Skip to main content
crop-pal logo
Barley
Search for another protein from :
Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G017100.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 HORVU0Hr1G017100.2 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU2Hr1G067270.2 Barley cytosol 98.1 98.1
TraesCS5D01G248100.1 Wheat plastid 83.61 93.37
TraesCS5A01G241700.1 Wheat plastid 83.14 93.09
TraesCS5B01G239700.1 Wheat plastid 85.99 88.51
Zm00001d020732_P001 Maize plastid 52.26 70.97
Os09t0460300-01 Rice plastid 61.28 66.67
HORVU5Hr1G068800.1 Barley plastid 57.48 63.68
OQU89623 Sorghum mitochondrion 57.01 62.83
HORVU5Hr1G068140.1 Barley cytosol 39.19 50.93
HORVU6Hr1G005900.1 Barley cytosol 37.77 49.38
GSMUA_Achr3P06860_001 Banana cytosol 28.03 48.16
GSMUA_Achr6P04360_001 Banana cytosol 32.78 47.1
GSMUA_Achr6P04230_001 Banana cytosol 25.42 45.73
HORVU5Hr1G017510.2 Barley cytosol 33.73 44.38
HORVU2Hr1G110800.1 Barley cytosol 33.73 43.96
PGSC0003DMT400066384 Potato cytosol 20.43 41.95
HORVU5Hr1G069110.1 Barley cytosol 31.83 41.36
HORVU5Hr1G069140.1 Barley cytosol 31.83 41.36
HORVU2Hr1G093140.1 Barley cytosol 31.12 40.43
PGSC0003DMT400066385 Potato cytosol 29.45 40.39
Solyc01g108530.2.1 Tomato cytosol 29.22 40.07
KRH50255 Soybean cytosol 28.74 39.8
HORVU3Hr1G022640.1 Barley mitochondrion 34.44 39.73
GSMUA_Achr7P12950_001 Banana cytosol 30.4 39.63
KRH50256 Soybean cytosol 29.93 39.62
VIT_03s0063g00830.t01 Wine grape cytosol 28.27 39.4
VIT_03s0063g00730.t01 Wine grape cytosol 29.93 39.38
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 32.3 39.31
VIT_03s0063g00750.t01 Wine grape cytosol 29.93 39.01
HORVU0Hr1G005140.1 Barley extracellular 29.22 38.92
KRH71164 Soybean cytosol 27.79 38.49
HORVU5Hr1G093500.4 Barley plastid 33.73 38.27
VIT_03s0063g00790.t01 Wine grape cytosol 27.32 38.21
KRH71161 Soybean cytosol 24.7 38.1
VIT_03s0063g00820.t01 Wine grape cytosol 27.08 37.87
Solyc10g050880.1.1 Tomato cytosol 28.03 37.82
VIT_03s0063g00720.t01 Wine grape cytosol 28.98 37.77
VIT_03s0063g00700.t01 Wine grape cytosol 28.74 37.46
KRH71163 Soybean cytosol 26.84 37.42
VIT_03s0063g00810.t01 Wine grape cytosol 27.79 37.38
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 26.6 37.33
VIT_03s0063g00800.t01 Wine grape cytosol 26.6 37.33
VIT_03s0063g00740.t01 Wine grape cytosol 28.27 36.96
CDX83045 Canola cytosol 28.27 36.73
CDX77920 Canola cytosol 27.08 36.54
Bra019558.1-P Field mustard cytosol 28.03 36.53
CDX68486 Canola cytosol 28.03 36.53
CDY37916 Canola cytosol 28.03 36.53
PGSC0003DMT400066383 Potato cytosol 26.37 36.51
Bra029913.1-P Field mustard cytosol 28.27 36.5
KRH71162 Soybean cytosol, nucleus 28.74 36.34
Solyc01g108570.2.1 Tomato cytosol, extracellular 26.6 36.13
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 31.83 35.92
AT3G48690.1 Thale cress cytosol 27.55 35.8
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 31.83 35.54
CDY28094 Canola cytosol 27.08 35.51
HORVU0Hr1G013170.1 Barley cytosol 27.79 35.45
Bra018807.1-P Field mustard cytosol 27.32 35.28
CDY51035 Canola cytosol 27.32 35.28
PGSC0003DMT400066386 Potato cytosol 26.13 35.26
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 26.37 35.24
PGSC0003DMT400066392 Potato cytosol 26.13 35.14
PGSC0003DMT400091080 Potato cytosol 25.89 34.94
Solyc01g108580.2.1 Tomato cytosol 25.89 34.94
PGSC0003DMT400066389 Potato cytosol 24.23 34.93
Solyc01g108560.2.1 Tomato cytosol, plastid 24.94 34.88
AT1G49660.1 Thale cress cytosol 26.37 34.8
Bra040667.1-P Field mustard cytosol 26.37 34.8
CDY29339 Canola cytosol 26.37 34.8
AT3G48700.1 Thale cress cytosol 27.08 34.65
Solyc01g108540.2.1 Tomato cytosol 25.42 34.63
AT1G49640.1 Thale cress cytosol 25.89 34.6
AT1G19190.1 Thale cress cytosol 26.13 34.59
CDY20870 Canola cytosol 26.13 34.48
CDX96674 Canola cytosol 26.6 34.46
CDY67024 Canola cytosol 26.13 34.06
HORVU5Hr1G098770.1 Barley plasma membrane 29.22 33.98
Bra025117.1-P Field mustard cytosol 24.47 33.88
Bra016519.1-P Field mustard cytosol 26.13 33.64
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 19.24 33.61
CDY28098 Canola cytosol 25.42 33.23
CDY16521 Canola mitochondrion 29.93 33.16
Bra029912.1-P Field mustard cytosol 25.42 33.13
CDY41024 Canola peroxisome 25.42 33.13
Bra014213.1-P Field mustard mitochondrion 29.69 32.89
CDY51033 Canola cytosol 24.94 32.81
Bra025714.1-P Field mustard cytosol 18.53 32.77
KRH50257 Soybean cytosol 25.18 32.62
AT2G03550.1 Thale cress cytosol 23.75 32.05
Bra018809.1-P Field mustard cytosol 23.99 31.96
PGSC0003DMT400088862 Potato cytosol 25.89 31.69
KRH71160 Soybean nucleus 29.45 31.55
HORVU2Hr1G002620.1 Barley cytosol 30.17 30.98
CDY32845 Canola mitochondrion 26.84 30.87
CDY28095 Canola plastid 27.32 30.26
CDY51034 Canola plastid 27.32 30.26
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 18.53 30.0
Bra018808.1-P Field mustard plastid 27.08 29.92
CDY02986 Canola cytosol 24.7 29.46
AT1G49650.1 Thale cress mitochondrion 26.13 29.41
VIT_03s0063g00770.t01 Wine grape plastid 28.74 29.09
HORVU0Hr1G013200.3 Barley plastid 25.18 28.34
HORVU0Hr1G004410.1 Barley cytosol 29.22 28.15
HORVU7Hr1G009170.1 Barley cytosol 27.79 27.73
HORVU2Hr1G003300.1 Barley cytosol 29.22 25.79
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 29.22 19.97
Protein Annotations
EnsemblPlants:HORVU5Hr1G068960.1EnsemblPlantsGene:HORVU5Hr1G068960Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_AS
PANTHER:PTHR23024PANTHER:PTHR23024:SF257PFAM:PF07859ScanProsite:PS01174SEG:segSUPFAM:SSF53474
UniParc:UPI000294AEB7UniProt:M0YSX4MapMan:35.1:::
Description
No Description!
Coordinates
chrchr5H:+:519813198..519816392
Molecular Weight (calculated)
45256.8 Da
IEP (calculated)
6.148
GRAVY (calculated)
-0.104
Length
421 amino acids
Sequence
(BLAST)
001: MPIRSPSLAM HTYMADDDTA PRPHHQFTTH RVILLLTAPR HSMATRSAAA VWAGSGWAAP QPCRPLTVRR RKLPRLPCYL STTFPPCPGI CTSSSHKNRA
101: LPAAATEAET EDEVLLESPG HFRIYKCGKM DRLNEPTVSP AGLDEATGVT SRDVVLDADT GVSVRLYLPK LREPSEKLPV LVYFHGGAFL IGSADDATYH
201: SYVNALAAAA GVLVVSADYR LAPEHPLPTA YDDCWAALQW TVAPSTQDEW IARHGDTARL FLAGDSAGAN IVHEMLVRAA AAASGPRMEG AVLLHPWFSG
301: SEAIEGEPPA VPMFNGMIWS YTCPGAVGGA DDPRINPLAP GASSLEKLAC ERMLVCAAEK DVLARRIRAY YEGVAAGACR APGAAAWFES EGEDHDFFLG
401: KTDCERAKQL LDRVAAFIAE G
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.