CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	OQU84317	AT4G10930.1	21798944
AT3G48690.1	OQU85411	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020732_P001	Maize	plastid	72.25	89.03
TraesCS5D01G249100.1	Wheat	cytosol	63.61	78.14
Os09t0460400-01	Rice	cytosol	61.52	74.6
Os09t0460300-01	Rice	plastid	68.85	67.96
OQU89622	Sorghum	cytosol	53.93	64.78
TraesCS5B01G239300.1	Wheat	plastid	62.57	62.89
HORVU5Hr1G068800.1	Barley	plastid	62.04	62.37
TraesCS5D01G248100.1	Wheat	plastid	61.26	62.07
TraesCS5A01G241700.1	Wheat	plastid	60.99	61.97
TraesCS5D01G247700.1	Wheat	plastid	61.26	60.78
TraesCS5A01G241200.1	Wheat	plastid	60.47	60.0
HORVU5Hr1G068960.1	Barley	cytosol	62.83	57.01
TraesCS5B01G239700.1	Wheat	plastid	60.73	56.72
HORVU2Hr1G067270.2	Barley	cytosol	62.3	56.53
KXG35781	Sorghum	cytosol	45.29	55.27
EER88163	Sorghum	cytosol	42.41	51.1
GSMUA_Achr6P04360_001	Banana	cytosol	39.01	50.85
GSMUA_Achr3P06860_001	Banana	cytosol	32.46	50.61
GSMUA_Achr6P04230_001	Banana	cytosol	30.89	50.43
KXG35760	Sorghum	cytosol	42.41	50.0
KXG26418	Sorghum	cytosol	41.62	47.89
KXG35761	Sorghum	cytosol	40.84	47.85
OQU85176	Sorghum	plastid	42.67	47.8
KXG35782	Sorghum	cytosol	42.15	47.77
GSMUA_Achr7P12950_001	Banana	cytosol	39.01	46.13
OQU80639	Sorghum	cytosol	40.31	46.11
EER99019	Sorghum	cytosol	39.27	45.87
KXG19591	Sorghum	cytosol	38.48	45.37
EES16153	Sorghum	cytosol	39.01	44.48
OQU81663	Sorghum	cytosol	41.36	44.38
KXG21709	Sorghum	cytosol, mitochondrion, plastid	32.46	44.29
KXG25394	Sorghum	cytosol	37.7	43.64
KRH71161	Soybean	cytosol	31.15	43.59
PGSC0003DMT400066384	Potato	cytosol	23.3	43.41
KRH50256	Soybean	cytosol	36.13	43.4
PGSC0003DMT400066385	Potato	cytosol	34.82	43.32
KRH50255	Soybean	cytosol	34.29	43.09
KRH71164	Soybean	cytosol	34.29	43.09
KXG25323	Sorghum	cytosol	36.91	42.73
Solyc01g108530.2.1	Tomato	cytosol	34.29	42.67
VIT_03s0063g00800.t01	Wine grape	cytosol	33.51	42.67
VIT_03s0063g00790.t01	Wine grape	cytosol	33.51	42.52
EER88069	Sorghum	cytosol	36.91	42.34
VIT_03s0063g00820.t01	Wine grape	cytosol	32.98	41.86
EER89413	Sorghum	cytosol	37.17	41.76
AT3G48690.1	Thale cress	cytosol	35.34	41.67
CDY28094	Canola	cytosol	34.82	41.43
PGSC0003DMT400091080	Potato	cytosol	33.77	41.35
Solyc01g108540.2.1	Tomato	cytosol	33.25	41.1
Solyc01g108580.2.1	Tomato	cytosol	33.51	41.03
EER96865	Sorghum	cytosol	35.08	40.98
Solyc01g108570.2.1	Tomato	cytosol, extracellular	33.25	40.97
VIT_03s0063g00810.t01	Wine grape	cytosol	33.51	40.89
Bra019558.1-P	Field mustard	cytosol	34.55	40.87
CDY37916	Canola	cytosol	34.55	40.87
Solyc01g108560.2.1	Tomato	cytosol, plastid	32.2	40.86
Bra018807.1-P	Field mustard	cytosol	34.82	40.8
Bra040667.1-P	Field mustard	cytosol	34.03	40.75
VIT_03s0063g00700.t01	Wine grape	cytosol	34.29	40.56
VIT_03s0063g00720.t01	Wine grape	cytosol	34.29	40.56
CDY51035	Canola	cytosol	34.55	40.49
CDY20870	Canola	cytosol	33.77	40.44
VIT_03s0063g00830.t01	Wine grape	cytosol	31.94	40.4
KXG35780	Sorghum	extracellular, vacuole	37.43	40.4
CDX77920	Canola	cytosol	32.98	40.38
PGSC0003DMT400066386	Potato	cytosol	32.98	40.38
VIT_03s0063g00750.t01	Wine grape	cytosol	34.03	40.25
CDY29339	Canola	cytosol	33.51	40.13
CDX83045	Canola	cytosol	34.03	40.12
PGSC0003DMT400066389	Potato	cytosol	30.63	40.07
KRH71163	Soybean	cytosol	31.68	40.07
CDX68486	Canola	cytosol	33.77	39.94
PGSC0003DMT400066392	Potato	cytosol	32.72	39.94
Bra029913.1-P	Field mustard	cytosol	34.03	39.88
Bra025117.1-P	Field mustard	cytosol	31.68	39.8
VIT_03s0063g00740.t01	Wine grape	cytosol	33.51	39.75
AT2G03550.1	Thale cress	cytosol	32.46	39.74
VIT_03s0063g00730.t01	Wine grape	cytosol	33.25	39.69
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	31.15	39.67
AT1G49660.1	Thale cress	cytosol	32.98	39.5
Solyc10g050880.1.1	Tomato	cytosol	32.2	39.42
AT3G48700.1	Thale cress	cytosol	33.77	39.21
KXG35783	Sorghum	extracellular, vacuole	37.17	39.12
KRH71162	Soybean	cytosol, nucleus	34.03	39.04
CDY67024	Canola	cytosol	32.98	39.01
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	36.13	38.87
AT1G49640.1	Thale cress	cytosol	31.94	38.73
Bra029912.1-P	Field mustard	cytosol	32.72	38.7
AT1G19190.1	Thale cress	cytosol	31.94	38.36
CDY28098	Canola	cytosol	32.2	38.2
PGSC0003DMT400066383	Potato	cytosol	30.37	38.16
CDY51033	Canola	cytosol	31.68	37.81
KXG35785	Sorghum	extracellular, golgi, vacuole	36.91	37.4
EES15127	Sorghum	extracellular	36.65	37.33
KRH50257	Soybean	cytosol	31.68	37.23
CDY41024	Canola	peroxisome	31.41	37.15
Bra018809.1-P	Field mustard	cytosol	30.63	37.03
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	30.37	36.83
CDX96674	Canola	cytosol	30.89	36.31
Bra025714.1-P	Field mustard	cytosol	22.51	36.13
PGSC0003DMT400088862	Potato	cytosol	32.46	36.05
KRH71160	Soybean	nucleus	36.91	35.88
CDY16521	Canola	mitochondrion	35.6	35.79
OQU80637	Sorghum	plasma membrane	36.91	35.61
Bra014213.1-P	Field mustard	mitochondrion	35.34	35.53
Bra016519.1-P	Field mustard	cytosol	30.1	35.17
AT1G49650.1	Thale cress	mitochondrion	33.77	34.49
CDY28095	Canola	plastid	34.29	34.47
CDY02986	Canola	cytosol	31.68	34.28
CDY51034	Canola	plastid	34.03	34.21
Bra018808.1-P	Field mustard	plastid	34.03	34.12
CDY32845	Canola	mitochondrion	31.94	33.33
VIT_03s0063g00770.t01	Wine grape	plastid	33.77	31.01
OQU76051	Sorghum	golgi, plasma membrane, vacuole	36.91	29.07
EER97903	Sorghum	cytosol	32.72	27.59
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	35.08	21.75

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1W0W5K0	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	InterPro:Lipase_GDXG_HIS_AS
InterPro:Lipase_GDXG_put_SER_AS	EnsemblPlants:OQU89623	ProteinID:OQU89623	ProteinID:OQU89623.1	PFAM:PF07859	ScanProsite:PS01173
ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF257	EnsemblPlantsGene:SORBI_3002G227700	SUPFAM:SSF53474	UniParc:UPI0009DC92A5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:61945121..61947922

Molecular Weight (calculated)

40632.2 Da

IEP (calculated)

6.508

GRAVY (calculated)

-0.107

Length

382 amino acids

Sequence
(BLAST)

001: MRRALCHKIP CCGRTTAGPR ILSTPWIPAI WPGSVATGIN FPSQKDPSYY HRKSANFSTK VTPSSPPSTA MEPGADEVAF ESSAHFRIYK SGRIERLNRP
101: PVLPAGLDDA TGVTSKDVVL DADTGLSVRL YLPKLQQERP SKKLPVLVYF HGGAFLIESA GSATYHAYVN PLAAAAGALV VSVSYRLAPE HPLPAAYDDS
201: WAALQWAASA RDEWIAEHGD TARLFLAGDS AGANIVHDML MRAASARGPR IEGAVLLHPW FGGSAPIEGE PPGPAAGTAG LWTYACPGAV GGADDPRMNP
301: LAPGAPALEK LGCARMLVCA GTLDALYRRD RAYYEAVAAS AWPGDVAWLE SEGEDHDFFL GKPECENAKQ LMDRVVAFIA GA

Best Arabidopsis Sequence Match ( AT3G48690.1 )
(BLAST)

001: MDSEIAVDCS PLLKIYKSGR IERLMGEATV PPSSEPQNGV VSKDVVYSAD NNLSVRIYLP EKAAAETDSK LPLLVYFHGG GFIIETAFSP TYHTFLTTSV
101: SASNCVAVSV DYRRAPEHPI SVPFDDSWTA LKWVFTHITG SGQEDWLNKH ADFSRVFLSG DSAGANIVHH MAMRAAKEKL SPGLNDTGIS GIILLHPYFW
201: SKTPIDEKDT KDETLRMKIE AFWMMASPNS KDGTDDPLLN VVQSESVDLS GLGCGKVLVM VAEKDALVRQ GWGYAAKLEK SGWKGEVEVV ESEGEDHVFH
301: LLKPECDNAI EVMHKFSGFI KGGN

Arabidopsis Description

CXE12Probable carboxylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.