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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400053153

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 PGSC0003DMT400053153 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc01g108580.2.1 Tomato cytosol 94.55 94.55
PGSC0003DMT400066386 Potato cytosol 87.82 87.82
PGSC0003DMT400066392 Potato cytosol 85.26 84.98
PGSC0003DMT400066389 Potato cytosol 74.36 79.45
PGSC0003DMT400088862 Potato cytosol 85.58 77.62
VIT_03s0063g00750.t01 Wine grape cytosol 55.45 53.56
VIT_03s0063g00740.t01 Wine grape cytosol 53.85 52.17
KRH50256 Soybean cytosol 51.6 50.63
KRH71162 Soybean cytosol, nucleus 52.88 49.55
KRH71161 Soybean cytosol 42.95 49.08
GSMUA_Achr3P06860_001 Banana cytosol 38.46 48.98
CDX77920 Canola cytosol 48.72 48.72
GSMUA_Achr9P24230_001 Banana cytosol 40.71 47.92
KRH50257 Soybean cytosol 49.68 47.69
Bra019558.1-P Field mustard cytosol 49.04 47.37
AT3G48690.1 Thale cress cytosol 49.04 47.22
AT2G03550.1 Thale cress cytosol 47.12 47.12
AT1G19190.1 Thale cress cytosol 47.76 46.86
CDY37916 Canola cytosol 48.4 46.75
PGSC0003DMT400020612 Potato cytosol 47.44 46.69
Bra025117.1-P Field mustard cytosol 45.19 46.38
PGSC0003DMT400066385 Potato cytosol 45.51 46.25
AT1G49660.1 Thale cress cytosol 47.12 46.08
Bra018807.1-P Field mustard cytosol 48.08 46.01
GSMUA_Achr6P04230_001 Banana cytosol 34.29 45.73
CDY51035 Canola cytosol 47.76 45.71
CDX83045 Canola cytosol 47.12 45.37
PGSC0003DMT400066384 Potato cytosol 29.81 45.37
CDY20870 Canola cytosol 46.15 45.14
CDY29339 Canola cytosol 46.15 45.14
PGSC0003DMT400081445 Potato cytosol 46.15 45.14
Bra029913.1-P Field mustard cytosol 47.12 45.09
TraesCS7B01G077500.1 Wheat golgi 46.47 44.89
Bra040667.1-P Field mustard cytosol 45.83 44.83
CDX68486 Canola cytosol 46.15 44.58
TraesCS5A01G243100.1 Wheat cytosol 46.15 44.44
KXG35781 Sorghum cytosol 44.55 44.41
AT3G48700.1 Thale cress cytosol 46.79 44.38
GSMUA_Achr6P04360_001 Banana cytosol 41.67 44.37
CDY67024 Canola cytosol 45.83 44.27
CDY28094 Canola cytosol 45.51 44.24
CDX96674 Canola cytosol 45.83 44.0
CDY41024 Canola peroxisome 45.51 43.96
TraesCS5D01G248500.1 Wheat cytosol 44.55 43.85
CDY28098 Canola cytosol 45.19 43.79
CDY51033 Canola cytosol 44.87 43.75
Bra029912.1-P Field mustard cytosol 45.19 43.65
TraesCS7D01G173500.1 Wheat cytosol 45.19 43.65
Zm00001d025549_P001 Maize cytosol 44.87 43.48
Bra016519.1-P Field mustard cytosol 45.51 43.43
TraesCS7A01G172600.1 Wheat cytosol 45.51 43.43
PGSC0003DMT400066383 Potato cytosol 42.31 43.42
PGSC0003DMT400039929 Potato cytosol 44.55 43.3
TraesCS2D01G498000.1 Wheat cytosol 44.55 43.3
TraesCS3D01G124000.1 Wheat cytosol 43.27 43.13
Zm00001d037288_P001 Maize cytosol, extracellular 42.95 43.09
Bra018809.1-P Field mustard cytosol 43.59 43.04
TraesCS7D01G173400.1 Wheat cytosol 44.55 42.9
TraesCS3B01G141200.1 Wheat cytosol 43.27 42.86
Zm00001d020737_P001 Maize extracellular 43.27 42.86
Zm00001d005910_P001 Maize cytosol 44.87 42.81
Os09t0461700-01 Rice cytosol 43.59 42.63
TraesCS2D01G315300.1 Wheat cytosol 43.91 42.55
EER99019 Sorghum cytosol 44.55 42.51
Zm00001d050493_P001 Maize cytosol, extracellular 44.55 42.51
Zm00001d031805_P001 Maize cytosol 36.86 42.44
HORVU2Hr1G110800.1 Barley cytosol 43.91 42.41
TraesCS5B01G241000.1 Wheat cytosol 43.91 42.28
KRH71160 Soybean nucleus 53.21 42.24
AT1G49640.1 Thale cress cytosol 42.63 42.22
EER96865 Sorghum cytosol 44.23 42.2
EER88069 Sorghum cytosol 44.87 42.04
Bra025714.1-P Field mustard cytosol 32.05 42.02
TraesCS5A01G243000.1 Wheat cytosol 43.59 41.98
Os06t0214800-01 Rice cytosol 44.23 41.95
Zm00001d020732_P001 Maize plastid 41.67 41.94
TraesCS5A01G437300.1 Wheat cytosol 44.55 41.87
TraesCS5D01G444200.1 Wheat cytosol 44.55 41.87
KXG25323 Sorghum cytosol 44.23 41.82
Zm00001d020744_P001 Maize cytosol 39.42 41.69
TraesCS5B01G059800.1 Wheat cytosol 41.35 41.48
TraesCS5D01G068400.1 Wheat cytosol 41.35 41.48
TraesCS5A01G450100.1 Wheat cytosol 42.31 41.38
GSMUA_Achr7P18960_001 Banana cytosol 42.95 41.36
HORVU5Hr1G069110.1 Barley cytosol 42.95 41.36
HORVU5Hr1G069140.1 Barley cytosol 42.95 41.36
TraesCS5A01G242600.1 Wheat cytosol 42.95 41.36
TraesCS5D01G249600.1 Wheat cytosol 42.95 41.36
EER88163 Sorghum cytosol 41.99 41.32
TraesCS5B01G439900.2 Wheat cytosol 44.23 41.32
Zm00001d016895_P001 Maize cytosol 44.23 41.32
Os08t0475400-02 Rice cytosol, plasma membrane 43.27 41.28
Zm00001d020707_P001 Maize cytosol, extracellular 37.82 41.26
Zm00001d044921_P001 Maize cytosol, extracellular 43.59 41.21
TraesCS2B01G526100.1 Wheat cytosol 42.63 41.18
TraesCS4B01G135300.1 Wheat cytosol 42.31 41.12
Os09t0462200-01 Rice cytosol, extracellular 44.23 41.07
PGSC0003DMT400018674 Potato cytosol 42.31 40.99
KXG26418 Sorghum cytosol 43.59 40.96
GSMUA_Achr9P24240_001 Banana cytosol 42.63 40.92
GSMUA_Achr7P12950_001 Banana cytosol 42.31 40.87
Zm00001d020738_P001 Maize plastid 43.59 40.84
Os09t0461900-01 Rice cytosol, plasma membrane 41.99 40.81
TraesCS6B01G046900.1 Wheat mitochondrion 29.81 40.79
PGSC0003DMT400081449 Potato cytosol 25.32 40.72
HORVU6Hr1G005900.1 Barley cytosol 41.99 40.68
Os06t0214300-01 Rice plasma membrane, plastid 41.99 40.68
TraesCS2A01G497900.1 Wheat cytosol 41.99 40.68
HORVU5Hr1G017510.2 Barley cytosol 41.67 40.62
PGSC0003DMT400077411 Potato cytosol 42.63 40.55
TraesCS2D01G389600.1 Wheat cytosol 41.99 40.43
KXG21709 Sorghum cytosol, mitochondrion, plastid 36.22 40.36
EES16153 Sorghum cytosol 43.27 40.3
Os09t0460500-00 Rice cytosol 40.38 40.26
TraesCS5B01G240000.1 Wheat cytosol 41.67 40.25
TraesCS5A01G242500.1 Wheat plastid 43.59 40.0
TraesCS6D01G038600.1 Wheat cytosol 41.67 40.0
TraesCS7D01G173800.1 Wheat golgi 40.38 40.0
CDY02986 Canola cytosol 45.19 39.94
TraesCS6A01G033400.1 Wheat cytosol 41.67 39.88
HORVU2Hr1G093140.1 Barley cytosol 41.35 39.81
Zm00001d050837_P001 Maize cytosol 42.31 39.76
TraesCS4B01G331200.1 Wheat cytosol 41.03 39.75
EER89413 Sorghum cytosol 43.27 39.71
TraesCS6B01G047900.1 Wheat cytosol 41.35 39.69
PGSC0003DMT400018589 Potato cytosol 32.05 39.53
TraesCS5D01G249700.2 Wheat cytosol 44.87 39.44
Os09t0460700-01 Rice cytosol 39.42 39.42
Os09t0455500-01 Rice cytosol 40.38 39.38
OQU85176 Sorghum plastid 42.95 39.3
TraesCS5D01G249100.1 Wheat cytosol 39.1 39.23
KXG19591 Sorghum cytosol 40.71 39.2
PGSC0003DMT400081451 Potato cytosol 41.03 39.14
Zm00001d037180_P001 Maize cytosol, extracellular 40.71 39.08
Os02t0567800-01 Rice cytosol 40.06 39.06
TraesCS5A01G502600.1 Wheat cytosol 40.06 39.06
Os09t0460400-01 Rice cytosol 39.42 39.05
AT1G49650.1 Thale cress mitochondrion 46.79 39.04
HORVU0Hr1G019700.1 Barley cytosol, mitochondrion 30.13 39.0
OQU89622 Sorghum cytosol 39.74 38.99
TraesCS7A01G172500.1 Wheat peroxisome 40.38 38.89
TraesCS4D01G328100.1 Wheat cytosol 40.06 38.82
Zm00001d020740_P001 Maize cytosol 41.03 38.79
TraesCS7B01G077300.1 Wheat peroxisome 40.06 38.58
OQU81663 Sorghum cytosol 43.91 38.48
TraesCS2B01G409800.1 Wheat cytosol 41.03 38.44
PGSC0003DMT400081446 Potato cytosol 40.38 38.41
TraesCS5A01G065200.1 Wheat cytosol, plastid 42.95 38.18
TraesCS2A01G317400.1 Wheat mitochondrion, plastid 43.27 38.14
HORVU0Hr1G005140.1 Barley extracellular 38.46 37.97
TraesCS5A01G242000.1 Wheat cytosol 38.14 37.9
TraesCS5D01G076000.1 Wheat cytosol 42.31 37.61
Bra018808.1-P Field mustard plastid 45.83 37.53
PGSC0003DMT400081450 Potato cytoskeleton, cytosol, nucleus 39.42 37.5
TraesCS5B01G240200.1 Wheat endoplasmic reticulum, vacuole 41.35 37.5
CDY32845 Canola mitochondrion 43.91 37.43
TraesCS5B01G072000.1 Wheat cytosol, mitochondrion 41.99 37.43
TraesCS5D01G248700.1 Wheat endoplasmic reticulum, vacuole 41.35 37.39
KXG35782 Sorghum cytosol 40.38 37.39
CDY16521 Canola mitochondrion 45.51 37.37
CDY28095 Canola plastid 45.51 37.37
CDY51034 Canola plastid 45.51 37.37
Os09t0455900-01 Rice cytosol, plasma membrane 38.14 37.3
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 41.35 37.28
TraesCS5D01G249000.1 Wheat cytosol 37.5 37.26
Bra014213.1-P Field mustard mitochondrion 45.19 37.11
TraesCS2B01G053400.1 Wheat cytosol 41.03 37.1
TraesCS2D01G389500.1 Wheat cytosol 35.9 37.09
HORVU5Hr1G068140.1 Barley cytosol 38.46 37.04
Zm00001d020736_P001 Maize endoplasmic reticulum, vacuole 41.03 36.99
KXG25394 Sorghum cytosol 39.1 36.97
Os06t0214850-00 Rice plasma membrane 41.67 36.93
TraesCS5A01G242300.1 Wheat extracellular, golgi 41.03 36.89
TraesCS5B01G235400.1 Wheat cytosol 38.14 36.73
TraesCS2B01G335600.1 Wheat plastid 43.91 36.53
Zm00001d020742_P001 Maize cytosol 33.65 36.46
KXG35760 Sorghum cytosol 37.82 36.42
TraesCS4A01G437700.1 Wheat cytosol 29.17 36.26
TraesCS7D01G173300.1 Wheat extracellular 41.35 36.13
TraesCS5B01G240500.1 Wheat cytosol 36.54 35.96
Os09t0461500-01 Rice golgi, mitochondrion 40.06 35.92
KXG35780 Sorghum extracellular, vacuole 40.71 35.88
TraesCS5D01G244200.1 Wheat cytosol 37.18 35.8
TraesCS4D01G130000.1 Wheat extracellular, vacuole 42.63 35.75
Zm00001d005909_P001 Maize plasma membrane 41.35 35.73
Zm00001d031804_P001 Maize cytosol 37.5 35.67
HORVU3Hr1G022640.1 Barley mitochondrion 41.67 35.62
Zm00001d005905_P001 Maize endoplasmic reticulum, golgi 40.06 35.51
TraesCS5D01G248900.1 Wheat cytosol 38.14 35.42
Zm00001d020741_P001 Maize golgi, mitochondrion, vacuole 42.95 35.36
OQU80639 Sorghum cytosol 37.82 35.33
TraesCS5A01G242100.1 Wheat cytosol 38.14 35.31
KXG35761 Sorghum cytosol 36.86 35.28
KXG35783 Sorghum extracellular, vacuole 41.03 35.26
PGSC0003DMT400094975 Potato cytosol, extracellular, plastid 30.77 35.16
Os09t0462100-01 Rice plasma membrane 42.63 35.0
TraesCS5B01G412100.1 Wheat endoplasmic reticulum 37.5 34.93
KXG35785 Sorghum extracellular, golgi, vacuole 41.99 34.75
TraesCS5D01G417100.1 Wheat endoplasmic reticulum 37.5 34.72
Os08t0474866-00 Rice extracellular 41.03 34.59
HORVU5Hr1G069090.1 Barley endoplasmic reticulum, golgi 41.35 34.58
Os08t0475100-01 Rice extracellular 36.54 34.23
HORVU5Hr1G093500.4 Barley plastid 40.71 34.23
HORVU0Hr1G013180.1 Barley endoplasmic reticulum, golgi, mitochondrion 41.35 34.22
TraesCS5D01G249500.1 Wheat endoplasmic reticulum, golgi 41.35 34.04
TraesCS5B01G240400.1 Wheat mitochondrion 36.86 34.02
EES15127 Sorghum extracellular 40.71 33.87
TraesCS5B01G240700.1 Wheat endoplasmic reticulum, golgi 40.71 33.78
Zm00001d050479_P001 Maize extracellular, plasma membrane, vacuole 41.03 33.77
OQU89623 Sorghum mitochondrion 41.35 33.77
TraesCS2D01G360900.1 Wheat extracellular 42.63 33.76
TraesCS5B01G240800.1 Wheat extracellular, golgi 39.74 33.7
TraesCS2B01G381300.1 Wheat vacuole 42.31 33.59
TraesCS5A01G242900.1 Wheat extracellular, golgi 41.03 33.51
TraesCS5B01G239300.1 Wheat plastid 40.71 33.42
TraesCS5A01G242800.1 Wheat extracellular, plasma membrane 39.42 33.24
Zm00001d031801_P001 Maize endoplasmic reticulum 37.82 33.24
HORVU5Hr1G068800.1 Barley plastid 40.38 33.16
TraesCS7D01G046800.1 Wheat cytosol 38.78 32.97
OQU80637 Sorghum plasma membrane 41.67 32.83
TraesCS5D01G249400.1 Wheat endoplasmic reticulum, plasma membrane 39.1 32.62
HORVU0Hr1G013170.1 Barley cytosol 34.29 32.42
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 36.86 32.39
TraesCS4A01G183300.2 Wheat extracellular, golgi 42.95 32.21
TraesCS5A01G241200.1 Wheat plastid 39.74 32.21
TraesCS5D01G247700.1 Wheat plastid 39.74 32.21
HORVU2Hr1G002620.1 Barley cytosol 41.99 31.95
TraesCS2B01G006100.1 Wheat cytosol 41.99 31.87
TraesCS2B01G006500.1 Wheat cytosol 41.99 31.87
TraesCS2D01G015900.1 Wheat cytosol 41.99 31.87
TraesCSU01G240900.1 Wheat cytosol 41.99 31.87
Os09t0460300-01 Rice plastid 39.42 31.78
HORVU5Hr1G098770.1 Barley plasma membrane 36.54 31.49
TraesCS4A01G436500.1 Wheat cytosol 38.78 31.43
TraesCSU01G158400.1 Wheat cytosol 39.1 30.81
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 25.64 30.77
TraesCS4A01G436300.1 Wheat cytosol 38.46 30.69
TraesCS4A01G438000.1 Wheat cytosol 19.87 30.24
HORVU7Hr1G009170.1 Barley cytosol 39.74 29.38
TraesCS4A01G437800.1 Wheat cytosol 39.1 29.19
TraesCS7A01G093800.1 Wheat cytosol, plastid 40.38 29.17
TraesCS4A01G393200.1 Wheat cytosol 40.38 29.1
TraesCS7D01G046600.1 Wheat cytosol 39.74 29.04
TraesCS4A01G436100.1 Wheat cytosol 39.42 28.94
TraesCS7D01G089100.1 Wheat cytosol 39.74 28.64
Os08t0475000-00 Rice cytosol 31.41 28.57
TraesCS5D01G248100.1 Wheat plastid 34.29 28.38
TraesCS5A01G241700.1 Wheat plastid 33.97 28.19
HORVU0Hr1G004410.1 Barley cytosol 39.42 28.15
HORVU0Hr1G013200.3 Barley plastid 33.01 27.54
TraesCS7D01G046900.1 Wheat mitochondrion 39.74 27.49
EER97903 Sorghum cytosol 39.74 27.37
TraesCS5A01G407200.1 Wheat plastid 37.18 27.23
OQU76051 Sorghum golgi, plasma membrane, vacuole 42.31 27.22
TraesCS2B01G007100.1 Wheat cytosol 38.46 26.85
TraesCS2A01G363400.1 Wheat endoplasmic reticulum, extracellular, vacuole 34.94 26.78
TraesCS2A01G021800.1 Wheat cytosol 38.14 26.62
TraesCS1B01G060800.1 Wheat cytosol 37.82 26.58
TraesCSU01G143300.1 Wheat cytosol 37.5 26.35
TraesCS2D01G051400.1 Wheat cytosol 38.14 26.33
TraesCS5B01G239700.1 Wheat plastid 34.29 26.16
HORVU2Hr1G067270.2 Barley cytosol 34.94 25.89
HORVU5Hr1G068960.1 Barley cytosol 34.94 25.89
TraesCS2D01G022400.1 Wheat cytosol 37.82 25.88
TraesCSU01G008500.1 Wheat cytosol 37.5 25.66
Os07t0526600-01 Rice extracellular 37.82 25.65
Os07t0501400-00 Rice plastid 36.54 25.45
HORVU2Hr1G003300.1 Barley cytosol 38.46 25.16
Os09t0435700-00 Rice mitochondrion 32.05 23.47
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.42 19.97
TraesCS3D01G500400.1 Wheat cytosol 4.49 8.75
Protein Annotations
EnsemblPlants:PGSC0003DMT400091080EnsemblPlantsGene:PGSC0003DMG400040651EntrezGene:102579519Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058
PANTHER:PTHR23024PANTHER:PTHR23024:SF251PFAM:PF07859PGSC:PGSC0003DMG400040651RefSeq:XP_006346461.1SEG:seg
SUPFAM:SSF53474UniParc:UPI00029576BFUniProt:M1DLU7MapMan:35.1::
Description
Gibberellin receptor GID1 [Source:PGSC_GENE;Acc:PGSC0003DMG400040651]
Coordinates
chr1:+:84936965..84937903
Molecular Weight (calculated)
35020.2 Da
IEP (calculated)
5.000
GRAVY (calculated)
-0.096
Length
312 amino acids
Sequence
(BLAST)
001: MAEIIHDLFP LIRVYKDGRI ERLMGEGFVP PESDPETGVQ IKDIEIDPQI NLSARLYLPK NIDPIQKIPL FVYFHGGAFV IESATSPTYH KHLSMVAAEA
101: KVVIVSVNYR LAPEYPLPIA YEDSWIALKW IASHANGDGY EPWLKDHANF NRVYFGGDSA GGNIAHHMAI RVGLEKLEGV KLDGIFLACP YFWGKDLIDG
201: EGENLFVKDC IDKLWLFANP NGFGLDDPLI NPEKDPKLCS LGCEKVLVYV AGKDPLRFRG LYYKEALEKS GWPGTVEVVE VKDEEHVFHL FAPEAENGMA
301: MLKKLVSFLN QS
Best Arabidopsis Sequence Match ( AT3G48690.1 )
(BLAST)
001: MDSEIAVDCS PLLKIYKSGR IERLMGEATV PPSSEPQNGV VSKDVVYSAD NNLSVRIYLP EKAAAETDSK LPLLVYFHGG GFIIETAFSP TYHTFLTTSV
101: SASNCVAVSV DYRRAPEHPI SVPFDDSWTA LKWVFTHITG SGQEDWLNKH ADFSRVFLSG DSAGANIVHH MAMRAAKEKL SPGLNDTGIS GIILLHPYFW
201: SKTPIDEKDT KDETLRMKIE AFWMMASPNS KDGTDDPLLN VVQSESVDLS GLGCGKVLVM VAEKDALVRQ GWGYAAKLEK SGWKGEVEVV ESEGEDHVFH
301: LLKPECDNAI EVMHKFSGFI KGGN
Arabidopsis Description
CXE12Probable carboxylesterase 12 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMN0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.