Factsheet for TraesCS5D01G534600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G074100.1
TraesCSU01G086500.1
TraesCSU01G123400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G123400.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G337800.1	Wheat	plastid	95.05	96.59
HORVU5Hr1G121250.1	Barley	plastid	95.05	95.9
TraesCS5D01G487000.2	Wheat	plastid	94.35	95.02
Os03t0850400-01	Rice	cytosol, mitochondrion, plastid	82.51	86.96
EER93093	Sorghum	plastid	84.63	84.63
Zm00001d034851_P001	Maize	plastid	62.9	83.57
GSMUA_AchrUn_...	Banana	vacuole	18.02	76.69
KRH70062	Soybean	plastid	72.08	72.6
KRH08407	Soybean	plastid	71.73	71.86
Solyc01g005240.2.1	Tomato	plastid	71.38	71.5
VIT_01s0244g00140.t01	Wine grape	plastid	72.26	71.38
TraesCS3D01G434800.1	Wheat	plastid	71.2	71.33
CDX78557	Canola	plastid	67.31	70.95
Bra006235.1-P	Field mustard	plastid	67.31	70.95
KRH06839	Soybean	plastid	69.96	70.59
KRG94687	Soybean	plastid	69.79	70.28
AT5G14060.1	Thale cress	plastid	67.49	70.22
AT5G13280.1	Thale cress	plastid	70.32	69.95
CDX70538	Canola	plastid	66.96	69.41
AT3G02020.1	Thale cress	plastid	68.02	68.87
CDY09781	Canola	plastid	66.61	68.55
Bra023401.1-P	Field mustard	plastid	66.96	68.41
CDX85659	Canola	plastid	66.96	68.41
CDX69652	Canola	plastid	66.43	68.24
Bra008840.1-P	Field mustard	plastid	66.43	68.24
CDX91135	Canola	plastid	66.61	67.93
PGSC0003DMT400058635	Potato	cytosol	68.02	66.15
CDY06621	Canola	plastid	65.55	64.41
CDY20797	Canola	plastid	65.55	64.19
Bra035544.1-P	Field mustard	plastid	65.19	63.84
VIT_14s0068g01190.t01	Wine grape	cytosol	73.67	63.76
CDX70539	Canola	mitochondrion	9.89	60.22
TraesCS5D01G181600.4	Wheat	plastid	26.68	16.5
Solyc11g040380.1.1	Tomato	plastid	1.94	9.57
TraesCS5D01G149900.1	Wheat	mitochondrion, vacuole	3.18	4.68

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR002912
InterPro:IPR036393	PFAM:PF00696	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR21499	PANTHER:PTHR21499:SF40
SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	EnsemblPlantsGene:TraesCS5D01G534600	EnsemblPlants:TraesCS5D01G534600.1	TIGR:cd04244
TIGR:cd04918	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:548879038..548884631

Molecular Weight (calculated)

60875.6 Da

IEP (calculated)

7.417

GRAVY (calculated)

0.114

Length

566 amino acids

Sequence
(BLAST)

001: MVAALRLAAV AWDSPTAVSA SRLGRERASL CAAARPGGQC CARRGLVLRC QSGGGAAATA ATLKKGEAAD AAGFTVVMKF GGSSVSSAAR MREMADLILS
101: FPEERPVVVL SAMGKTTNNL LLAGEKAVSC GAPKASEINE LAVIKELHLR TIDELGLDSS IVSGFLDELE QLLKGVAMMK ELTLRTRDYL VSFGECMSTR
201: IFAAYLNKLG KKARQYDAFD LGFITTDDFT NADILEATYP AVAKRLHGDW IDDPAIPVVT GFLGKGWKSC AVTTLGRGGS DLTATTIGKA LGLREIQVWK
301: DVDGVLTCDP NIYANAVPVP YLTFDEAAEL AYFGAQVLHP QSMRPAREGG IPVRVKNSYN RHAPGTVITK TRDMRKSILT SIVLKSNITM LDIVSTRMLG
401: QYGFLAKVFS AKVFSIFEDL GISVDSVATS EVSISLTLDP SKLWSRELIQ QELDNVVEEL EKIAVVHLLQ HRSIISLIGN VQRSSLILEK AFNVLRRNGV
501: NVQMISQGAS KVNISLVVND SEAKQCVQAL HSAFFENGFL SEVEEADLAQ NRVPVLVSSN GAINGN

Best Arabidopsis Sequence Match ( AT3G02020.1 )
(BLAST)

001: MAASMQFYGV KTPELALNSK RIEFSSKGLN FSALVSSARV FSRNVDRSCK NIALRVTCEA GRVELLERKA SETFKLNKTE KKLTCVMKFG GSSVASAERM
101: IQVAKLILSF PDEKPVVVLS AMAKTTNKLL MAGEKAVCCG VTNVDTIEEL SYIKELHIRT AHELGVETAV IAEHLEGLEQ LLKGVAMMKE LTLRSRDYLV
201: SFGECMSTRL FAAYLNKIGH KARQYDAFEI GIITTDDFTN ADILEATYPA VSKKLLGDWS KENALPVVTG FLGKGWRSCA VTTLGRGGSD LTATTIGKAL
301: GLREIQVWKD VDGVLTCDPN IYCGAQPVPH LTFDEAAELA YFGAQVLHPL SMRPAREGNI PVRVKNSYNP TAPGTVITRS RDMSKAVLTS IVLKRNVTML
401: DITSTRMLGQ YGFLAKVFST FEKLGISVDV VATSEVSISL TLDPSKFCSR ELIQHELDQV VEELEKIAVV NLLRHRSIIS LIGNVQRSSF ILEKGFRVLR
501: TNGINVQMIS QGASKVNISL IVNDDEAEHC VKALHSAFFE TDTCEAVSEC PTGYIAASS

Arabidopsis Description

AK3Aspartokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S702]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.