Factsheet for TraesCS6D01G038600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G033400.1	Wheat	cytosol	92.62	92.33
TraesCS6B01G046900.1	Wheat	mitochondrion	64.0	91.23
TraesCS6B01G047900.1	Wheat	cytosol	91.08	91.08
HORVU6Hr1G005900.1	Barley	cytosol	84.31	85.09
TraesCS5D01G248500.1	Wheat	cytosol	70.77	72.56
Os09t0461700-01	Rice	cytosol	68.0	69.28
KXG35781	Sorghum	cytosol	52.31	54.31
Zm00001d020737_P001	Maize	extracellular	52.0	53.65
TraesCS5D01G249100.1	Wheat	cytosol	50.15	52.41
EER88163	Sorghum	cytosol	50.46	51.73
Zm00001d037288_P001	Maize	cytosol, extracellular	49.23	51.45
Zm00001d020738_P001	Maize	plastid	52.62	51.35
GSMUA_Achr6P04360_001	Banana	cytosol	46.15	51.19
TraesCS5D01G249000.1	Wheat	cytosol	48.31	50.0
TraesCS5D01G244200.1	Wheat	cytosol	48.0	48.15
GSMUA_Achr6P04230_001	Banana	cytosol	34.46	47.86
GSMUA_Achr3P06860_001	Banana	cytosol	35.38	46.94
TraesCS4D01G328100.1	Wheat	cytosol	45.85	46.27
TraesCS2D01G315300.1	Wheat	cytosol	45.23	45.65
TraesCS2D01G389600.1	Wheat	cytosol	44.92	45.06
GSMUA_Achr7P12950_001	Banana	cytosol	44.31	44.58
TraesCS5D01G068400.1	Wheat	cytosol	42.46	44.37
TraesCS3D01G124000.1	Wheat	cytosol	42.15	43.77
TraesCS2D01G389500.1	Wheat	cytosol	40.62	43.71
TraesCS5D01G249600.1	Wheat	cytosol	43.38	43.52
TraesCS2D01G498000.1	Wheat	cytosol	42.77	43.3
VIT_03s0063g00810.t01	Wine grape	cytosol	41.54	43.13
VIT_03s0063g00730.t01	Wine grape	cytosol	42.46	43.12
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	39.69	43.0
VIT_03s0063g00800.t01	Wine grape	cytosol	39.69	43.0
TraesCS7D01G173400.1	Wheat	cytosol	42.77	42.9
TraesCS7D01G173800.1	Wheat	golgi	41.54	42.86
VIT_03s0063g00820.t01	Wine grape	cytosol	39.69	42.86
TraesCS7D01G173500.1	Wheat	cytosol	42.46	42.72
KRH50256	Soybean	cytosol	41.54	42.45
PGSC0003DMT400066384	Potato	cytosol	26.77	42.44
VIT_03s0063g00750.t01	Wine grape	cytosol	42.15	42.41
VIT_03s0063g00700.t01	Wine grape	cytosol	41.85	42.11
VIT_03s0063g00720.t01	Wine grape	cytosol	41.85	42.11
TraesCS7D01G173300.1	Wheat	extracellular	46.15	42.02
Solyc01g108560.2.1	Tomato	cytosol, plastid	38.77	41.86
KRH71164	Soybean	cytosol	39.08	41.78
PGSC0003DMT400091080	Potato	cytosol	40.0	41.67
TraesCS5D01G076000.1	Wheat	cytosol	44.92	41.6
VIT_03s0063g00790.t01	Wine grape	cytosol	38.46	41.53
Solyc01g108540.2.1	Tomato	cytosol	39.38	41.42
PGSC0003DMT400066385	Potato	cytosol	39.08	41.37
Solyc01g108580.2.1	Tomato	cytosol	39.69	41.35
KRH50255	Soybean	cytosol	38.46	41.12
TraesCS5D01G248900.1	Wheat	cytosol	42.46	41.07
TraesCS5D01G444200.1	Wheat	cytosol	41.85	40.96
Solyc01g108530.2.1	Tomato	cytosol	38.46	40.72
PGSC0003DMT400066386	Potato	cytosol	39.08	40.71
Solyc10g050880.1.1	Tomato	cytosol	39.08	40.71
VIT_03s0063g00740.t01	Wine grape	cytosol	40.31	40.68
Solyc01g108570.2.1	Tomato	cytosol, extracellular	38.77	40.65
PGSC0003DMT400066392	Potato	cytosol	39.08	40.58
KRH71161	Soybean	cytosol	33.85	40.29
KRH71162	Soybean	cytosol, nucleus	41.23	40.24
PGSC0003DMT400066389	Potato	cytosol	35.69	39.73
TraesCS5D01G248100.1	Wheat	plastid	45.85	39.52
VIT_03s0063g00830.t01	Wine grape	cytosol	36.62	39.4
TraesCS5D01G247700.1	Wheat	plastid	46.46	39.22
AT3G48690.1	Thale cress	cytosol	38.46	38.58
TraesCS5D01G417100.1	Wheat	endoplasmic reticulum	40.0	38.58
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	44.92	38.52
TraesCS5D01G248700.1	Wheat	endoplasmic reticulum, vacuole	40.62	38.26
Bra025117.1-P	Field mustard	cytosol	35.38	37.83
TraesCS5D01G249400.1	Wheat	endoplasmic reticulum, plasma membrane	43.08	37.43
KRH71163	Soybean	cytosol	34.77	37.42
Bra040667.1-P	Field mustard	cytosol	36.62	37.3
CDY28098	Canola	cytosol	36.92	37.27
AT2G03550.1	Thale cress	cytosol	35.69	37.18
CDX77920	Canola	cytosol	35.69	37.18
TraesCS4D01G130000.1	Wheat	extracellular, vacuole	42.46	37.1
CDY29339	Canola	cytosol	36.31	36.99
PGSC0003DMT400088862	Potato	cytosol	39.08	36.92
CDY51033	Canola	cytosol	36.31	36.88
Bra019558.1-P	Field mustard	cytosol	36.62	36.84
CDY37916	Canola	cytosol	36.62	36.84
AT1G19190.1	Thale cress	cytosol	36.0	36.79
AT3G48700.1	Thale cress	cytosol	37.23	36.78
Bra018809.1-P	Field mustard	cytosol	35.69	36.71
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	35.38	36.51
CDY28094	Canola	cytosol	36.0	36.45
CDY20870	Canola	cytosol	35.69	36.36
TraesCS5D01G249700.2	Wheat	cytosol	39.69	36.34
AT1G49660.1	Thale cress	cytosol	35.38	36.05
KRH50257	Soybean	cytosol	36.0	36.0
CDX83045	Canola	cytosol	35.69	35.8
TraesCS2D01G360900.1	Wheat	extracellular	43.38	35.79
Bra025714.1-P	Field mustard	cytosol	26.15	35.71
CDX68486	Canola	cytosol	35.38	35.6
CDY41024	Canola	peroxisome	35.38	35.6
Bra029913.1-P	Field mustard	cytosol	35.69	35.58
Bra029912.1-P	Field mustard	cytosol	35.08	35.29
CDY67024	Canola	cytosol	35.08	35.29
AT1G49640.1	Thale cress	cytosol	34.15	35.24
Bra018807.1-P	Field mustard	cytosol	35.08	34.97
PGSC0003DMT400066383	Potato	cytosol	32.62	34.87
CDY51035	Canola	cytosol	34.77	34.66
CDX96674	Canola	cytosol	34.46	34.46
Bra016519.1-P	Field mustard	cytosol	33.85	33.64
KRH71160	Soybean	nucleus	40.31	33.33
TraesCS7D01G046800.1	Wheat	cytosol	36.92	32.7
VIT_03s0063g00770.t01	Wine grape	plastid	41.85	32.69
CDY02986	Canola	cytosol	35.38	32.58
CDY16521	Canola	mitochondrion	37.23	31.84
Bra014213.1-P	Field mustard	mitochondrion	36.92	31.58
Bra018808.1-P	Field mustard	plastid	36.92	31.5
CDY32845	Canola	mitochondrion	35.38	31.42
CDY28095	Canola	plastid	36.31	31.05
CDY51034	Canola	plastid	36.31	31.05
AT1G49650.1	Thale cress	mitochondrion	35.38	30.75
TraesCS2D01G015900.1	Wheat	cytosol	37.85	29.93
TraesCS2D01G051400.1	Wheat	cytosol	39.38	28.32
TraesCS7D01G089100.1	Wheat	cytosol	36.92	27.71
TraesCS2D01G022400.1	Wheat	cytosol	38.15	27.19
TraesCS7D01G046600.1	Wheat	cytosol	35.69	27.17
TraesCS7D01G046900.1	Wheat	mitochondrion	37.54	27.05
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.85	22.08
TraesCS3D01G500400.1	Wheat	cytosol	4.0	8.12

Protein Annotations

EnsemblPlants:TraesCS6D01G038600.1	EnsemblPlantsGene:TraesCS6D01G038600	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF185	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:16143354..16144331

Molecular Weight (calculated)

34838.2 Da

IEP (calculated)

4.868

GRAVY (calculated)

-0.133

Length

325 amino acids

Sequence
(BLAST)

001: MRAMDPAPAA SKMRFDSPAF RVHEDGRVER FFGTDTTEPG FDAATGVTSK DVVLDGATGV FSRLYLPALP DGPDRGRRLP ILVYFHGGGL VLGSAASQMY
101: HGYLNSVVSR AGVLAVSVDY RLAPEHPIPA AYEDSWMALS WAASRADPWL SEHGDAGRIF LAGDSGGANI VHNMAIMAGS ADDDNGLPVG AVVERVILLH
201: PMFGGKEPVD GEAADTRYHM EKLWALICPD GDGLGVDDPR LNPMAPAAPR LRALAGRRLL VCSAERDFAR ARAAAYYQAV KGSGWPGTAE WVESPGEEHG
301: FFLLQPERDE SSALMDRVVA FLSGE

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.