Factsheet for Os01t0174900-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0866600-01
Os01t0927900-01
Os03t0347300-01
Os03t0850400-01
Os05t0371100-00
Os07t0300900-02
Os07t0498800-01
Os07t0669800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15660.1	Os03t0347300-01	AT4G15730.1	21798944
AT3G15660.1	Os05t0371100-00	AT4G15730.1	21798944
AT3G15660.1	Os07t0669800-01	AT4G15730.1	21798944
AT3G15660.1	Os01t0866600-01	AT5G09830.1	21798944
AT3G15660.1	Os01t0927900-01	AT5G13280.1	21798944
AT3G15660.1	Os03t0850400-01	AT5G13280.1	21798944
AT3G15660.1	Os07t0300900-02	AT5G13280.1	21798944
AT3G15660.1	Os07t0498800-01	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0530400-01	Rice	mitochondrion	87.03	87.03
KXG31737	Sorghum	mitochondrion	77.84	77.84
Zm00001d008736_P001	Maize	mitochondrion	69.19	76.65
TraesCS3D01G128900.1	Wheat	mitochondrion	71.89	71.89
TraesCS3A01G127900.1	Wheat	mitochondrion	71.89	70.37
TraesCS3B01G147100.1	Wheat	mitochondrion	71.35	60.0
KRH09770	Soybean	cytosol	16.76	58.49
VIT_09s0002g06040.t01	Wine grape	mitochondrion	49.19	53.53
KRH44417	Soybean	cytosol, plastid	46.49	53.42
CDY30094	Canola	mitochondrion	47.57	53.33
GSMUA_Achr10P...	Banana	mitochondrion	55.14	53.12
KRH23549	Soybean	mitochondrion	46.49	53.09
PGSC0003DMT400073383	Potato	mitochondrion	48.65	52.94
Solyc06g067960.2.1	Tomato	plastid	48.11	52.35
KRH47491	Soybean	cytosol, plastid	45.41	52.17
CDY20141	Canola	mitochondrion	46.49	51.5
AT3G15660.1	Thale cress	mitochondrion	47.03	51.48
CDY21857	Canola	mitochondrion	45.95	50.9
Bra021125.1-P	Field mustard	mitochondrion	45.95	50.9
CDX97692	Canola	mitochondrion	47.03	50.88
Bra027220.1-P	Field mustard	mitochondrion	47.03	50.88
HORVU3Hr1G023970.2	Barley	cytosol	70.81	50.58
GSMUA_Achr7P08380_001	Banana	plastid	57.3	38.97
Os03t0851200-01	Rice	nucleus, plastid	23.78	26.19
Os12t0175500-01	Rice	plastid	28.65	18.6
Os10t0500700-01	Rice	cytosol	30.27	11.41

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	EntrezGene:4327130	EMBL:AK060966	EMBL:AK104777	ProteinID:BAD68123.1
ProteinID:BAF04081.2	ProteinID:BAS70661.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035	GO:GO:0019725	GO:GO:0022900
GO:GO:0045454	GO:GO:0046872	GO:GO:0051536	GO:GO:0051537	GO:GO:0055114	InterPro:GRX_PICOT-like
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Monothiol_GRX-rel	EnsemblPlantsGene:Os01g0174900	EnsemblPlants:Os01t0174900-01	PFAM:PF00462
PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF54	UniProt:Q0JQ97	SUPFAM:SSF52833	InterPro:Thioredoxin-like_sf
UniParc:UPI0000457D85	RefSeq:XP_015621545.1	SEG:seg	:	:	:

Description

GLUTAREDOXIN 1Thioredoxin fold domain containing protein. (Os01t0174900-01)

Coordinates

chr1:+:3842779..3845436

Molecular Weight (calculated)

20181.1 Da

IEP (calculated)

8.231

GRAVY (calculated)

-0.308

Length

185 amino acids

Sequence
(BLAST)

001: MARLVSTALM RGLVRSSRAP RVAAVSQPAI QQFRNYSPGL GGDSRGSGDS SSTRVAADPD THQDFQPTSK SSNMSFDDIV AQDIKENPVL IYMKGFPESP
101: MCGFSALAVK VLKLYDVPIS ARDILGDLKL KECVKAHTNW PTFPQIFIKG EFVGGSDIIL DMHQKGQLKD VLGDIAQKHE QKESS

Best Arabidopsis Sequence Match ( AT3G15660.2 )
(BLAST)

001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD

Arabidopsis Description

GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.