Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G013700.2 | Wheat | nucleus | 80.58 | 88.24 |
TraesCS6D01G017100.2 | Wheat | nucleus | 80.4 | 87.04 |
TraesCS6B01G020900.1 | Wheat | nucleus | 79.26 | 86.34 |
TraesCS6A01G013800.1 | Wheat | plastid | 11.22 | 76.77 |
Os07t0498800-01 | Rice | cytosol | 33.27 | 52.69 |
KXG25466 | Sorghum | nucleus | 42.6 | 47.73 |
Zm00001d052721_P001 | Maize | plasma membrane | 37.7 | 44.2 |
CDX95199 | Canola | nucleus | 10.37 | 31.79 |
CDY42355 | Canola | nucleus | 24.03 | 31.17 |
GSMUA_Achr5P18990_001 | Banana | cytosol | 30.16 | 31.13 |
Bra027974.1-P | Field mustard | nucleus | 23.85 | 30.78 |
AT5G42220.1 | Thale cress | nucleus | 24.32 | 29.35 |
Solyc04g082160.2.1 | Tomato | nucleus | 23.37 | 28.94 |
PGSC0003DMT400025616 | Potato | plastid | 17.91 | 28.11 |
KRH17506 | Soybean | nucleus | 24.69 | 27.99 |
KRH06004 | Soybean | nucleus | 24.69 | 27.87 |
CDX95198 | Canola | nucleus | 11.59 | 26.57 |
VIT_09s0054g01880.t01 | Wine grape | nucleus | 23.47 | 26.35 |
HORVU3Hr1G014250.5 | Barley | cytosol, plastid | 18.47 | 25.82 |
Protein Annotations
EnsemblPlants:HORVU6Hr1G002580.6 | EnsemblPlantsGene:HORVU6Hr1G002580 | Gene3D:3.10.20.90 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR000626 | InterPro:Ubiquitin | InterPro:Ubiquitin-like_domsf | InterPro:Ubiquitin_CS | InterPro:Ubiquitin_dom | PANTHER:PTHR15204 |
PANTHER:PTHR15204:SF5 | PFAM:PF00240 | PFscan:PS50053 | PRINTS:PR00348 | ScanProsite:PS00299 | SEG:seg |
SMART:SM00213 | SUPFAM:SSF54236 | UniParc:UPI000B47E8AD | UniProt:A0A287T5N1 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr6H:-:6670090..6678137
Molecular Weight (calculated)
109917.0 Da
IEP (calculated)
5.152
GRAVY (calculated)
-0.394
Length
1061 amino acids
Sequence
(BLAST)
(BLAST)
0001: RDRRKDEFLH SSPESNQNPS LLLPSPPLRL RVLESHRRAA SASPSDPSAS LAAVPGRPRR PAPSPPAALR RPPLPRRPRD LGRRFPRGMA DDGASAVGGS
0101: TARDGSDGPE PATIEINIKT LESQVHKLRV DKNETVLNLK EKIVDVAGIP VEQQRLIFRG RVLKDDHLLS EYHLEDGYTL HLVARRTAEG QQSSETSEAS
0201: PNPNVNNAGN GAMLGDYMSR ETIDVMVSEG VINDIPATVR DILGNFLGMP GGMANATFSV PPDGANNGRT QPGQAPPGFS ILNHQIHVTQ LPPSGAIPRN
0301: LVIPDSMTTL LEYIDRMDQV LQNNGIPPSM DSNAQEPPTS TSDDAYLNQR FPSPEVLASV VERAQQLLGG SASSALSHLA QRIQSDAATG DASVRSQIQN
0401: ESAQLGVAIQ HLGAMLFELG RTMMTLRMGP SPANAFVNAG PAVYITPTGP SPIMVQPSFQ SAPHFGVSSI PPVFGVSGPF GIVDPSRANG VNVHGGASAT
0501: SGPSVGSTTA SATAANGESQ NAERTQGGNP SATRGLPPRT VVAAIPGFPG RSSVGVILPV QMRSQVATPN QSTGPQGSQT AVGNGSQPIS TYVVPQASTG
0601: SAISSMIAQI SAQVANALAA NPQALASLTS SVLNPAAQGP HPTTNNGAGT VSSVTSGNTQ LQNELPGSHH GQTSLNVQSH ATGAGTVPSN TSDPSLTPQD
0701: ISTVSASDVD SSQQHSVELA AASLGGQLTA ASLGEQSTGT RTGDVPLGMP AENTELKSKP SDGEAGESTK PTASGGSGPL GLGGGLQPKR RSKVAKPSGT
0801: SSNSGEAVNT SSAPRSQEAV LMGQQALQAL VSRGANASSG SVTTSQAPSS TPRSAAGMTM RRPGGEGQVD IGSMISSVLN SPVFGSLMSN VAGQPGMESS
0901: ADVRNIMEDL TQNRAVMDTL SSMVQNMDAP QRGQGGFDLS RMMQQMMPVV SQVLGGPAAR PAGTDVQPRQ NDRDVSDAVG GRSSQMDLQE ACQRIEQHDA
1001: PEDIFGAVLE TAAQAYGNDE SIEVMLEELA NDPELADEYM KLLLAQVGER VESESEAKKE S
0101: TARDGSDGPE PATIEINIKT LESQVHKLRV DKNETVLNLK EKIVDVAGIP VEQQRLIFRG RVLKDDHLLS EYHLEDGYTL HLVARRTAEG QQSSETSEAS
0201: PNPNVNNAGN GAMLGDYMSR ETIDVMVSEG VINDIPATVR DILGNFLGMP GGMANATFSV PPDGANNGRT QPGQAPPGFS ILNHQIHVTQ LPPSGAIPRN
0301: LVIPDSMTTL LEYIDRMDQV LQNNGIPPSM DSNAQEPPTS TSDDAYLNQR FPSPEVLASV VERAQQLLGG SASSALSHLA QRIQSDAATG DASVRSQIQN
0401: ESAQLGVAIQ HLGAMLFELG RTMMTLRMGP SPANAFVNAG PAVYITPTGP SPIMVQPSFQ SAPHFGVSSI PPVFGVSGPF GIVDPSRANG VNVHGGASAT
0501: SGPSVGSTTA SATAANGESQ NAERTQGGNP SATRGLPPRT VVAAIPGFPG RSSVGVILPV QMRSQVATPN QSTGPQGSQT AVGNGSQPIS TYVVPQASTG
0601: SAISSMIAQI SAQVANALAA NPQALASLTS SVLNPAAQGP HPTTNNGAGT VSSVTSGNTQ LQNELPGSHH GQTSLNVQSH ATGAGTVPSN TSDPSLTPQD
0701: ISTVSASDVD SSQQHSVELA AASLGGQLTA ASLGEQSTGT RTGDVPLGMP AENTELKSKP SDGEAGESTK PTASGGSGPL GLGGGLQPKR RSKVAKPSGT
0801: SSNSGEAVNT SSAPRSQEAV LMGQQALQAL VSRGANASSG SVTTSQAPSS TPRSAAGMTM RRPGGEGQVD IGSMISSVLN SPVFGSLMSN VAGQPGMESS
0901: ADVRNIMEDL TQNRAVMDTL SSMVQNMDAP QRGQGGFDLS RMMQQMMPVV SQVLGGPAAR PAGTDVQPRQ NDRDVSDAVG GRSSQMDLQE ACQRIEQHDA
1001: PEDIFGAVLE TAAQAYGNDE SIEVMLEELA NDPELADEYM KLLLAQVGER VESESEAKKE S
001: MEDQPINQCS SSTNASEKTP ESTLELNIKT LDSRTYTFQV NKNETVLLFK EKIASETGVP VGQQRLIFRG RVLKDDHPLS EYHLENGHTL HLIVRQPAES
101: APSSGTPSQG ATANDGNNTN GGPSRNGRHV SHSVVLGSFN VGDQTEGIVP DLSRVIGAVL NSFGVSGQLP TNHSTNGTQS SMPSNQSSNA PPGNTSDGEP
201: GIGGQSQATG HSQPRQAFPG VSFQTSMPRV VQIPVTAATT IPIPSFLTPI PDSLDTLMEF INRMEQALSQ NGYQPDTSSA GSGGRPREEL PRNRRGAATP
301: EALSVVLRNA QHLLSGLGVS SLSHIAGRLE QDGSSSDPTL RSQIQTEAVQ VGLAMQHLGA LLLELGRTIL TLRMAPSPEL SYVNAGPAVY ISPSGPNPIM
401: VQPFPHQISP LFTGATVSSN PLTGPVGLGT AQRHINIHIH AGTSGSPMLS SVGNQRSNGE GGQGDRDSNT SSVPAAVPSH STGENVSAGV QPGLGDDVSV
501: AQINARIRDM VNIMQGRDQI PSGIESLERD MSTGHGVATA MPEQPTNIAT TCAPESSSGS LHDLPSERSN SVCQNEKDLG GDLEHPARAK DTSCTTGQSS
601: APSGDATGDA KETNKATPEV ATATPLGLGL GGLDRKKRSK QPKVSGKTED SGTSATLEGV QQSSGTSGQQ LLQSLFSGSS RSDETGLRRG QGSDDRVDVS
701: SAMSQVLESP VLDGLLAGVS RQAGVDSPNM LRNMLQQFTQ NPQIMNTVQQ IAQQVDGQEI ENMMSGGAQG EGGGFDFSRM VQQMMPLVSR AFSQGGPLPH
801: PATIQPDDRQ PSQVNVQSMA QMIEHSDPPE DVFRAMVENA AISQDELVNE LCCDEALSQE YAELLRRDIE GRLKDDQGL
101: APSSGTPSQG ATANDGNNTN GGPSRNGRHV SHSVVLGSFN VGDQTEGIVP DLSRVIGAVL NSFGVSGQLP TNHSTNGTQS SMPSNQSSNA PPGNTSDGEP
201: GIGGQSQATG HSQPRQAFPG VSFQTSMPRV VQIPVTAATT IPIPSFLTPI PDSLDTLMEF INRMEQALSQ NGYQPDTSSA GSGGRPREEL PRNRRGAATP
301: EALSVVLRNA QHLLSGLGVS SLSHIAGRLE QDGSSSDPTL RSQIQTEAVQ VGLAMQHLGA LLLELGRTIL TLRMAPSPEL SYVNAGPAVY ISPSGPNPIM
401: VQPFPHQISP LFTGATVSSN PLTGPVGLGT AQRHINIHIH AGTSGSPMLS SVGNQRSNGE GGQGDRDSNT SSVPAAVPSH STGENVSAGV QPGLGDDVSV
501: AQINARIRDM VNIMQGRDQI PSGIESLERD MSTGHGVATA MPEQPTNIAT TCAPESSSGS LHDLPSERSN SVCQNEKDLG GDLEHPARAK DTSCTTGQSS
601: APSGDATGDA KETNKATPEV ATATPLGLGL GGLDRKKRSK QPKVSGKTED SGTSATLEGV QQSSGTSGQQ LLQSLFSGSS RSDETGLRRG QGSDDRVDVS
701: SAMSQVLESP VLDGLLAGVS RQAGVDSPNM LRNMLQQFTQ NPQIMNTVQQ IAQQVDGQEI ENMMSGGAQG EGGGFDFSRM VQQMMPLVSR AFSQGGPLPH
801: PATIQPDDRQ PSQVNVQSMA QMIEHSDPPE DVFRAMVENA AISQDELVNE LCCDEALSQE YAELLRRDIE GRLKDDQGL
Arabidopsis Description
AT5g42220/K5J14_2 [Source:UniProtKB/TrEMBL;Acc:Q8L745]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.