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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 49.73 71.54
TraesCS5B01G240800.1 Wheat extracellular, golgi 66.58 67.66
TraesCS5A01G242800.1 Wheat extracellular, plasma membrane 66.84 67.57
HORVU2Hr1G093140.1 Barley cytosol 58.29 67.28
Os09t0461900-01 Rice cytosol, plasma membrane 57.49 66.98
TraesCS5D01G249400.1 Wheat endoplasmic reticulum, plasma membrane 66.04 66.04
Zm00001d005909_P001 Maize plasma membrane 55.88 57.89
KXG35783 Sorghum extracellular, vacuole 55.35 57.02
HORVU5Hr1G017510.2 Barley cytosol 33.96 39.69
GSMUA_Achr6P04360_001 Banana cytosol 31.02 39.59
GSMUA_Achr6P04230_001 Banana cytosol 24.6 39.32
GSMUA_Achr7P12950_001 Banana cytosol 32.62 37.77
PGSC0003DMT400066384 Potato cytosol 20.59 37.56
GSMUA_Achr3P06860_001 Banana cytosol 24.6 37.55
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 34.49 37.28
HORVU0Hr1G013170.1 Barley cytosol 32.09 36.36
HORVU6Hr1G005900.1 Barley cytosol 31.02 36.02
HORVU0Hr1G005140.1 Barley extracellular 30.21 35.76
HORVU5Hr1G069110.1 Barley cytosol 30.75 35.49
HORVU5Hr1G069140.1 Barley cytosol 30.75 35.49
VIT_03s0063g00750.t01 Wine grape cytosol 30.48 35.29
VIT_03s0063g00740.t01 Wine grape cytosol 30.21 35.09
Solyc01g108560.2.1 Tomato cytosol, plastid 28.07 34.88
KRH71164 Soybean cytosol 28.07 34.54
PGSC0003DMT400066389 Potato cytosol 26.74 34.25
Bra025714.1-P Field mustard cytosol 21.66 34.03
HORVU5Hr1G068140.1 Barley cytosol 29.41 33.95
PGSC0003DMT400066392 Potato cytosol 28.34 33.87
PGSC0003DMT400066386 Potato cytosol 28.07 33.65
KRH50255 Soybean cytosol 27.27 33.55
AT2G03550.1 Thale cress cytosol 27.81 33.33
Solyc01g108540.2.1 Tomato cytosol 27.54 33.33
Solyc01g108570.2.1 Tomato cytosol, extracellular 27.54 33.23
VIT_03s0063g00700.t01 Wine grape cytosol 28.61 33.13
VIT_03s0063g00720.t01 Wine grape cytosol 28.61 33.13
CDX77920 Canola cytosol 27.54 33.01
PGSC0003DMT400091080 Potato cytosol 27.54 33.01
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 32.89 32.98
Solyc01g108530.2.1 Tomato cytosol 27.01 32.9
VIT_03s0063g00820.t01 Wine grape cytosol 26.47 32.89
Bra029912.1-P Field mustard cytosol 28.34 32.82
HORVU2Hr1G110800.1 Barley cytosol 28.34 32.82
AT3G48690.1 Thale cress cytosol 28.34 32.72
KRH50256 Soybean cytosol 27.81 32.7
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 32.89 32.63
HORVU3Hr1G022640.1 Barley mitochondrion 31.82 32.6
PGSC0003DMT400066385 Potato cytosol 26.74 32.57
AT3G48700.1 Thale cress cytosol 28.61 32.52
Solyc01g108580.2.1 Tomato cytosol 27.01 32.37
Bra025117.1-P Field mustard cytosol 26.2 32.24
VIT_03s0063g00830.t01 Wine grape cytosol 25.94 32.12
VIT_03s0063g00800.t01 Wine grape cytosol 25.67 32.0
VIT_03s0063g00730.t01 Wine grape cytosol 27.27 31.88
HORVU5Hr1G068800.1 Barley plastid 32.35 31.84
KRH71163 Soybean cytosol 25.67 31.79
CDY37916 Canola cytosol 27.27 31.58
CDY67024 Canola cytosol 27.27 31.58
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 20.32 31.54
AT1G19190.1 Thale cress cytosol 26.74 31.45
Bra019558.1-P Field mustard cytosol 27.01 31.27
CDX68486 Canola cytosol 27.01 31.27
CDY41024 Canola peroxisome 27.01 31.27
CDY28094 Canola cytosol 26.74 31.15
KRH71161 Soybean cytosol 22.73 31.14
Bra016519.1-P Field mustard cytosol 27.01 30.89
CDX83045 Canola cytosol 26.74 30.86
Bra018807.1-P Field mustard cytosol 26.74 30.67
Bra029913.1-P Field mustard cytosol 26.74 30.67
VIT_03s0063g00810.t01 Wine grape cytosol 25.67 30.67
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 24.6 30.67
CDY51033 Canola cytosol 26.2 30.62
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 25.67 30.48
CDX96674 Canola cytosol 26.47 30.46
CDY28098 Canola cytosol 26.2 30.43
CDY51035 Canola cytosol 26.47 30.37
KRH71162 Soybean cytosol, nucleus 27.01 30.33
Bra018809.1-P Field mustard cytosol 25.4 30.06
VIT_03s0063g00790.t01 Wine grape cytosol 24.06 29.9
Bra040667.1-P Field mustard cytosol 25.4 29.78
PGSC0003DMT400088862 Potato cytosol 27.27 29.65
HORVU5Hr1G093500.4 Barley plastid 29.41 29.65
HORVU5Hr1G098770.1 Barley plasma membrane 28.61 29.56
AT1G49660.1 Thale cress cytosol 25.13 29.47
CDY29339 Canola cytosol 25.13 29.47
Solyc10g050880.1.1 Tomato cytosol 24.33 29.17
CDY20870 Canola cytosol 24.87 29.15
PGSC0003DMT400066383 Potato cytosol 22.73 27.96
CDY02986 Canola cytosol 26.2 27.76
AT1G49640.1 Thale cress cytosol 22.99 27.3
Bra018808.1-P Field mustard plastid 27.81 27.3
KRH50257 Soybean cytosol 23.53 27.08
CDY28095 Canola plastid 27.27 26.84
CDY51034 Canola plastid 27.27 26.84
KRH71160 Soybean nucleus 27.01 25.7
CDY16521 Canola mitochondrion 25.94 25.53
Bra014213.1-P Field mustard mitochondrion 25.67 25.26
HORVU2Hr1G067270.2 Barley cytosol 28.34 25.18
HORVU5Hr1G068960.1 Barley cytosol 28.34 25.18
CDY32845 Canola mitochondrion 24.33 24.86
VIT_03s0063g00770.t01 Wine grape plastid 27.54 24.76
AT1G49650.1 Thale cress mitochondrion 24.33 24.33
HORVU2Hr1G002620.1 Barley cytosol 25.94 23.66
HORVU7Hr1G009170.1 Barley cytosol 26.47 23.46
HORVU0Hr1G004410.1 Barley cytosol 27.27 23.34
HORVU2Hr1G003300.1 Barley cytosol 26.2 20.55
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 27.27 16.56
Protein Annotations
EnsemblPlants:HORVU0Hr1G013200.3EnsemblPlantsGene:HORVU0Hr1G013200Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF171PFAM:PF07859SEG:segSUPFAM:SSF53474MapMan:35.1:
Description
No Description!
Coordinates
chrchrUn:-:75848321..75849586
Molecular Weight (calculated)
30397.8 Da
IEP (calculated)
6.594
GRAVY (calculated)
-0.037
Length
374 amino acids
Sequence
(BLAST)
001: XQFVLQNRRD DCCGQLSSSP RSSLRSTNSX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXSNGVASKD
101: VVLDPAASIS ARLYLPAAAA AEPGKKFPVV IFFHGGAFFV HTAASPLYHR YCASLAAAVP AVVVSVDYRL APEHPIPAAY EDAFAALKAV VGACRPGGAE
201: PWLAAHGDAS RVVLAGDSAG ANMAHATAIR LGKEGIDGYG DKVSGVALLN PYFWGKQPVG GEPTDAGYXX XXXXXXXXXX XXXXXXXXXX XXPATAPEEW
301: RRLGSGRVLV TTAEHCWFVE RARAYAEGIK ACGWDGELQF HETKGEAHVY FLPKYDSDTA VEELAMVADF VRRC
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.