Factsheet for TraesCS5B01G240400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G287900.3
TraesCS3B01G322600.5
TraesCS3D01G287700.1
TraesCS6A01G302100.1
TraesCS6B01G331200.2
TraesCS6D01G281500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	TraesCS3A01G287900.3	AT4G10930.1	21798944
AT3G48690.1	TraesCS3B01G322600.5	AT4G10930.1	21798944
AT3G48690.1	TraesCS3D01G287700.1	AT4G10930.1	21798944
AT3G48690.1	TraesCS6A01G302100.1	AT5G10110.1	21798944
AT3G48690.1	TraesCS6B01G331200.2	AT5G10110.1	21798944
AT3G48690.1	TraesCS6D01G281500.1	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G248900.1	Wheat	cytosol	88.46	88.99
TraesCS5A01G242100.1	Wheat	cytosol	88.17	88.43
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	60.06	58.0
GSMUA_Achr6P04360_001	Banana	cytosol	42.9	49.49
GSMUA_Achr6P04230_001	Banana	cytosol	34.02	49.15
GSMUA_Achr3P06860_001	Banana	cytosol	35.21	48.57
GSMUA_Achr7P12950_001	Banana	cytosol	44.38	46.44
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	44.97	44.19
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	43.79	44.18
TraesCS7B01G077500.1	Wheat	golgi	41.72	43.65
TraesCS7B01G077300.1	Wheat	peroxisome	41.72	43.52
TraesCS5B01G240500.1	Wheat	cytosol	39.94	42.59
TraesCS2B01G409800.1	Wheat	cytosol	41.72	42.34
TraesCS5B01G241000.1	Wheat	cytosol	40.24	41.98
TraesCS4B01G135300.1	Wheat	cytosol	39.65	41.74
TraesCS2B01G381300.1	Wheat	vacuole	48.52	41.73
TraesCS6B01G047900.1	Wheat	cytosol	39.94	41.54
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	45.86	41.22
VIT_03s0063g00800.t01	Wine grape	cytosol	36.39	41.0
TraesCS4B01G331200.1	Wheat	cytosol	38.46	40.37
TraesCS5B01G240000.1	Wheat	cytosol	38.17	39.94
VIT_03s0063g00750.t01	Wine grape	cytosol	38.17	39.94
TraesCS6B01G046900.1	Wheat	mitochondrion	26.92	39.91
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	35.21	39.67
PGSC0003DMT400066384	Potato	cytosol	23.96	39.51
TraesCS5B01G059800.1	Wheat	cytosol	36.09	39.23
VIT_03s0063g00790.t01	Wine grape	cytosol	34.91	39.2
KRH50255	Soybean	cytosol	35.21	39.14
TraesCS3B01G141200.1	Wheat	cytosol	36.39	39.05
PGSC0003DMT400066389	Potato	cytosol	33.73	39.04
KRH50256	Soybean	cytosol	36.39	38.68
VIT_03s0063g00810.t01	Wine grape	cytosol	35.8	38.66
VIT_03s0063g00820.t01	Wine grape	cytosol	34.32	38.54
KRH71164	Soybean	cytosol	34.62	38.49
VIT_03s0063g00830.t01	Wine grape	cytosol	34.32	38.41
TraesCS2B01G526100.1	Wheat	cytosol	36.69	38.39
TraesCS5B01G235400.1	Wheat	cytosol	36.69	38.27
Solyc01g108570.2.1	Tomato	cytosol, extracellular	34.91	38.06
Solyc01g108540.2.1	Tomato	cytosol	34.62	37.86
PGSC0003DMT400066386	Potato	cytosol	34.91	37.82
Solyc01g108530.2.1	Tomato	cytosol	34.32	37.78
CDY67024	Canola	cytosol	36.09	37.77
TraesCS5B01G439900.2	Wheat	cytosol	37.28	37.72
PGSC0003DMT400066392	Potato	cytosol	34.91	37.7
VIT_03s0063g00740.t01	Wine grape	cytosol	35.8	37.58
Solyc01g108560.2.1	Tomato	cytosol, plastid	33.43	37.54
VIT_03s0063g00730.t01	Wine grape	cytosol	35.5	37.5
PGSC0003DMT400066385	Potato	cytosol	34.02	37.46
KRH71161	Soybean	cytosol	30.18	37.36
VIT_03s0063g00720.t01	Wine grape	cytosol	35.5	37.15
KRH71163	Soybean	cytosol	33.14	37.09
PGSC0003DMT400091080	Potato	cytosol	34.02	36.86
Solyc10g050880.1.1	Tomato	cytosol	34.02	36.86
Bra029912.1-P	Field mustard	cytosol	34.91	36.53
VIT_03s0063g00700.t01	Wine grape	cytosol	34.91	36.53
AT3G48700.1	Thale cress	cytosol	35.5	36.47
CDX77920	Canola	cytosol	33.43	36.22
Bra025117.1-P	Field mustard	cytosol	32.54	36.18
CDX83045	Canola	cytosol	34.62	36.11
Bra019558.1-P	Field mustard	cytosol	34.32	35.91
CDX68486	Canola	cytosol	34.32	35.91
CDY37916	Canola	cytosol	34.32	35.91
Bra029913.1-P	Field mustard	cytosol	34.62	35.89
KRH50257	Soybean	cytosol	34.32	35.69
CDY51033	Canola	cytosol	33.73	35.62
TraesCS5B01G240800.1	Wheat	extracellular, golgi	38.76	35.6
Solyc01g108580.2.1	Tomato	cytosol	32.84	35.58
TraesCS5B01G239300.1	Wheat	plastid	39.94	35.53
CDY28098	Canola	cytosol	33.73	35.4
TraesCS2B01G053400.1	Wheat	cytosol	35.8	35.07
AT3G48690.1	Thale cress	cytosol	33.43	34.88
PGSC0003DMT400066383	Potato	cytosol	31.36	34.87
Bra040667.1-P	Field mustard	cytosol	32.84	34.8
CDY28094	Canola	cytosol	32.84	34.58
CDY20870	Canola	cytosol	32.54	34.48
Bra025714.1-P	Field mustard	cytosol	24.26	34.45
Bra018807.1-P	Field mustard	cytosol	33.14	34.36
AT2G03550.1	Thale cress	cytosol	31.66	34.29
Bra018809.1-P	Field mustard	cytosol	31.95	34.18
CDY29339	Canola	cytosol	32.25	34.17
CDY51035	Canola	cytosol	32.84	34.05
KRH71162	Soybean	cytosol, nucleus	33.43	33.93
CDX96674	Canola	cytosol	32.54	33.85
AT1G49640.1	Thale cress	cytosol	31.07	33.33
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	31.07	33.33
PGSC0003DMT400088862	Potato	cytosol	33.73	33.14
TraesCS2B01G335600.1	Wheat	plastid	36.69	33.07
AT1G49660.1	Thale cress	cytosol	31.07	32.92
CDY41024	Canola	peroxisome	31.36	32.82
AT1G19190.1	Thale cress	cytosol	30.77	32.7
Bra016519.1-P	Field mustard	cytosol	31.36	32.42
KRH71160	Soybean	nucleus	37.28	32.06
CDY02986	Canola	cytosol	32.84	31.44
TraesCS2B01G006100.1	Wheat	cytosol	37.28	30.66
TraesCS2B01G006500.1	Wheat	cytosol	37.28	30.66
AT1G49650.1	Thale cress	mitochondrion	32.54	29.41
CDY16521	Canola	mitochondrion	32.84	29.21
TraesCS5B01G239700.1	Wheat	plastid	35.21	29.1
VIT_03s0063g00770.t01	Wine grape	plastid	35.8	29.09
TraesCS1B01G060800.1	Wheat	cytosol	38.17	29.05
Bra014213.1-P	Field mustard	mitochondrion	32.54	28.95
CDY51034	Canola	plastid	32.54	28.95
Bra018808.1-P	Field mustard	plastid	32.54	28.87
TraesCS2B01G007100.1	Wheat	cytosol	37.87	28.64
CDY28095	Canola	plastid	31.66	28.16
CDY32845	Canola	mitochondrion	30.47	28.14
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.12	22.56

Protein Annotations

EnsemblPlants:TraesCS5B01G240400.1	EnsemblPlantsGene:TraesCS5B01G240400	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF137	PFAM:PF07859	SEG:seg	SUPFAM:SSF53474	MapMan:35.1	:

Description

No Description!

Coordinates

chr5B:+:420714265..420715281

Molecular Weight (calculated)

36607.5 Da

IEP (calculated)

7.138

GRAVY (calculated)

-0.121

Length

338 amino acids

Sequence
(BLAST)

001: MDPDIVYKSG RVQRSGLTSR KSAGTDATTC VASKDVVIDA GTGLDARLFL PKSVPESQKL PVLVYFHGGA YVAESAFSLR YTSYVNALVA AARVVAVSVE
101: YRLAPEHPLP AAYDDAWAAL RWTATSCFSA GPETEPWLAD HGDPTRIFVA GNSSGCNMAH NVVMRAGKEG LLGGARIEGM VLLHPLFLGK APAPSEGTDT
201: TETAERNWRF VCAGKYGLDH TFSNPLVMPP EEWAVLGCRR ALVTAAELDP SRDRARMYVE ALRRSAWGGE EAVLYETDGE EHMYYFSRAA RSNSVVAEKA
301: AKEMAIVVSF IKRVTCTSPS DCNIRSTLRA PIRAQAPV

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.