Factsheet for TraesCS6B01G047900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G046900.1	Wheat	mitochondrion	65.23	92.98
TraesCS6A01G033400.1	Wheat	cytosol	91.38	91.1
TraesCS6D01G038600.1	Wheat	cytosol	91.08	91.08
HORVU6Hr1G005900.1	Barley	cytosol	83.08	83.85
Os09t0461700-01	Rice	cytosol	66.77	68.03
KXG35781	Sorghum	cytosol	51.38	53.35
Zm00001d020737_P001	Maize	extracellular	51.69	53.33
Zm00001d037288_P001	Maize	cytosol, extracellular	49.85	52.09
EER88163	Sorghum	cytosol	50.46	51.73
GSMUA_Achr6P04360_001	Banana	cytosol	46.46	51.54
Zm00001d020738_P001	Maize	plastid	51.69	50.45
TraesCS5B01G240500.1	Wheat	cytosol	47.69	48.9
TraesCS5B01G235400.1	Wheat	cytosol	48.31	48.46
TraesCS4B01G331200.1	Wheat	cytosol	48.0	48.45
TraesCS7B01G077300.1	Wheat	peroxisome	46.77	46.91
GSMUA_Achr3P06860_001	Banana	cytosol	34.77	46.12
GSMUA_Achr6P04230_001	Banana	cytosol	32.92	45.73
TraesCS3B01G141200.1	Wheat	cytosol	44.0	45.4
TraesCS5B01G241000.1	Wheat	cytosol	44.0	44.14
TraesCS5B01G059800.1	Wheat	cytosol	42.15	44.05
TraesCS5B01G240000.1	Wheat	cytosol	43.69	43.96
GSMUA_Achr7P12950_001	Banana	cytosol	43.38	43.65
VIT_03s0063g00730.t01	Wine grape	cytosol	42.77	43.44
TraesCS2B01G526100.1	Wheat	cytosol	43.08	43.34
PGSC0003DMT400066384	Potato	cytosol	27.08	42.93
VIT_03s0063g00820.t01	Wine grape	cytosol	39.69	42.86
TraesCS4B01G135300.1	Wheat	cytosol	42.15	42.68
TraesCS2B01G409800.1	Wheat	cytosol	43.69	42.64
TraesCS7B01G077500.1	Wheat	golgi	42.15	42.41
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	39.08	42.33
VIT_03s0063g00750.t01	Wine grape	cytosol	41.85	42.11
VIT_03s0063g00810.t01	Wine grape	cytosol	40.31	41.85
KRH50256	Soybean	cytosol	40.92	41.82
PGSC0003DMT400066385	Potato	cytosol	39.38	41.69
VIT_03s0063g00800.t01	Wine grape	cytosol	38.46	41.67
Solyc01g108560.2.1	Tomato	cytosol, plastid	38.46	41.53
KRH71164	Soybean	cytosol	38.77	41.45
PGSC0003DMT400091080	Potato	cytosol	39.69	41.35
TraesCS5B01G439900.2	Wheat	cytosol	42.46	41.32
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	44.31	41.14
Solyc01g108530.2.1	Tomato	cytosol	38.77	41.04
Solyc01g108580.2.1	Tomato	cytosol	39.38	41.03
Solyc01g108570.2.1	Tomato	cytosol, extracellular	39.08	40.97
PGSC0003DMT400066392	Potato	cytosol	39.38	40.89
VIT_03s0063g00700.t01	Wine grape	cytosol	40.62	40.87
VIT_03s0063g00720.t01	Wine grape	cytosol	40.62	40.87
VIT_03s0063g00790.t01	Wine grape	cytosol	37.85	40.86
KRH50255	Soybean	cytosol	38.15	40.79
Solyc01g108540.2.1	Tomato	cytosol	38.77	40.78
VIT_03s0063g00740.t01	Wine grape	cytosol	40.31	40.68
KRH71162	Soybean	cytosol, nucleus	41.54	40.54
PGSC0003DMT400066386	Potato	cytosol	38.77	40.38
Solyc10g050880.1.1	Tomato	cytosol	38.77	40.38
TraesCS5B01G240400.1	Wheat	mitochondrion	41.54	39.94
KRH71161	Soybean	cytosol	33.54	39.93
PGSC0003DMT400066389	Potato	cytosol	35.69	39.73
TraesCS5B01G239300.1	Wheat	plastid	46.15	39.47
VIT_03s0063g00830.t01	Wine grape	cytosol	36.62	39.4
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	40.31	39.1
AT3G48690.1	Thale cress	cytosol	38.46	38.58
Bra025117.1-P	Field mustard	cytosol	36.0	38.49
CDX77920	Canola	cytosol	36.92	38.46
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	40.62	38.37
TraesCS2B01G335600.1	Wheat	plastid	44.0	38.13
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	44.0	38.03
Bra019558.1-P	Field mustard	cytosol	37.54	37.77
CDY37916	Canola	cytosol	37.54	37.77
AT3G48700.1	Thale cress	cytosol	38.15	37.69
KRH71163	Soybean	cytosol	34.77	37.42
TraesCS5B01G240800.1	Wheat	extracellular, golgi	42.15	37.23
PGSC0003DMT400088862	Potato	cytosol	39.38	37.21
TraesCS5B01G239700.1	Wheat	plastid	46.46	36.92
AT2G03550.1	Thale cress	cytosol	35.38	36.86
CDX68486	Canola	cytosol	36.62	36.84
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	35.69	36.83
CDX83045	Canola	cytosol	36.62	36.73
Bra029913.1-P	Field mustard	cytosol	36.62	36.5
AT1G19190.1	Thale cress	cytosol	35.69	36.48
Bra040667.1-P	Field mustard	cytosol	35.38	36.05
CDY29339	Canola	cytosol	35.38	36.05
CDY28098	Canola	cytosol	35.69	36.02
Bra029912.1-P	Field mustard	cytosol	35.69	35.91
Bra025714.1-P	Field mustard	cytosol	26.15	35.71
CDY51033	Canola	cytosol	35.08	35.62
TraesCS2B01G381300.1	Wheat	vacuole	43.08	35.62
CDY67024	Canola	cytosol	35.38	35.6
CDY20870	Canola	cytosol	34.77	35.42
CDY28094	Canola	cytosol	34.77	35.2
Bra018809.1-P	Field mustard	cytosol	34.15	35.13
AT1G49660.1	Thale cress	cytosol	34.46	35.11
TraesCS2B01G053400.1	Wheat	cytosol	37.23	35.07
CDY41024	Canola	peroxisome	34.77	34.98
AT1G49640.1	Thale cress	cytosol	33.85	34.92
CDX96674	Canola	cytosol	34.77	34.77
KRH50257	Soybean	cytosol	34.77	34.77
Bra018807.1-P	Field mustard	cytosol	34.77	34.66
CDY51035	Canola	cytosol	34.46	34.36
PGSC0003DMT400066383	Potato	cytosol	32.0	34.21
Bra016519.1-P	Field mustard	cytosol	33.54	33.33
CDY02986	Canola	cytosol	35.69	32.86
KRH71160	Soybean	nucleus	39.08	32.32
VIT_03s0063g00770.t01	Wine grape	plastid	40.0	31.25
CDY16521	Canola	mitochondrion	36.31	31.05
Bra014213.1-P	Field mustard	mitochondrion	36.0	30.79
Bra018808.1-P	Field mustard	plastid	36.0	30.71
CDY32845	Canola	mitochondrion	34.46	30.6
CDY51034	Canola	plastid	35.38	30.26
AT1G49650.1	Thale cress	mitochondrion	34.46	29.95
CDY28095	Canola	plastid	34.77	29.74
TraesCS2B01G006100.1	Wheat	cytosol	37.23	29.44
TraesCS2B01G006500.1	Wheat	cytosol	37.23	29.44
TraesCS1B01G060800.1	Wheat	cytosol	38.77	28.38
TraesCS2B01G007100.1	Wheat	cytosol	38.15	27.74
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.54	21.92

Protein Annotations

EnsemblPlants:TraesCS6B01G047900.1	EnsemblPlantsGene:TraesCS6B01G047900	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF185	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:+:28063414..28064391

Molecular Weight (calculated)

34423.7 Da

IEP (calculated)

5.183

GRAVY (calculated)

-0.099

Length

325 amino acids

Sequence
(BLAST)

001: MDPAPAPAAS KMRFDSPAFR VHEDGRVERF FGTDTTHPGF DAATGVTSKD VVLDGATGVF ARVYLPALPD GPGRGTRLPI LVYFHGGGLV LGSAASQMYH
101: GYLNAVASRA GVLAVSVDYR LAPEHPIPAA YEDSWTALRW AASRADPWLS AHGDAGRIFL AGDSGGANIV HNMAIMAGTR STDQDGLPAG ALVEGAILLH
201: PMFGGKEPVD GEAADTRYHM EKLWALICPD GEGLGVDDPR LNPMAPGAPS LRALAGRRLL VCSAERDFAR ARAAAYYQAV KGSAWPGMAE WVESPGEEHG
301: FFLLQPERDE SSALLDRVAA FLSGE

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.