Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- cytosol 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra009080.1-P | |
Bra041065.1-P | |
Bra041074.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G54900.1 | Bra041065.1-P | AT3G50780.1 | 21798944 |
AT3G54900.1 | Bra041074.1-P | AT3G50780.1 | 21798944 |
AT3G54900.1 | Bra009080.1-P | AT5G09830.1 | 21798944 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX78278 | Canola | plastid | 96.55 | 97.11 |
Bra003199.1-P | Field mustard | plastid | 82.18 | 79.01 |
AT3G54900.1 | Thale cress | plastid | 78.16 | 78.61 |
KRH40339 | Soybean | cytosol | 6.9 | 70.59 |
KRH00894 | Soybean | plastid | 57.47 | 56.5 |
Os03t0851200-01 | Rice | nucleus, plastid | 54.02 | 55.95 |
EER93091 | Sorghum | plastid | 54.6 | 55.23 |
KRH40338 | Soybean | plastid | 50.0 | 54.72 |
GSMUA_Achr6P15060_001 | Banana | plastid | 54.6 | 54.6 |
Zm00001d034857_P001 | Maize | plastid | 53.45 | 54.07 |
Zm00001d012845_P001 | Maize | plastid | 53.45 | 54.07 |
Solyc02g082200.2.1 | Tomato | plastid | 53.45 | 52.84 |
TraesCS5D01G542400.1 | Wheat | plastid | 49.43 | 52.76 |
TraesCS5B01G545100.1 | Wheat | plastid | 49.43 | 52.12 |
PGSC0003DMT400035470 | Potato | plastid | 52.87 | 51.98 |
TraesCS4A01G330300.1 | Wheat | plastid | 48.28 | 51.53 |
HORVU5Hr1G122340.1 | Barley | plastid | 48.85 | 43.59 |
Bra021125.1-P | Field mustard | mitochondrion | 26.44 | 27.54 |
Bra027220.1-P | Field mustard | mitochondrion | 27.01 | 27.49 |
Bra000047.1-P | Field mustard | plastid | 35.06 | 20.75 |
Bra029532.1-P | Field mustard | cytosol | 35.63 | 18.29 |
Bra000810.1-P | Field mustard | cytosol | 35.06 | 12.82 |
Protein Annotations
Gene3D:3.40.30.10 | MapMan:35.1 | EnsemblPlantsGene:Bra007110 | EnsemblPlants:Bra007110.1 | EnsemblPlants:Bra007110.1-P | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
GO:GO:0006091 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 |
GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015035 |
GO:GO:0015297 | GO:GO:0019725 | GO:GO:0022900 | GO:GO:0045454 | GO:GO:0055085 | GO:GO:0055114 |
InterPro:GRX_PICOT-like | InterPro:Glutaredoxin | InterPro:IPR002109 | UniProt:M4CSB8 | InterPro:Monothiol_GRX-rel | PFAM:PF00462 |
PFscan:PS51354 | PANTHER:PTHR10293 | PANTHER:PTHR10293:SF37 | SUPFAM:SSF52833 | TIGRFAMs:TIGR00365 | InterPro:Thioredoxin-like_sf |
UniParc:UPI000254299F | SEG:seg | : | : | : | : |
Description
AT3G54900 (E=5e-063) CXIP1, ATGRXCP | CXIP1 (CAX INTERACTING PROTEIN 1); antiporter/ glutathione disulfide oxidoreductase
Coordinates
chrA09:-:27370182..27370706
Molecular Weight (calculated)
18868.8 Da
IEP (calculated)
8.324
GRAVY (calculated)
-0.005
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRSVKAPT SIPPGVIVSS SVINKPHSLG FASTPTASLA VRSNLKLKPA SPRAAKFRCS AASSSSALTP QLRDTLEKLV NSEKVVLFMK GTRDFPMCGF
101: SNTVVQILKS LNVSFEDVNI LENEMVRQGL KEYSSWPTFP QLYIDGEFFG GCDITLEAFQ SGELQEAVEK AMCS
101: SNTVVQILKS LNVSFEDVNI LENEMVRQGL KEYSSWPTFP QLYIDGEFFG GCDITLEAFQ SGELQEAVEK AMCS
001: MALRSVKTPT LITSVAVVSS SVTNKPHSIR FSLKPTSALV VHNHQLSFYG SNLKLKPTKF RCSASALTPQ LKDTLEKLVN SEKVVLFMKG TRDFPMCGFS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS
101: NTVVQILKNL NVPFEDVNIL ENEMLRQGLK EYSNWPTFPQ LYIGGEFFGG CDITLEAFKT GELQEEVEKA MCS
Arabidopsis Description
GRXS14Monothiol glutaredoxin-S14, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84Y95]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.