Factsheet for TraesCS5B01G439900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G444200.1	Wheat	cytosol	96.41	96.99
TraesCS5A01G437300.1	Wheat	cytosol	95.51	96.08
Os08t0475400-02	Rice	cytosol, plasma membrane	80.24	81.96
Zm00001d050493_P001	Maize	cytosol, extracellular	78.14	79.82
KXG25323	Sorghum	cytosol	78.74	79.7
EES16153	Sorghum	cytosol	74.25	74.03
Zm00001d031805_P001	Maize	cytosol	59.28	73.06
TraesCS2B01G526100.1	Wheat	cytosol	69.76	72.14
KXG21709	Sorghum	cytosol, mitochondrion, plastid	57.48	68.57
TraesCS5B01G241000.1	Wheat	cytosol	59.58	61.42
GSMUA_Achr7P18960_001	Banana	cytosol	54.79	56.48
TraesCS7B01G077300.1	Wheat	peroxisome	48.5	50.0
TraesCS4B01G331200.1	Wheat	cytosol	44.01	45.65
VIT_03s0063g00750.t01	Wine grape	cytosol	44.01	45.51
Solyc01g108570.2.1	Tomato	cytosol, extracellular	42.22	45.48
TraesCS3B01G141200.1	Wheat	cytosol	42.81	45.4
Solyc01g108560.2.1	Tomato	cytosol, plastid	40.72	45.18
PGSC0003DMT400066389	Potato	cytosol	39.22	44.86
VIT_03s0063g00800.t01	Wine grape	cytosol	40.12	44.67
VIT_03s0063g00740.t01	Wine grape	cytosol	42.81	44.41
PGSC0003DMT400066392	Potato	cytosol	41.62	44.41
PGSC0003DMT400066384	Potato	cytosol	27.25	44.39
VIT_03s0063g00720.t01	Wine grape	cytosol	42.81	44.27
PGSC0003DMT400066386	Potato	cytosol	41.32	44.23
PGSC0003DMT400091080	Potato	cytosol	41.32	44.23
VIT_03s0063g00730.t01	Wine grape	cytosol	42.22	44.06
TraesCS7B01G077500.1	Wheat	golgi	42.52	43.96
KRH50256	Soybean	cytosol	41.62	43.71
Solyc01g108540.2.1	Tomato	cytosol	40.42	43.69
VIT_03s0063g00700.t01	Wine grape	cytosol	42.22	43.65
Solyc01g108580.2.1	Tomato	cytosol	40.72	43.59
TraesCS6B01G046900.1	Wheat	mitochondrion	29.64	43.42
TraesCS5B01G059800.1	Wheat	cytosol	40.42	43.41
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	38.92	43.33
PGSC0003DMT400066385	Potato	cytosol	39.82	43.32
Bra025117.1-P	Field mustard	cytosol	39.22	43.09
KRH71162	Soybean	cytosol, nucleus	42.81	42.94
VIT_03s0063g00790.t01	Wine grape	cytosol	38.62	42.86
VIT_03s0063g00820.t01	Wine grape	cytosol	38.62	42.86
Solyc01g108530.2.1	Tomato	cytosol	39.22	42.67
KRH71161	Soybean	cytosol	34.73	42.49
TraesCS6B01G047900.1	Wheat	cytosol	41.32	42.46
KRH50255	Soybean	cytosol	38.62	42.43
TraesCS5B01G235400.1	Wheat	cytosol	41.02	42.28
KRH71164	Soybean	cytosol	38.32	42.11
TraesCS5B01G240500.1	Wheat	cytosol	39.82	41.96
PGSC0003DMT400088862	Potato	cytosol	43.11	41.86
VIT_03s0063g00810.t01	Wine grape	cytosol	39.22	41.85
CDY28094	Canola	cytosol	40.12	41.74
VIT_03s0063g00830.t01	Wine grape	cytosol	37.72	41.72
Bra040667.1-P	Field mustard	cytosol	39.82	41.69
AT1G19190.1	Thale cress	cytosol	39.52	41.51
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	43.41	41.43
Bra018807.1-P	Field mustard	cytosol	40.42	41.41
CDY51035	Canola	cytosol	40.42	41.41
KRH71163	Soybean	cytosol	37.43	41.39
CDY29339	Canola	cytosol	39.52	41.38
CDX77920	Canola	cytosol	38.62	41.35
TraesCS5B01G240000.1	Wheat	cytosol	39.82	41.18
CDY20870	Canola	cytosol	39.22	41.07
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	41.92	40.7
AT3G48700.1	Thale cress	cytosol	39.82	40.43
TraesCS2B01G409800.1	Wheat	cytosol	40.12	40.24
TraesCS4B01G135300.1	Wheat	cytosol	38.62	40.19
Solyc10g050880.1.1	Tomato	cytosol	37.43	40.06
CDX83045	Canola	cytosol	38.62	39.81
Bra019558.1-P	Field mustard	cytosol	38.32	39.63
CDY37916	Canola	cytosol	38.32	39.63
CDY41024	Canola	peroxisome	38.32	39.63
Bra029913.1-P	Field mustard	cytosol	38.62	39.57
AT3G48690.1	Thale cress	cytosol	38.32	39.51
AT2G03550.1	Thale cress	cytosol	36.83	39.42
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	39.52	39.4
CDY51033	Canola	cytosol	37.72	39.38
CDY67024	Canola	cytosol	38.02	39.32
AT1G49660.1	Thale cress	cytosol	37.43	39.19
CDX68486	Canola	cytosol	37.72	39.01
Bra018809.1-P	Field mustard	cytosol	36.83	38.92
CDY28098	Canola	cytosol	37.43	38.82
TraesCS2B01G053400.1	Wheat	cytosol	39.82	38.55
Bra029912.1-P	Field mustard	cytosol	37.13	38.39
PGSC0003DMT400066383	Potato	cytosol	34.43	37.83
Bra025714.1-P	Field mustard	cytosol	26.95	37.82
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	35.63	37.78
TraesCS2B01G381300.1	Wheat	vacuole	44.31	37.66
KRH50257	Soybean	cytosol	36.53	37.54
CDY02986	Canola	cytosol	39.52	37.39
TraesCS5B01G240400.1	Wheat	mitochondrion	37.72	37.28
CDX96674	Canola	cytosol	36.23	37.23
TraesCS2B01G335600.1	Wheat	plastid	41.62	37.07
Bra016519.1-P	Field mustard	cytosol	35.93	36.7
AT1G49640.1	Thale cress	cytosol	34.43	36.51
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	40.42	35.9
TraesCS5B01G239300.1	Wheat	plastid	40.12	35.26
TraesCS5B01G240800.1	Wheat	extracellular, golgi	38.62	35.05
CDY51034	Canola	plastid	39.52	34.74
Bra018808.1-P	Field mustard	plastid	39.52	34.65
CDY28095	Canola	plastid	39.22	34.47
AT1G49650.1	Thale cress	mitochondrion	38.32	34.22
CDY16521	Canola	mitochondrion	38.92	34.21
Bra014213.1-P	Field mustard	mitochondrion	38.62	33.95
KRH71160	Soybean	nucleus	39.82	33.84
CDY32845	Canola	mitochondrion	36.83	33.61
TraesCS2B01G006100.1	Wheat	cytosol	40.72	33.09
TraesCS2B01G006500.1	Wheat	cytosol	40.72	33.09
TraesCS5B01G239700.1	Wheat	plastid	40.42	33.01
VIT_03s0063g00770.t01	Wine grape	plastid	40.42	32.45
TraesCS2B01G007100.1	Wheat	cytosol	42.81	31.99
TraesCS1B01G060800.1	Wheat	cytosol	40.72	30.63

Protein Annotations

EnsemblPlants:TraesCS5B01G439900.2	EnsemblPlantsGene:TraesCS5B01G439900	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF150	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:+:611952880..611953884

Molecular Weight (calculated)

35544.0 Da

IEP (calculated)

4.846

GRAVY (calculated)

0.104

Length

334 amino acids

Sequence
(BLAST)

001: MAAAAPIPAP APAADDEIVY ESMPCIRIYK NRVERYFGSE FVAASADADA ATGVASRDRV ISPEVSARLY LPRIDAAQAD AKLPVLVYYH GGGFCLGSAF
101: NPTFHAYFNN LAALAGVLVV SVEYRLAPEH PVPAAYADSW DALAWVVSHA APGAAAAAGF EPWLADHADF ARLYLGGESA GANIAHHVAM RVGAEGLPHA
201: AAIHGLLMIH PYFLGTDKVA SDDLDPAARE SLASLWRVMC PATTGEDDPL INPFVEGAPG LDALACGRVL VCIGEGDVLR DRGRAYYDRL RASGWRGEAD
301: IWQAPGKGHT FHLLEPCCEE AVAQDKVIAE FLNH

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.