Skip to main content
crop-pal logo
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 9
  • cytosol 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78278 Canola plastid 96.55 97.11
Bra003199.1-P Field mustard plastid 82.18 79.01
AT3G54900.1 Thale cress plastid 78.16 78.61
KRH40339 Soybean cytosol 6.9 70.59
KRH00894 Soybean plastid 57.47 56.5
Os03t0851200-01 Rice nucleus, plastid 54.02 55.95
EER93091 Sorghum plastid 54.6 55.23
KRH40338 Soybean plastid 50.0 54.72
GSMUA_Achr6P15060_001 Banana plastid 54.6 54.6
Zm00001d034857_P001 Maize plastid 53.45 54.07
Zm00001d012845_P001 Maize plastid 53.45 54.07
Solyc02g082200.2.1 Tomato plastid 53.45 52.84
TraesCS5D01G542400.1 Wheat plastid 49.43 52.76
TraesCS5B01G545100.1 Wheat plastid 49.43 52.12
PGSC0003DMT400035470 Potato plastid 52.87 51.98
TraesCS4A01G330300.1 Wheat plastid 48.28 51.53
HORVU5Hr1G122340.1 Barley plastid 48.85 43.59
Bra021125.1-P Field mustard mitochondrion 26.44 27.54
Bra027220.1-P Field mustard mitochondrion 27.01 27.49
Bra000047.1-P Field mustard plastid 35.06 20.75
Bra029532.1-P Field mustard cytosol 35.63 18.29
Bra000810.1-P Field mustard cytosol 35.06 12.82
Protein Annotations
Gene3D:3.40.30.10MapMan:35.1EnsemblPlantsGene:Bra007110EnsemblPlants:Bra007110.1EnsemblPlants:Bra007110.1-PGO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006091GO:GO:0006810GO:GO:0006812GO:GO:0008150GO:GO:0008152GO:GO:0009055
GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009941GO:GO:0009987GO:GO:0015035
GO:GO:0015297GO:GO:0019725GO:GO:0022900GO:GO:0045454GO:GO:0055085GO:GO:0055114
InterPro:GRX_PICOT-likeInterPro:GlutaredoxinInterPro:IPR002109UniProt:M4CSB8InterPro:Monothiol_GRX-relPFAM:PF00462
PFscan:PS51354PANTHER:PTHR10293PANTHER:PTHR10293:SF37SUPFAM:SSF52833TIGRFAMs:TIGR00365InterPro:Thioredoxin-like_sf
UniParc:UPI000254299FSEG:seg::::
Description
AT3G54900 (E=5e-063) CXIP1, ATGRXCP | CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase
Coordinates
chrA09:-:27370182..27370706
Molecular Weight (calculated)
18868.8 Da
IEP (calculated)
8.324
GRAVY (calculated)
-0.005
Length
174 amino acids
Sequence
(BLAST)
001: MALRSVKAPT SIPPGVIVSS SVINKPHSLG FASTPTASLA VRSNLKLKPA SPRAAKFRCS AASSSSALTP QLRDTLEKLV NSEKVVLFMK GTRDFPMCGF
101: SNTVVQILKS LNVSFEDVNI LENEMVRQGL KEYSSWPTFP QLYIDGEFFG GCDITLEAFQ SGELQEAVEK AMCS
Best Arabidopsis Sequence Match ( AT3G54900.1 )
(BLAST)
001: MALRSVKTPT LITSVAVVSS SVTNKPHSIR FSLKPTSALV VHNHQLSFYG SNLKLKPTKF RCSASALTPQ LKDTLEKLVN SEKVVLFMKG TRDFPMCGFS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS
Arabidopsis Description
GRXS14Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.