CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU88892

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	OQU88892	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029179_P001	Maize	extracellular	11.17	98.41
Zm00001d042264_P006	Maize	mitochondrion, plastid	94.95	91.02
Zm00001d018301_P001	Maize	extracellular, plasma membrane	39.64	89.8
Zm00001d037282_P001	Maize	plastid	23.96	82.1
Os01t0927900-01	Rice	mitochondrion	83.6	81.4
TraesCS3B01G475900.2	Wheat	plastid	81.8	80.64
TraesCS3D01G434800.1	Wheat	plastid	81.98	80.53
TraesCS3A01G442100.2	Wheat	plastid	81.08	79.37
GSMUA_Achr8P09140_001	Banana	cytosol	69.55	79.26
HORVU3Hr1G096500.10	Barley	plastid	81.8	78.14
GSMUA_AchrUn_...	Banana	plastid	56.04	72.33
KRH70062	Soybean	plastid	70.27	69.39
KXG34945	Sorghum	mitochondrion, plastid	70.09	69.22
KRH08407	Soybean	plastid	69.55	68.32
EER93093	Sorghum	plastid	69.19	67.84
VIT_01s0244g00140.t01	Wine grape	plastid	69.19	67.02
Bra006235.1-P	Field mustard	plastid	64.68	66.85
CDX78557	Canola	plastid	64.68	66.85
Solyc01g005240.2.1	Tomato	plastid	67.93	66.73
AT5G13280.1	Thale cress	plastid	68.29	66.61
AT5G14060.1	Thale cress	plastid	65.05	66.36
KRG94687	Soybean	plastid	67.03	66.19
KRH06839	Soybean	plastid	66.67	65.95
CDX70538	Canola	plastid	64.68	65.75
CDY09781	Canola	plastid	64.5	65.09
Bra008840.1-P	Field mustard	plastid	64.5	64.97
CDX69652	Canola	plastid	64.5	64.97
CDX85659	Canola	plastid	64.32	64.44
Bra023401.1-P	Field mustard	plastid	64.32	64.44
CDX91135	Canola	plastid	64.32	64.32
AT3G02020.1	Thale cress	plastid	64.68	64.22
CDY06621	Canola	plastid	63.96	61.63
PGSC0003DMT400058635	Potato	cytosol	64.5	61.51
CDY20797	Canola	plastid	63.6	61.07
Bra035544.1-P	Field mustard	plastid	63.6	61.07
VIT_14s0068g01190.t01	Wine grape	cytosol	69.01	58.56
CDX70539	Canola	mitochondrion	9.55	56.99
GSMUA_AchrUn_...	Banana	plastid	16.4	36.11
EER96488	Sorghum	plastid	24.32	14.72
Solyc11g040380.1.1	Tomato	plastid	1.62	7.83
EES15586	Sorghum	extracellular	1.98	3.51

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	EntrezGene:8059392	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	UniProt:C5XH02	ProteinID:EES04141.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004072	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009088	GO:GO:0009089	GO:GO:0009536
GO:GO:0009570	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR002912
InterPro:IPR036393	EnsemblPlants:OQU88150	ProteinID:OQU88150	ProteinID:OQU88150.1	PFAM:PF00696	ScanProsite:PS00324
PFscan:PS51671	PANTHER:PTHR21499	PANTHER:PTHR21499:SF40	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097
MetaCyc:PWY-6559	MetaCyc:PWY-6562	MetaCyc:PWY-7153	EnsemblPlantsGene:SORBI_3003G412100	SUPFAM:SSF53633	SUPFAM:SSF55021
unigene:Sbi.11409	TIGRFAMs:TIGR00657	UniParc:UPI0001A85626	RefSeq:XP_002459021.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:71937362..71942095

Molecular Weight (calculated)

59841.9 Da

IEP (calculated)

6.037

GRAVY (calculated)

0.142

Length

555 amino acids

Sequence
(BLAST)

001: MATPVRSAAA PRRLVPSIPP ASSGHVQQLA CFGTRTEPCG ARGLSMVVAD STRRRAKLGD GGDGVLGASV LGGLGMAGLG DQLSVVMKFG GSSVASAARM
101: AEVAGLILTF PEERPVVVLS AMGKTTNNLL LAGEKAVGCG VIHVSEIEEW NMIKDLHIKT VDELGLPRSV IQDMLDELEQ LLKGIAMMKE LTPRTSDYLV
201: SFGECMSTRI FAAYLNKIGV KARQYDAFDI GFMTTDEFGN ADILEATYPA VAKRLHGDWI LDPAIPVVTG FLGKGWKSGA VTTLGRGGSD LTATTIGKAL
301: GLREIQVWKD VDGVLTCDPN IYPHAKTVPY LTFEEATELA YFGAQVLHPQ SMRPAREGDI PVRVKNSYNP KAPGTLITKQ RDMDKVVLTS IVLKSNVTML
401: DIVSTRMLGQ YGFLARVFAI FEDLGISVDC VATSEVSVSV SLDPSKIWSR ELIQQELDNV VEELEKIAIV HLLQQRAIIS LIGNVRQMSL ILEKTGHVLR
501: KSGVNVQMIS QGASKVNMSL IVHDSEAKAL VEALHQAFFQ DDVLAQVEVE NLLVG

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.