Factsheet for TraesCS3B01G475900.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS6A01G074100.1
TraesCSU01G086500.1
TraesCSU01G123400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	TraesCS6A01G074100.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G086500.1	AT5G60340.1	21798944
AT5G13280.1	TraesCSU01G123400.1	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G434800.1	Wheat	plastid	97.87	97.52
TraesCS3A01G442100.2	Wheat	plastid	97.87	97.18
HORVU3Hr1G096500.10	Barley	plastid	96.09	93.12
Zm00001d029179_P001	Maize	extracellular	10.3	92.06
Zm00001d018301_P001	Maize	extracellular, plasma membrane	36.77	84.49
Os01t0927900-01	Rice	mitochondrion	84.19	83.16
OQU88150	Sorghum	mitochondrion	80.64	81.8
GSMUA_Achr8P09140_001	Banana	cytosol	67.5	78.03
Zm00001d042264_P006	Maize	mitochondrion, plastid	80.11	77.89
Zm00001d037282_P001	Maize	plastid	22.38	77.78
GSMUA_AchrUn_...	Banana	plastid	54.35	71.16
TraesCS5B01G547400.1	Wheat	plastid	70.52	71.02
KRH70062	Soybean	plastid	69.27	69.39
KRH08407	Soybean	plastid	69.45	69.2
CDX78557	Canola	plastid	64.65	67.78
Bra006235.1-P	Field mustard	plastid	64.65	67.78
VIT_01s0244g00140.t01	Wine grape	plastid	68.92	67.71
KRG94687	Soybean	plastid	67.32	67.44
AT5G14060.1	Thale cress	plastid	64.83	67.1
Solyc01g005240.2.1	Tomato	plastid	67.32	67.08
KRH06839	Soybean	plastid	66.79	67.02
AT5G13280.1	Thale cress	plastid	67.67	66.96
CDX70538	Canola	plastid	64.65	66.67
AT3G02020.1	Thale cress	plastid	65.54	66.01
CDY09781	Canola	plastid	63.77	65.27
Bra008840.1-P	Field mustard	plastid	63.59	64.97
CDX69652	Canola	plastid	63.59	64.97
CDX85659	Canola	plastid	63.41	64.44
Bra023401.1-P	Field mustard	plastid	63.41	64.44
CDX91135	Canola	plastid	63.06	63.96
PGSC0003DMT400058635	Potato	cytosol	64.12	62.03
CDY06621	Canola	plastid	63.06	61.63
CDY20797	Canola	plastid	62.7	61.07
Bra035544.1-P	Field mustard	plastid	62.7	61.07
VIT_14s0068g01190.t01	Wine grape	cytosol	69.63	59.94
CDX70539	Canola	mitochondrion	9.41	56.99
GSMUA_AchrUn_...	Banana	plastid	16.16	36.11
TraesCS7B01G461700.1	Wheat	nucleus	45.12	24.98
TraesCS5B01G550800.1	Wheat	nucleus	39.08	21.38
TraesCS5B01G174600.1	Wheat	plastid	22.91	14.1
Solyc11g040380.1.1	Tomato	plastid	1.6	7.83
TraesCS5B01G141000.2	Wheat	plastid	2.31	3.43

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase	InterPro:Asp_kinase
InterPro:Aspartate_kinase_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0008150	GO:GO:0008152
GO:GO:0008652	GO:GO:0009058	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	InterPro:IPR002912
InterPro:IPR036393	PFAM:PF00696	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR21499	PANTHER:PTHR21499:SF40
SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	EnsemblPlantsGene:TraesCS3B01G475900	EnsemblPlants:TraesCS3B01G475900.2	TIGR:cd04244
TIGR:cd04933	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:724750799..724755139

Molecular Weight (calculated)

60826.6 Da

IEP (calculated)

6.160

GRAVY (calculated)

0.048

Length

563 amino acids

Sequence
(BLAST)

001: MAIALRFAAT PPRLAAPIPP TSAPRAHGGV VRVGAQGGTR CGRRLAMAAA DSARCRAKRE GDGDGVLAGV AVHGGTGAEG EDQLSVVMKF GGSSVSSAAR
101: MKEVAGLIQA FPEERPVVVL SAMGKTTNLL LLAGEKAVGC GVTRVSEIEE WNKLRDLHIK TVDELGLPRS VIHAKLDELE QLLKGVAMMK ELTLRSTDYL
201: VSFGECMSTR VFAAYLNQIG VKARQCDAFD IGFITTDDFG NAEILEATYP AVAKRLHGDW IRDPAIPVVT GFLGKGWKSG AVTTLGRGGS DLTATTIGKA
301: LGLREIQVWK DVDGVLTCDP NIYPNARTVP YLTFDEAAEL AYFGAQVLHP QSMRPAREGD IPVRVKNSYN PKAPGTLIAK GRDMDKVVLT SIVLKSNVTM
401: LDIVSTRMLG QFGFLAKVFS IFEDLGISVD CVATSEVSIS VSLDPSKIWS RELIQQELDH VVEELEKIAF VHLLQQRAIV SLIGNVRKSS LILEKAFHVL
501: RRIGVNVQMI SQGASKVNMS LIVHDSEAKQ CVEALHQAFF EGDDDGDDCL MAEFDEENLR LEL

Best Arabidopsis Sequence Match ( AT3G02020.1 )
(BLAST)

001: MAASMQFYGV KTPELALNSK RIEFSSKGLN FSALVSSARV FSRNVDRSCK NIALRVTCEA GRVELLERKA SETFKLNKTE KKLTCVMKFG GSSVASAERM
101: IQVAKLILSF PDEKPVVVLS AMAKTTNKLL MAGEKAVCCG VTNVDTIEEL SYIKELHIRT AHELGVETAV IAEHLEGLEQ LLKGVAMMKE LTLRSRDYLV
201: SFGECMSTRL FAAYLNKIGH KARQYDAFEI GIITTDDFTN ADILEATYPA VSKKLLGDWS KENALPVVTG FLGKGWRSCA VTTLGRGGSD LTATTIGKAL
301: GLREIQVWKD VDGVLTCDPN IYCGAQPVPH LTFDEAAELA YFGAQVLHPL SMRPAREGNI PVRVKNSYNP TAPGTVITRS RDMSKAVLTS IVLKRNVTML
401: DITSTRMLGQ YGFLAKVFST FEKLGISVDV VATSEVSISL TLDPSKFCSR ELIQHELDQV VEELEKIAVV NLLRHRSIIS LIGNVQRSSF ILEKGFRVLR
501: TNGINVQMIS QGASKVNISL IVNDDEAEHC VKALHSAFFE TDTCEAVSEC PTGYIAASS

Arabidopsis Description

AK3Aspartokinase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9S702]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.