Factsheet for Bra029532.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008840.1-P
Bra009080.1-P
Bra023401.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	Bra009080.1-P	AT5G09830.1	21798944
AT4G04950.1	Bra008840.1-P	AT5G13280.1	21798944
AT4G04950.1	Bra023401.1-P	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16635	Canola	cytosol	89.38	98.7
CDY67888	Canola	cytosol	97.64	94.03
AT4G32580.1	Thale cress	cytosol	34.51	73.12
Bra000810.1-P	Field mustard	cytosol	90.86	64.71
AT4G04950.1	Thale cress	cytosol	88.2	61.27
VIT_10s0597g00030.t01	Wine grape	cytosol	74.63	51.42
Solyc02g078360.2.1	Tomato	cytosol	43.36	49.66
KRH20463	Soybean	nucleus	70.21	48.57
GSMUA_Achr2P10580_001	Banana	cytosol	69.03	48.55
TraesCS1D01G166900.1	Wheat	cytosol	69.62	48.26
TraesCS1B01G188000.1	Wheat	cytosol	69.62	48.26
TraesCS1A01G168900.1	Wheat	cytosol	69.32	48.06
Os10t0500700-01	Rice	cytosol	69.03	47.66
Zm00001d013927_P001	Maize	extracellular	69.32	47.09
KXG38234	Sorghum	cytosol	69.03	46.89
Zm00001d032546_P001	Maize	extracellular	68.44	46.49
GSMUA_Achr8P11270_001	Banana	cytosol	59.29	45.79
Zm00001d006437_P001	Maize	cytosol	38.05	41.21
Bra003199.1-P	Field mustard	plastid	19.17	35.91
Bra007110.1-P	Field mustard	plastid	18.29	35.63
Bra021125.1-P	Field mustard	mitochondrion	15.93	32.34
Zm00001d016478_P001	Maize	cytosol	28.91	31.82
Bra027220.1-P	Field mustard	mitochondrion	15.93	31.58
Zm00001d011577_P001	Maize	cytosol	44.84	31.08
Zm00001d006222_P001	Maize	cytosol	41.3	28.06
Bra000047.1-P	Field mustard	plastid	15.63	18.03

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra029532	EnsemblPlants:Bra029532.1	EnsemblPlants:Bra029532.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:IPR013766	UniProt:M4EL65
InterPro:Monothiol_GRX-rel	PFAM:PF00085	PFAM:PF00462	PFscan:PS51354	SUPFAM:SSF52833	TIGRFAMs:TIGR00365
InterPro:Thioredoxin-like_sf	InterPro:Thioredoxin_domain	UniParc:UPI0002542681	SEG:seg	:	:

Description

AT4G04950 (E=5e-091) | thioredoxin family protein

Coordinates

chrA09:+:17309128..17310624

Molecular Weight (calculated)

36900.6 Da

IEP (calculated)

4.543

GRAVY (calculated)

-0.350

Length

339 amino acids

Sequence
(BLAST)

001: MGGAVKDIAS KSELDNLRQS GAPIALHFWA SWCDASKQMD QVEAEEHPEI SEAYSVSAVP FFVFFKDGKA VDTLEGADPS SLANKVGKIA GSSTSAEPAA
101: PASLGLAAGP TILETVKENA KATVKDRAQP APTTENLNDR LEKLTNSHPV MLFMKGTPEE PRCGFSRQVV GVLREENVDF GSFDILSDNE VREGLKKFSN
201: WPTFPQLYCN GELLGGSDIV LEMQKSGELR QVLSEKGKQS LEDRLKTLIN SEKVMLFMKG SPDEPKCGFS SKVVKALRDE NVNFGSFDIL SDEEVRQGIK
301: SFSNWPTFPQ LYYKGELVGG CDIIMELSNS GDLGATLSE

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.