CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU88892

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13280.1	OQU88892	AT5G60340.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005151_P004	Maize	plastid	94.48	93.98
Os07t0300900-02	Rice	plastid	83.99	82.09
EER93093	Sorghum	plastid	76.16	75.62
KRH70062	Soybean	plastid	72.78	72.78
KRH08407	Soybean	plastid	72.6	72.21
Bra006235.1-P	Field mustard	plastid	68.15	71.32
CDX78557	Canola	plastid	68.15	71.32
Solyc01g005240.2.1	Tomato	plastid	71.17	70.8
GSMUA_AchrUn_...	Banana	vacuole	16.73	70.68
CDX70538	Canola	plastid	68.15	70.15
OQU88150	Sorghum	mitochondrion	69.22	70.09
VIT_01s0244g00140.t01	Wine grape	plastid	71.35	69.98
AT5G14060.1	Thale cress	plastid	67.62	69.85
KRH06839	Soybean	plastid	69.57	69.7
KRG94687	Soybean	plastid	69.57	69.57
AT3G02020.1	Thale cress	plastid	67.79	68.16
AT5G13280.1	Thale cress	plastid	67.79	66.96
Bra008840.1-P	Field mustard	plastid	64.95	66.24
CDX69652	Canola	plastid	64.95	66.24
CDY09781	Canola	plastid	64.59	66.0
PGSC0003DMT400058635	Potato	cytosol	67.97	65.64
CDX85659	Canola	plastid	64.59	65.52
Bra023401.1-P	Field mustard	plastid	64.59	65.52
CDX91135	Canola	plastid	64.41	65.23
CDY06621	Canola	plastid	65.66	64.06
CDY20797	Canola	plastid	65.48	63.67
Bra035544.1-P	Field mustard	plastid	65.48	63.67
VIT_14s0068g01190.t01	Wine grape	cytosol	72.06	61.93
CDX70539	Canola	mitochondrion	9.61	58.06
EER96488	Sorghum	plastid	25.44	15.59
Solyc11g040380.1.1	Tomato	plastid	1.6	7.83
EES15586	Sorghum	extracellular	2.14	3.83

Protein Annotations

KEGG:00260+2.7.2.4	KEGG:00261+2.7.2.4	KEGG:00270+2.7.2.4	KEGG:00300+2.7.2.4	Gene3D:1.20.120.1320	Gene3D:3.30.70.260
Gene3D:3.40.1160.10	MapMan:4.1.2.2.1	UniProt:A0A1B6QAJ5	InterPro:ACT_dom	InterPro:AceGlu_kinase-like_sf	InterPro:Asp/Glu/Uridylate_kinase
InterPro:Asp_kinase	InterPro:Aspartate_kinase_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0004072	GO:GO:0008150
GO:GO:0008152	GO:GO:0008652	GO:GO:0009058	GO:GO:0009088	GO:GO:0009089	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	InterPro:IPR002912	InterPro:IPR036393	EnsemblPlants:KXG34945
ProteinID:KXG34945	ProteinID:KXG34945.1	PFAM:PF00696	ScanProsite:PS00324	PFscan:PS51671	PANTHER:PTHR21499
PANTHER:PTHR21499:SF40	MetaCyc:PWY-2941	MetaCyc:PWY-2942	MetaCyc:PWY-5097	MetaCyc:PWY-6559	MetaCyc:PWY-6562
MetaCyc:PWY-7153	EnsemblPlantsGene:SORBI_3002G111800	SUPFAM:SSF53633	SUPFAM:SSF55021	TIGRFAMs:TIGR00657	UniParc:UPI0003C6ED39
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:13600924..13606432

Molecular Weight (calculated)

60812.8 Da

IEP (calculated)

7.082

GRAVY (calculated)

0.068

Length

562 amino acids

Sequence
(BLAST)

001: MAAPALRTTP RLGLALDGAT AARRRGALAP AAVPAAPCLR KATVRCQRAV SAAAIVEKKD ASVAAAQERG GDGELTVVMK FGGSSVASAE RMREVADLIL
101: SFPEERPVVV LSAMGKTTNK LLMAGEKAVG CGATKVSELE ELSFVKELHL GTLDQLGLDR SIIYGLLDEL EQLLKGIAMM KELTLRTRDY LVSFGECMST
201: RIFAALLNKI GVKARQYDAF DLGFITTDDF TNADILEATY PAVAKRLHGD WINDPAIPIV TGFLGKGWRS GAITTLGRGG SDLTATTIGK ALGLREIQVW
301: KDVDGVLTCD PNIHPKAKPV PYLTFDEAAE LAYFGAQVLH PQSMRPAREG DVPVRVKNSY NRRAPGTLIT KARDMSKTVL TSIVLKSNIT MLDIVSTRML
401: GQYGFLAKVF SIFEDSGMSV DCVATSEVSI SLTLDPSKLW SCELVQHRNE LDVVIEELEK IAVVHLLQNR SIISLIGNVQ RSSLILEKAF NVLRRNGVNV
501: QMISQGASKV NISLVVHDSE AKQCVQALHS AFFENGFLLE ADELDVLHDG FTSHPNGTIH SP

Best Arabidopsis Sequence Match ( AT5G13280.1 )
(BLAST)

001: MAATRVRCCH SNAAFTRLPL TRHRNSPTLP ISLNRVDFPT LKKLSLPIGD GSSIRKVSGS GSRNIVRAVL EEKKTEAITE VDEKGITCVM KFGGSSVASA
101: ERMKEVADLI LTFPEESPVI VLSAMGKTTN NLLLAGEKAV SCGVSNASEI EELSIIKELH IRTVKELNID PSVILTYLEE LEQLLKGIAM MKELTLRTRD
201: YLVSFGECLS TRIFAAYLNT IGVKARQYDA FEIGFITTDD FTNGDILEAT YPAVAKRLYD DWMHDPAVPI VTGFLGKGWK TGAVTTLGRG GSDLTATTIG
301: KALGLKEIQV WKDVDGVLTC DPTIYKRATP VPYLTFDEAA ELAYFGAQVL HPQSMRPARE GEIPVRVKNS YNPKAPGTII TKTRDMTKSI LTSIVLKRNV
401: TMLDIASTRM LGQVGFLAKV FSIFEELGIS VDVVATSEVS ISLTLDPSKL WSRELIQQEL DHVVEELEKI AVVNLLKGRA IISLIGNVQH SSLILERAFH
501: VLYTKGVNVQ MISQGASKVN ISFIVNEAEA EGCVQALHKS FFESGDLSEL LIQPRLGNGS PVRTLQVEN

Arabidopsis Description

AK1AK1 [Source:UniProtKB/TrEMBL;Acc:A0A178UUC2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.