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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • cytosol 1
  • nucleus 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G013700.2 Wheat nucleus 80.58 88.24
TraesCS6D01G017100.2 Wheat nucleus 80.4 87.04
TraesCS6B01G020900.1 Wheat nucleus 79.26 86.34
TraesCS6A01G013800.1 Wheat plastid 11.22 76.77
Os07t0498800-01 Rice cytosol 33.27 52.69
KXG25466 Sorghum nucleus 42.6 47.73
Zm00001d052721_P001 Maize plasma membrane 37.7 44.2
CDX95199 Canola nucleus 10.37 31.79
CDY42355 Canola nucleus 24.03 31.17
GSMUA_Achr5P18990_001 Banana cytosol 30.16 31.13
Bra027974.1-P Field mustard nucleus 23.85 30.78
AT5G42220.1 Thale cress nucleus 24.32 29.35
Solyc04g082160.2.1 Tomato nucleus 23.37 28.94
PGSC0003DMT400025616 Potato plastid 17.91 28.11
KRH17506 Soybean nucleus 24.69 27.99
KRH06004 Soybean nucleus 24.69 27.87
CDX95198 Canola nucleus 11.59 26.57
VIT_09s0054g01880.t01 Wine grape nucleus 23.47 26.35
HORVU3Hr1G014250.5 Barley cytosol, plastid 18.47 25.82
Protein Annotations
EnsemblPlants:HORVU6Hr1G002580.6EnsemblPlantsGene:HORVU6Hr1G002580Gene3D:3.10.20.90GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000626InterPro:UbiquitinInterPro:Ubiquitin-like_domsfInterPro:Ubiquitin_CSInterPro:Ubiquitin_domPANTHER:PTHR15204
PANTHER:PTHR15204:SF5PFAM:PF00240PFscan:PS50053PRINTS:PR00348ScanProsite:PS00299SEG:seg
SMART:SM00213SUPFAM:SSF54236UniParc:UPI000B47E8ADUniProt:A0A287T5N1MapMan:35.1:
Description
No Description!
Coordinates
chrchr6H:-:6670090..6678137
Molecular Weight (calculated)
109917.0 Da
IEP (calculated)
5.152
GRAVY (calculated)
-0.394
Length
1061 amino acids
Sequence
(BLAST)
0001: RDRRKDEFLH SSPESNQNPS LLLPSPPLRL RVLESHRRAA SASPSDPSAS LAAVPGRPRR PAPSPPAALR RPPLPRRPRD LGRRFPRGMA DDGASAVGGS
0101: TARDGSDGPE PATIEINIKT LESQVHKLRV DKNETVLNLK EKIVDVAGIP VEQQRLIFRG RVLKDDHLLS EYHLEDGYTL HLVARRTAEG QQSSETSEAS
0201: PNPNVNNAGN GAMLGDYMSR ETIDVMVSEG VINDIPATVR DILGNFLGMP GGMANATFSV PPDGANNGRT QPGQAPPGFS ILNHQIHVTQ LPPSGAIPRN
0301: LVIPDSMTTL LEYIDRMDQV LQNNGIPPSM DSNAQEPPTS TSDDAYLNQR FPSPEVLASV VERAQQLLGG SASSALSHLA QRIQSDAATG DASVRSQIQN
0401: ESAQLGVAIQ HLGAMLFELG RTMMTLRMGP SPANAFVNAG PAVYITPTGP SPIMVQPSFQ SAPHFGVSSI PPVFGVSGPF GIVDPSRANG VNVHGGASAT
0501: SGPSVGSTTA SATAANGESQ NAERTQGGNP SATRGLPPRT VVAAIPGFPG RSSVGVILPV QMRSQVATPN QSTGPQGSQT AVGNGSQPIS TYVVPQASTG
0601: SAISSMIAQI SAQVANALAA NPQALASLTS SVLNPAAQGP HPTTNNGAGT VSSVTSGNTQ LQNELPGSHH GQTSLNVQSH ATGAGTVPSN TSDPSLTPQD
0701: ISTVSASDVD SSQQHSVELA AASLGGQLTA ASLGEQSTGT RTGDVPLGMP AENTELKSKP SDGEAGESTK PTASGGSGPL GLGGGLQPKR RSKVAKPSGT
0801: SSNSGEAVNT SSAPRSQEAV LMGQQALQAL VSRGANASSG SVTTSQAPSS TPRSAAGMTM RRPGGEGQVD IGSMISSVLN SPVFGSLMSN VAGQPGMESS
0901: ADVRNIMEDL TQNRAVMDTL SSMVQNMDAP QRGQGGFDLS RMMQQMMPVV SQVLGGPAAR PAGTDVQPRQ NDRDVSDAVG GRSSQMDLQE ACQRIEQHDA
1001: PEDIFGAVLE TAAQAYGNDE SIEVMLEELA NDPELADEYM KLLLAQVGER VESESEAKKE S
Best Arabidopsis Sequence Match ( AT5G42220.1 )
(BLAST)
001: MEDQPINQCS SSTNASEKTP ESTLELNIKT LDSRTYTFQV NKNETVLLFK EKIASETGVP VGQQRLIFRG RVLKDDHPLS EYHLENGHTL HLIVRQPAES
101: APSSGTPSQG ATANDGNNTN GGPSRNGRHV SHSVVLGSFN VGDQTEGIVP DLSRVIGAVL NSFGVSGQLP TNHSTNGTQS SMPSNQSSNA PPGNTSDGEP
201: GIGGQSQATG HSQPRQAFPG VSFQTSMPRV VQIPVTAATT IPIPSFLTPI PDSLDTLMEF INRMEQALSQ NGYQPDTSSA GSGGRPREEL PRNRRGAATP
301: EALSVVLRNA QHLLSGLGVS SLSHIAGRLE QDGSSSDPTL RSQIQTEAVQ VGLAMQHLGA LLLELGRTIL TLRMAPSPEL SYVNAGPAVY ISPSGPNPIM
401: VQPFPHQISP LFTGATVSSN PLTGPVGLGT AQRHINIHIH AGTSGSPMLS SVGNQRSNGE GGQGDRDSNT SSVPAAVPSH STGENVSAGV QPGLGDDVSV
501: AQINARIRDM VNIMQGRDQI PSGIESLERD MSTGHGVATA MPEQPTNIAT TCAPESSSGS LHDLPSERSN SVCQNEKDLG GDLEHPARAK DTSCTTGQSS
601: APSGDATGDA KETNKATPEV ATATPLGLGL GGLDRKKRSK QPKVSGKTED SGTSATLEGV QQSSGTSGQQ LLQSLFSGSS RSDETGLRRG QGSDDRVDVS
701: SAMSQVLESP VLDGLLAGVS RQAGVDSPNM LRNMLQQFTQ NPQIMNTVQQ IAQQVDGQEI ENMMSGGAQG EGGGFDFSRM VQQMMPLVSR AFSQGGPLPH
801: PATIQPDDRQ PSQVNVQSMA QMIEHSDPPE DVFRAMVENA AISQDELVNE LCCDEALSQE YAELLRRDIE GRLKDDQGL
Arabidopsis Description
AT5g42220/K5J14_2 [Source:UniProtKB/TrEMBL;Acc:Q8L745]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.