_P001 | Maize | cytosol | 56.65 | 55.51 |
| TraesCS5D01G542400.1 | Wheat | plastid | 11.86 | 35.58 |
| TraesCS3D01G128900.1 | Wheat | mitochondrion | 11.86 | 31.35 |
| TraesCS5D01G159600.1 | Wheat | plastid | 14.72 | 24.91 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0009055 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | InterPro:GRX_PICOT-like | InterPro:Glutaredoxin |
| InterPro:IPR002109 | InterPro:IPR013766 | InterPro:Monothiol_GRX-rel | PFAM:PF00085 | PFAM:PF00462 | PFscan:PS51352 |
| PFscan:PS51354 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | EnsemblPlantsGene:TraesCS1D01G166900 |
| EnsemblPlants:TraesCS1D01G166900.1 | TIGR:cd02984 | TIGR:cd03028 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1D:-:238069360..238072417
Molecular Weight (calculated)
53254.6 Da
IEP (calculated)
4.924
GRAVY (calculated)
-0.231
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGGGAVRE VGSRAELDAA VGGARAAAVH FWASWCEASK QMDEVFAHLA VDFPHALFLR VEAEEQPEIS EAYGVTAVPY FVFCKEGKPV DTLEGANPAS
101: LANKVAKLAG PANVAQSAAP ASLGVAAGPA VLEKVQEMAR QNGSSDAEST LKKRLEQLVN SHPVILFMKG NPEEPRCGFS RRVVDILKQE GVEFGSFDIL
201: TDNEVREGLK KFSNWPTFPQ LYCKGELLGG CDIVIAMHES GELKDVLREH NIPLRQQGSK IEEPVMSESA NEQSPEAIGL TEAQKARLES LTNSNPVMIF
301: IKGSPEEPKC GFSGKVVHIL KQEKIPFSSF DILSDDEVRQ GLKVLSNWPS YPQVYIKGEL VGGSDIVMEM HKSGELKKVL TEKGIIRRES LEDRLEALIS
401: SSPVMLFMKG NPDNPRCGFS SKVVNALKGA GISFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELMGG CDIVLELEKS GELKATLSE
101: LANKVAKLAG PANVAQSAAP ASLGVAAGPA VLEKVQEMAR QNGSSDAEST LKKRLEQLVN SHPVILFMKG NPEEPRCGFS RRVVDILKQE GVEFGSFDIL
201: TDNEVREGLK KFSNWPTFPQ LYCKGELLGG CDIVIAMHES GELKDVLREH NIPLRQQGSK IEEPVMSESA NEQSPEAIGL TEAQKARLES LTNSNPVMIF
301: IKGSPEEPKC GFSGKVVHIL KQEKIPFSSF DILSDDEVRQ GLKVLSNWPS YPQVYIKGEL VGGSDIVMEM HKSGELKKVL TEKGIIRRES LEDRLEALIS
401: SSPVMLFMKG NPDNPRCGFS SKVVNALKGA GISFGSFDIL SDEEVRQGLK TYSNWPTFPQ LYYKSELMGG CDIVLELEKS GELKATLSE
001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE
Arabidopsis Description
GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.