Factsheet for Zm00001d006222_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005151_P004
Zm00001d018301_P001
Zm00001d029179_P001
Zm00001d034851_P001
Zm00001d035282_P001
Zm00001d037282_P001
Zm00001d042264_P006
Zm00001d042726_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G04950.1	Zm00001d042726_P001	AT5G09830.1	21798944
AT4G04950.1	Zm00001d005151_P004	AT5G13280.1	21798944
AT4G04950.1	Zm00001d018301_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d029179_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d034851_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d035282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d037282_P001	AT5G13280.1	21798944
AT4G04950.1	Zm00001d042264_P006	AT5G13280.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006437_P001	Maize	cytosol	56.71	90.42
Zm00001d011577_P001	Maize	cytosol	81.36	83.03
Zm00001d016478_P001	Maize	cytosol	46.29	75.0
Zm00001d013927_P001	Maize	extracellular	63.13	63.13
KXG38234	Sorghum	cytosol	62.32	62.32
Zm00001d032546_P001	Maize	extracellular	60.72	60.72
Os10t0500700-01	Rice	cytosol	58.32	59.27
TraesCS1D01G166900.1	Wheat	cytosol	55.51	56.65
TraesCS1A01G168900.1	Wheat	cytosol	55.11	56.24
TraesCS1B01G188000.1	Wheat	cytosol	54.91	56.03
GSMUA_Achr8P11270_001	Banana	cytosol	43.09	48.97
GSMUA_Achr2P10580_001	Banana	cytosol	44.69	46.27
AT4G04950.1	Thale cress	cytosol	44.49	45.49
Bra000810.1-P	Field mustard	cytosol	43.29	45.38
CDX90882	Canola	cytosol	43.29	45.28
KRH20463	Soybean	nucleus	43.89	44.69
VIT_10s0597g00030.t01	Wine grape	cytosol	43.89	44.51
CDY16635	Canola	cytosol	27.25	44.3
CDY21322	Canola	cytosol	43.09	42.32
Bra029532.1-P	Field mustard	cytosol	28.06	41.3
CDY67888	Canola	cytosol	27.86	39.49
Solyc02g078360.2.1	Tomato	cytosol	18.44	31.08
Zm00001d012845_P001	Maize	plastid	9.82	28.49
Zm00001d034857_P001	Maize	plastid	9.62	27.91
Zm00001d008736_P001	Maize	mitochondrion	9.22	27.54
Zm00001d025657_P001	Maize	mitochondrion	7.82	20.21
Zm00001d005094_P001	Maize	plastid	10.02	17.18
Zm00001d044606_P001	Maize	plastid	9.82	16.78
AT4G32580.1	Thale cress	cytosol	5.01	15.62

Protein Annotations

MapMan:20.1.5.1.2	Gene3D:3.40.30.10	UniProt:A0A1D6ETY4	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005623	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009055	GO:GO:0009987
GO:GO:0015035	GO:GO:0019725	GO:GO:0022900	GO:GO:0045454	GO:GO:0055114	InterPro:GRX_PICOT-like
InterPro:Glutaredoxin	InterPro:IPR002109	InterPro:Monothiol_GRX-rel	ProteinID:ONM23132.1	PFAM:PF00462	PFscan:PS51354
SUPFAM:SSF52833	TIGRFAMs:TIGR00365	InterPro:Thioredoxin-like_sf	UniParc:UPI000844BDFC	EnsemblPlantsGene:Zm00001d006222	EnsemblPlants:Zm00001d006222_P001
EnsemblPlants:Zm00001d006222_T001	SEG:seg	:	:	:	:

Description

Monothiol glutaredoxin-S17

Coordinates

chr2:-:202197498..202201445

Molecular Weight (calculated)

54531.8 Da

IEP (calculated)

7.188

GRAVY (calculated)

-0.625

Length

499 amino acids

Sequence
(BLAST)

001: MPPLAQSSLP RNPNQESDSA LDESDGRKTR RPRGERGNKE EDEGVLDTEE LAIVNSTFRK AKGSRLPGII EETRRSGEST TSTLESETWA MESLETELFD
101: NVRASIQRSL GKPDKLLGRP VAASTPPKAT ANAPRVAGNK PQMLTQHARD SNGGGLARDG GGATAGERNQ REKGREGTNL APEASREMAR TQKNKATAHH
201: LGLLKQKGVN ILKQEGVKFG SFDILTDNDV REGMKKFSNW PTVPQLYCKG ELLGGCDIVI AMHDSGELKD VFEEHNIPLK PQGSKNEEAG QPESSTEKGG
301: AVAEPIGLTD AQKARLESLI NYSPVMVFIK GTPEEPRCGF SGKLVHILKQ ENIPFSSFDI LSDDEVRQGL KVLSNWPSYP QLYIKGELVG GSDIVMEMHK
401: SGELKKVLSE KGVIPKESLE DRLKSLVSSA PVMLLMKGTP DAPRCGFSSK VVNALKKKGV SFGSFDILSD EEVRQGLKTY SNWPTFPQLY YKSELIVGM

Best Arabidopsis Sequence Match ( AT4G04950.1 )
(BLAST)

001: MSGTVKDIVS KAELDNLRQS GAPVVLHFWA SWCDASKQMD QVFSHLATDF PRAHFFRVEA EEHPEISEAY SVAAVPYFVF FKDGKTVDTL EGADPSSLAN
101: KVGKVAGSST SAEPAAPASL GLAAGPTILE TVKENAKASL QDRAQPVSTA DALKSRLEKL TNSHPVMLFM KGIPEEPRCG FSRKVVDILK EVNVDFGSFD
201: ILSDNEVREG LKKFSNWPTF PQLYCNGELL GGADIAIAMH ESGELKDAFK DLGITTVGSK ESQDEAGKGG GVSSGNTGLS ETLRARLEGL VNSKPVMLFM
301: KGRPEEPKCG FSGKVVEILN QEKIEFGSFD ILLDDEVRQG LKVYSNWSSY PQLYVKGELM GGSDIVLEMQ KSGELKKVLT EKGITGEQSL EDRLKALINS
401: SEVMLFMKGS PDEPKCGFSS KVVKALRGEN VSFGSFDILT DEEVRQGIKN FSNWPTFPQL YYKGELIGGC DIIMELSESG DLKATLSE

Arabidopsis Description

GRXS17Monothiol glutaredoxin-S17 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.