Factsheet for Bra021125.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
nucleus 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra008840.1-P
Bra009080.1-P
Bra023401.1-P
Bra027974.1-P
Bra033505.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15660.1	Bra033505.1-P	AT4G15730.1	21798944
AT3G15660.1	Bra009080.1-P	AT5G09830.1	21798944
AT3G15660.1	Bra008840.1-P	AT5G13280.1	21798944
AT3G15660.1	Bra023401.1-P	AT5G13280.1	21798944
AT3G15660.1	Bra027974.1-P	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20141	Canola	mitochondrion	98.8	98.8
CDY21857	Canola	mitochondrion	98.2	98.2
Bra027220.1-P	Field mustard	mitochondrion	89.82	87.72
AT3G15660.1	Thale cress	mitochondrion	83.23	82.25
VIT_09s0002g06040.t01	Wine grape	mitochondrion	68.86	67.65
KRH47491	Soybean	cytosol, plastid	61.68	63.98
PGSC0003DMT400073383	Potato	mitochondrion	64.67	63.53
Solyc06g067960.2.1	Tomato	plastid	64.67	63.53
KRH44417	Soybean	cytosol, plastid	60.48	62.73
KRH23549	Soybean	mitochondrion	60.48	62.35
Zm00001d008736_P001	Maize	mitochondrion	49.1	49.1
KXG31737	Sorghum	mitochondrion	53.29	48.11
TraesCS3D01G128900.1	Wheat	mitochondrion	51.5	46.49
TraesCS3A01G127900.1	Wheat	mitochondrion	52.1	46.03
Os01t0174900-01	Rice	mitochondrion	50.9	45.95
Os01t0530400-01	Rice	mitochondrion	50.9	45.95
GSMUA_Achr10P...	Banana	mitochondrion	47.31	41.15
EES12336	Sorghum	mitochondrion	46.71	41.05
TraesCS3B01G147100.1	Wheat	mitochondrion	51.5	39.09
Zm00001d025657_P001	Maize	mitochondrion	43.71	37.82
HORVU3Hr1G023970.2	Barley	cytosol	51.5	33.2
GSMUA_Achr7P08380_001	Banana	plastid	53.29	32.72
Bra003199.1-P	Field mustard	plastid	29.34	27.07
Bra007110.1-P	Field mustard	plastid	27.54	26.44
Bra000047.1-P	Field mustard	plastid	31.14	17.69
Bra029532.1-P	Field mustard	cytosol	32.34	15.93
Bra000810.1-P	Field mustard	cytosol	32.34	11.34

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EnsemblPlantsGene:Bra021125	EnsemblPlants:Bra021125.1	EnsemblPlants:Bra021125.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454
GO:GO:0055114	InterPro:GRX_PICOT-like	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M4DX79	InterPro:Monothiol_GRX-rel
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF54	SUPFAM:SSF52833	TIGRFAMs:TIGR00365
InterPro:Thioredoxin-like_sf	UniParc:UPI0001B63688	:	:	:	:

Description

AT3G15660 (E=4e-073) ATGRX4, GRX4 | GRX4 (GLUTAREDOXIN 4); metal ion binding

Coordinates

chrA01:+:23822815..23823914

Molecular Weight (calculated)

18475.0 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.423

Length

167 amino acids

Sequence
(BLAST)

001: MAAALSSRFL NTVRCNRLAS VSSVYQNGMM RYSSSVPSDS DTHDDFKPTQ KVPPGGSTDS LKDLVENDVK ENPVMLYMKG VPEAPQCGFS SLAVRVLQQY
101: NVPIGARNIL EDPELKNAVK SFSHWPTFPQ IFIKGEFIGG SDIILNMHKE GELEEKLKDV SANHKSQ

Best Arabidopsis Sequence Match ( AT3G15660.2 )
(BLAST)

001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD

Arabidopsis Description

GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.