Factsheet for GSMUA_Achr7P08380_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr3P08980_001
GSMUA_Achr5P08000_001
GSMUA_Achr5P18990_001
GSMUA_Achr6P19570_001
GSMUA_Achr8P09140_001
GSMUA_Achr8P21920_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15660.1	GSMUA_Achr3P08980_001	AT4G15730.1	21798944
AT3G15660.1	GSMUA_Achr5P08000_001	AT4G15730.1	21798944
AT3G15660.1	GSMUA_Achr8P21920_001	AT4G15730.1	21798944
AT3G15660.1	GSMUA_Achr6P19570_001	AT5G09830.1	21798944
AT3G15660.1	GSMUA_Achr8P09140_001	AT5G13280.1	21798944
AT3G15660.1	GSMUA_AchrUn_...	AT5G13280.1	21798944
AT3G15660.1	GSMUA_AchrUn_...	AT5G13280.1	21798944
AT3G15660.1	GSMUA_AchrUn_...	AT5G13280.1	21798944
AT3G15660.1	GSMUA_Achr5P18990_001	AT5G42220.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	mitochondrion	55.51	78.65
KRH09770	Soybean	cytosol	12.87	66.04
Os01t0530400-01	Rice	mitochondrion	41.18	60.54
Zm00001d008736_P001	Maize	mitochondrion	37.13	60.48
KXG31737	Sorghum	mitochondrion	40.81	60.0
TraesCS3D01G128900.1	Wheat	mitochondrion	39.71	58.38
TraesCS3A01G127900.1	Wheat	mitochondrion	40.07	57.67
KRH23549	Soybean	mitochondrion	34.19	57.41
Os01t0174900-01	Rice	mitochondrion	38.97	57.3
KRH44417	Soybean	cytosol, plastid	33.82	57.14
PGSC0003DMT400073383	Potato	mitochondrion	34.56	55.29
EES12336	Sorghum	mitochondrion	38.6	55.26
CDY30094	Canola	mitochondrion	33.46	55.15
Bra027220.1-P	Field mustard	mitochondrion	34.56	54.97
CDX97692	Canola	mitochondrion	34.56	54.97
Solyc06g067960.2.1	Tomato	plastid	34.19	54.71
KRH47491	Soybean	cytosol, plastid	31.62	53.42
Bra021125.1-P	Field mustard	mitochondrion	32.72	53.29
CDY21857	Canola	mitochondrion	32.72	53.29
CDY20141	Canola	mitochondrion	32.72	53.29
VIT_09s0002g06040.t01	Wine grape	mitochondrion	32.72	52.35
Zm00001d025657_P001	Maize	mitochondrion	36.4	51.3
AT3G15660.1	Thale cress	mitochondrion	31.62	50.89
TraesCS3B01G147100.1	Wheat	mitochondrion	39.34	48.64
HORVU3Hr1G023970.2	Barley	cytosol	41.54	43.63
GSMUA_Achr6P15060_001	Banana	plastid	16.54	25.86
GSMUA_Achr5P14210_001	Banana	plastid	18.75	15.69
GSMUA_Achr2P10580_001	Banana	cytosol	21.69	12.24
GSMUA_Achr8P11270_001	Banana	cytosol	19.49	12.07

Protein Annotations

Gene3D:3.40.30.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005623
GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987	GO:GO:0015035
GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like	EnsemblPlantsGene:GSMUA_Achr7G08380_001
EnsemblPlants:GSMUA_Achr7P08380_001	EnsemblPlants:GSMUA_Achr7T08380_001	InterPro:Glutaredoxin	InterPro:IPR002109	UniProt:M0TFS8	InterPro:Monothiol_GRX-rel
PFAM:PF00462	PFscan:PS51354	PANTHER:PTHR10293	PANTHER:PTHR10293:SF54	SUPFAM:SSF52833	TIGRFAMs:TIGR00365
InterPro:Thioredoxin-like_sf	UniParc:UPI0002965B46	SEG:seg	:	:	:

Description

Monothiol glutaredoxin-S4, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr7G08380_001]

Coordinates

chr7:+:6254567..6259485

Molecular Weight (calculated)

29887.9 Da

IEP (calculated)

10.285

GRAVY (calculated)

-0.385

Length

272 amino acids

Sequence
(BLAST)

001: MAGVEADAAM TARASKIISA TLLSPGFLWK RPTWAIIRPN KPGSSRRPRG GFTRRRPLRS SCLDCQYCHR GSCGQSFFRQ MARLLSSMVL RAMTSSSNST
101: KVAFGSSYLK QMKYSTRGSA DSGVNADLPT NGFASSGTYP TRITSDPDTH EDFQPTNKNT GISILDIVQQ DVKENPVMIY MKGLPDAPRC GFSALAVKVL
201: QQYGVPIRAR DILGDLKLKE SVKAYTNWPT FPQVFIKGEF VGGSDIVLNM HQKGELKDLL ADITHNGNQG RE

Best Arabidopsis Sequence Match ( AT3G15660.2 )
(BLAST)

001: MAASLSSRLI KGIANLKAVR SSRLTSASVY QNGMMRFSST VPSDSDTHDD FKPTQKVPPD STDSLKDIVE NDVKDNPVMI YMKGVPESPQ CGFSSLAVRV
101: LQQYNVPISS RNILEDQELK NAVKSFSHWP TFPQIFIKGE FIGGSDIILN MHKEGELEQK LKDVSGNQD

Arabidopsis Description

GRXS15GRX4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHP8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.