Factsheet for TraesCS7B01G077500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G172600.1	Wheat	cytosol	96.9	95.72
TraesCS7D01G173500.1	Wheat	cytosol	95.05	95.05
TraesCS7D01G173400.1	Wheat	cytosol	95.05	94.75
Os06t0214800-01	Rice	cytosol	76.78	75.38
Zm00001d044921_P001	Maize	cytosol, extracellular	75.85	74.24
EER88069	Sorghum	cytosol	75.85	73.57
GSMUA_Achr6P04230_001	Banana	cytosol	38.7	53.42
GSMUA_Achr6P04360_001	Banana	cytosol	47.99	52.9
GSMUA_Achr3P06860_001	Banana	cytosol	38.39	50.61
VIT_03s0063g00830.t01	Wine grape	cytosol	45.82	49.01
VIT_03s0063g00790.t01	Wine grape	cytosol	44.89	48.17
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	43.96	47.33
PGSC0003DMT400066384	Potato	cytosol	30.03	47.32
TraesCS5B01G059800.1	Wheat	cytosol	45.51	47.27
VIT_03s0063g00730.t01	Wine grape	cytosol	46.75	47.19
GSMUA_Achr7P12950_001	Banana	cytosol	46.75	46.75
TraesCS4B01G331200.1	Wheat	cytosol	46.44	46.58
PGSC0003DMT400091080	Potato	cytosol	44.89	46.47
VIT_03s0063g00740.t01	Wine grape	cytosol	46.13	46.27
TraesCS5B01G241000.1	Wheat	cytosol	46.13	45.99
Solyc01g108540.2.1	Tomato	cytosol	43.96	45.95
VIT_03s0063g00720.t01	Wine grape	cytosol	45.82	45.82
PGSC0003DMT400066392	Potato	cytosol	44.27	45.69
VIT_03s0063g00810.t01	Wine grape	cytosol	44.27	45.69
VIT_03s0063g00800.t01	Wine grape	cytosol	42.41	45.67
KRH50256	Soybean	cytosol	44.89	45.6
PGSC0003DMT400066386	Potato	cytosol	43.96	45.51
Solyc01g108580.2.1	Tomato	cytosol	43.96	45.51
VIT_03s0063g00700.t01	Wine grape	cytosol	45.51	45.51
TraesCS3B01G141200.1	Wheat	cytosol	44.27	45.4
VIT_03s0063g00750.t01	Wine grape	cytosol	45.2	45.2
VIT_03s0063g00820.t01	Wine grape	cytosol	42.11	45.18
Solyc01g108570.2.1	Tomato	cytosol, extracellular	43.34	45.16
Solyc01g108560.2.1	Tomato	cytosol, plastid	41.8	44.85
CDX83045	Canola	cytosol	44.58	44.44
Bra029913.1-P	Field mustard	cytosol	44.58	44.17
CDX77920	Canola	cytosol	42.41	43.91
TraesCS7B01G077300.1	Wheat	peroxisome	43.96	43.83
CDX68486	Canola	cytosol	43.65	43.65
CDY37916	Canola	cytosol	43.65	43.65
AT3G48690.1	Thale cress	cytosol	43.65	43.52
PGSC0003DMT400066389	Potato	cytosol	39.32	43.49
KRH50255	Soybean	cytosol	40.87	43.42
Bra019558.1-P	Field mustard	cytosol	43.34	43.34
Solyc10g050880.1.1	Tomato	cytosol	41.8	43.27
KRH71162	Soybean	cytosol, nucleus	43.96	42.64
TraesCS5B01G240500.1	Wheat	cytosol	41.8	42.59
TraesCS5B01G439900.2	Wheat	cytosol	43.96	42.52
KRH71164	Soybean	cytosol	39.94	42.43
TraesCS6B01G047900.1	Wheat	cytosol	42.41	42.15
TraesCS6B01G046900.1	Wheat	mitochondrion	29.72	42.11
KRH71163	Soybean	cytosol	39.32	42.05
KRH50257	Soybean	cytosol	42.11	41.85
CDY67024	Canola	cytosol	41.8	41.8
KRH71161	Soybean	cytosol	35.29	41.76
TraesCS5B01G240400.1	Wheat	mitochondrion	43.65	41.72
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	45.2	41.71
PGSC0003DMT400066385	Potato	cytosol	39.63	41.69
Solyc01g108530.2.1	Tomato	cytosol	39.32	41.37
AT3G48700.1	Thale cress	cytosol	42.11	41.34
PGSC0003DMT400088862	Potato	cytosol	43.96	41.28
Bra029912.1-P	Field mustard	cytosol	41.18	41.18
CDY28094	Canola	cytosol	40.87	41.12
AT2G03550.1	Thale cress	cytosol	39.63	41.03
CDY29339	Canola	cytosol	40.25	40.75
TraesCS2B01G526100.1	Wheat	cytosol	40.56	40.56
Bra040667.1-P	Field mustard	cytosol	39.94	40.44
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	43.03	40.41
Bra025117.1-P	Field mustard	cytosol	37.77	40.13
AT1G49660.1	Thale cress	cytosol	39.63	40.13
CDY20870	Canola	cytosol	39.63	40.13
Bra018807.1-P	Field mustard	cytosol	40.25	39.88
PGSC0003DMT400066383	Potato	cytosol	37.46	39.8
CDY28098	Canola	cytosol	39.63	39.75
AT1G49640.1	Thale cress	cytosol	38.7	39.68
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	46.13	39.63
CDY51035	Canola	cytosol	39.94	39.57
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	40.87	39.4
CDY51033	Canola	cytosol	39.01	39.38
TraesCS5B01G240000.1	Wheat	cytosol	39.32	39.32
TraesCS4B01G135300.1	Wheat	cytosol	39.01	39.25
TraesCS5B01G235400.1	Wheat	cytosol	39.32	39.2
TraesCS2B01G335600.1	Wheat	plastid	45.2	38.93
Bra025714.1-P	Field mustard	cytosol	28.48	38.66
CDY41024	Canola	peroxisome	38.39	38.39
Bra018809.1-P	Field mustard	cytosol	37.46	38.29
AT1G19190.1	Thale cress	cytosol	37.46	38.05
TraesCS2B01G409800.1	Wheat	cytosol	39.01	37.84
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	36.84	37.78
KRH71160	Soybean	nucleus	45.82	37.66
CDX96674	Canola	cytosol	37.46	37.23
TraesCS5B01G239300.1	Wheat	plastid	43.34	36.84
CDY16521	Canola	mitochondrion	43.03	36.58
Bra016519.1-P	Field mustard	cytosol	36.84	36.39
Bra014213.1-P	Field mustard	mitochondrion	42.72	36.32
CDY32845	Canola	mitochondrion	40.87	36.07
TraesCS2B01G381300.1	Wheat	vacuole	43.65	35.88
CDY02986	Canola	cytosol	38.7	35.41
TraesCS5B01G240800.1	Wheat	extracellular, golgi	39.63	34.78
TraesCS2B01G053400.1	Wheat	cytosol	36.84	34.49
AT1G49650.1	Thale cress	mitochondrion	39.63	34.22
VIT_03s0063g00770.t01	Wine grape	plastid	43.65	33.89
CDY28095	Canola	plastid	39.63	33.68
Bra018808.1-P	Field mustard	plastid	39.63	33.6
CDY51034	Canola	plastid	39.32	33.42
TraesCS5B01G239700.1	Wheat	plastid	39.94	31.54
TraesCS2B01G006100.1	Wheat	cytosol	39.94	31.39
TraesCS2B01G006500.1	Wheat	cytosol	39.94	31.39
TraesCS2B01G007100.1	Wheat	cytosol	40.87	29.53
TraesCS1B01G060800.1	Wheat	cytosol	40.56	29.5
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	43.34	22.73

Protein Annotations

EnsemblPlants:TraesCS7B01G077500.1	EnsemblPlantsGene:TraesCS7B01G077500	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF199	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr7B:+:87125815..87126786

Molecular Weight (calculated)

34408.9 Da

IEP (calculated)

5.594

GRAVY (calculated)

-0.001

Length

323 amino acids

Sequence
(BLAST)

001: MAATGGSDEE VHFDFFPLVR QYKSGRVERF FNFPPIPAGV DPATGVVSKD VVIDPANGLW ARVFLPPGAA GKLPVLIYFH GGAYVIGSAS DPMTHNYLNG
101: LVAAANVVAV ALEYRLAPEH PLPAAYDDSW EGLKWVASHA TAGAAGTEPW LVDHGDFSRV FLAGGSAGGT IAHVMAVRAG EQGALPGVGI KGIIVVHPYF
201: SGAAEIGKEA TTGKAEKAKA DAFWRFLYPG SPGLDDPLSN PFSEAAGGSA ARIAGERVLV CVAQKDGLRD RGVWYYESLK ASGYGGEVEL LESMDEDHVF
301: YCMKPRSEKA IELQERILSF LRK

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.