Factsheet for TraesCS5B01G239300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G241200.1	Wheat	plastid	91.84	90.65
TraesCS5D01G247700.1	Wheat	plastid	91.05	89.87
HORVU5Hr1G068800.1	Barley	plastid	88.42	88.42
Zm00001d020732_P001	Maize	plastid	59.21	72.58
Os09t0460400-01	Rice	cytosol	58.16	70.16
OQU89623	Sorghum	mitochondrion	62.89	62.57
TraesCS5B01G240500.1	Wheat	cytosol	50.53	60.57
TraesCS5B01G239700.1	Wheat	plastid	62.63	58.19
TraesCS5B01G235400.1	Wheat	cytosol	43.16	50.62
GSMUA_Achr3P06860_001	Banana	cytosol	32.63	50.61
GSMUA_Achr6P04360_001	Banana	cytosol	38.68	50.17
GSMUA_Achr6P04230_001	Banana	cytosol	30.79	50.0
TraesCS6B01G046900.1	Wheat	mitochondrion	29.74	49.56
TraesCS3B01G141200.1	Wheat	cytosol	39.74	47.94
TraesCS5B01G059800.1	Wheat	cytosol	38.16	46.62
TraesCS6B01G047900.1	Wheat	cytosol	39.47	46.15
TraesCS5B01G240000.1	Wheat	cytosol	38.68	45.51
TraesCS7B01G077300.1	Wheat	peroxisome	38.42	45.06
TraesCS4B01G135300.1	Wheat	cytosol	37.63	44.55
GSMUA_Achr7P12950_001	Banana	cytosol	37.63	44.27
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	40.26	43.71
PGSC0003DMT400066384	Potato	cytosol	23.42	43.41
TraesCS7B01G077500.1	Wheat	golgi	36.84	43.34
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	37.63	42.69
TraesCS2B01G409800.1	Wheat	cytosol	36.84	42.04
TraesCS4B01G331200.1	Wheat	cytosol	35.53	41.93
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	37.89	41.86
TraesCS2B01G526100.1	Wheat	cytosol	35.53	41.8
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	41.05	41.49
KRH50255	Soybean	cytosol	33.16	41.45
TraesCS5B01G241000.1	Wheat	cytosol	35.26	41.36
KRH71164	Soybean	cytosol	32.63	40.79
PGSC0003DMT400066385	Potato	cytosol	32.89	40.72
Solyc01g108530.2.1	Tomato	cytosol	32.89	40.72
PGSC0003DMT400091080	Potato	cytosol	33.42	40.71
Solyc01g108570.2.1	Tomato	cytosol, extracellular	32.89	40.32
Solyc01g108560.2.1	Tomato	cytosol, plastid	31.84	40.2
Solyc01g108540.2.1	Tomato	cytosol	32.63	40.13
TraesCS5B01G439900.2	Wheat	cytosol	35.26	40.12
VIT_03s0063g00800.t01	Wine grape	cytosol	31.58	40.0
TraesCS5B01G240400.1	Wheat	mitochondrion	35.53	39.94
KRH50256	Soybean	cytosol	33.42	39.94
Solyc01g108580.2.1	Tomato	cytosol	32.63	39.74
PGSC0003DMT400066389	Potato	cytosol	30.53	39.73
PGSC0003DMT400066392	Potato	cytosol	32.63	39.62
PGSC0003DMT400066386	Potato	cytosol	32.37	39.42
VIT_03s0063g00750.t01	Wine grape	cytosol	33.42	39.32
VIT_03s0063g00820.t01	Wine grape	cytosol	31.05	39.2
VIT_03s0063g00810.t01	Wine grape	cytosol	32.11	38.98
VIT_03s0063g00790.t01	Wine grape	cytosol	30.79	38.87
KRH71161	Soybean	cytosol	27.89	38.83
KRH71163	Soybean	cytosol	30.79	38.74
VIT_03s0063g00700.t01	Wine grape	cytosol	32.89	38.7
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	30.53	38.67
VIT_03s0063g00720.t01	Wine grape	cytosol	32.63	38.39
AT3G48690.1	Thale cress	cytosol	32.63	38.27
TraesCS2B01G381300.1	Wheat	vacuole	39.47	38.17
VIT_03s0063g00830.t01	Wine grape	cytosol	30.26	38.08
TraesCS5B01G240800.1	Wheat	extracellular, golgi	36.84	38.04
Bra025117.1-P	Field mustard	cytosol	30.26	37.83
PGSC0003DMT400066383	Potato	cytosol	30.26	37.83
VIT_03s0063g00730.t01	Wine grape	cytosol	31.84	37.81
CDY37916	Canola	cytosol	32.11	37.77
CDX77920	Canola	cytosol	30.79	37.5
Bra019558.1-P	Field mustard	cytosol	31.84	37.46
AT3G48700.1	Thale cress	cytosol	32.37	37.39
CDX83045	Canola	cytosol	31.84	37.35
VIT_03s0063g00740.t01	Wine grape	cytosol	31.58	37.27
Solyc10g050880.1.1	Tomato	cytosol	30.53	37.18
CDX68486	Canola	cytosol	31.58	37.15
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	30.79	37.14
Bra029913.1-P	Field mustard	cytosol	31.84	37.12
AT1G19190.1	Thale cress	cytosol	31.05	37.11
TraesCS2B01G335600.1	Wheat	plastid	36.58	37.07
KRH71162	Soybean	cytosol, nucleus	32.37	36.94
CDY28094	Canola	cytosol	31.05	36.76
CDX96674	Canola	cytosol	31.32	36.62
CDY67024	Canola	cytosol	31.05	36.53
Bra018807.1-P	Field mustard	cytosol	31.32	36.5
Bra040667.1-P	Field mustard	cytosol	30.53	36.36
CDY20870	Canola	cytosol	30.53	36.36
CDY29339	Canola	cytosol	30.53	36.36
CDY28098	Canola	cytosol	30.79	36.34
Bra029912.1-P	Field mustard	cytosol	30.79	36.22
AT2G03550.1	Thale cress	cytosol	29.74	36.22
CDY51035	Canola	cytosol	31.05	36.2
AT1G49640.1	Thale cress	cytosol	30.0	36.19
CDY41024	Canola	peroxisome	30.53	35.91
CDY51033	Canola	cytosol	30.0	35.62
Bra016519.1-P	Field mustard	cytosol	30.53	35.47
AT1G49660.1	Thale cress	cytosol	29.74	35.42
Bra025714.1-P	Field mustard	cytosol	22.11	35.29
PGSC0003DMT400088862	Potato	cytosol	31.84	35.17
TraesCS2B01G053400.1	Wheat	cytosol	31.58	34.78
Bra018809.1-P	Field mustard	cytosol	28.68	34.49
KRH50257	Soybean	cytosol	29.21	34.15
CDY16521	Canola	mitochondrion	33.95	33.95
Bra014213.1-P	Field mustard	mitochondrion	33.68	33.68
KRH71160	Soybean	nucleus	33.95	32.82
CDY28095	Canola	plastid	31.84	31.84
Bra018808.1-P	Field mustard	plastid	31.84	31.76
CDY02986	Canola	cytosol	29.47	31.73
CDY32845	Canola	mitochondrion	30.53	31.69
CDY51034	Canola	plastid	31.58	31.58
AT1G49650.1	Thale cress	mitochondrion	30.53	31.02
VIT_03s0063g00770.t01	Wine grape	plastid	33.68	30.77
TraesCS2B01G006100.1	Wheat	cytosol	32.89	30.41
TraesCS2B01G006500.1	Wheat	cytosol	32.89	30.41
TraesCS1B01G060800.1	Wheat	cytosol	31.58	27.03
TraesCS2B01G007100.1	Wheat	cytosol	30.79	26.17
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	34.74	21.43

Protein Annotations

EnsemblPlants:TraesCS5B01G239300.1	EnsemblPlantsGene:TraesCS5B01G239300	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
PANTHER:PTHR23024	PANTHER:PTHR23024:SF257	PFAM:PF07859	ScanProsite:PS01174	SEG:seg	SUPFAM:SSF53474
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5B:+:419727264..419728406

Molecular Weight (calculated)

40527.3 Da

IEP (calculated)

7.846

GRAVY (calculated)

-0.047

Length

380 amino acids

Sequence
(BLAST)

001: MATTIRSGVT TCTGWAATRP CRRLPLDRTR RLPQLQRPSL STTFLPQIRC PGLWRSRVRS TSDTSGAPPV TAPEPVGAGE VLLEAAGSFR IYKSGKIDRL
101: NDPTILPAGV DEATGVTSKD VVLDADTGLS VRLYLPNKLQ DASAKLPVVV YFHGGAFLIG SARDPTYHKY LNALAAAAGV LAVSVDYRLA PEHRLPAAYD
201: DSWAALLWAA SAQDKWIADH GDASRLFVAG DSAGANIAHE MLVRDGGPRI EGAILLHPWF SGNAAIEGEP PAAAKVTGLL WSYACRGSAV GGADDPRMNP
301: LASPALERLG CARMLVTTGL EDGLAARNRA YYEAVAASGW RGRAAWLELE GEGHVFFLGK LECDNAKRLM DRVVAFIADA

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.