Factsheet for GSMUA_Achr5P24460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, endoplasmic reticulum, peroxisome

Predictor Summary:

cytosol 2
nucleus 1
plastid 1
mitochondrion 1
endoplasmic reticulum 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr3P31620_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	GSMUA_Achr3P31620_001	AT4G10930.1	21798944
AT3G48690.1	GSMUA_Achr10P...	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P04360_001	Banana	cytosol	35.71	75.09
GSMUA_Achr6P04230_001	Banana	cytosol	27.92	73.5
GSMUA_Achr7P12950_001	Banana	cytosol	27.6	52.63
GSMUA_Achr3P06860_001	Banana	cytosol	19.97	50.2
GSMUA_Achr9P24230_001	Banana	cytosol	20.78	48.3
GSMUA_Achr7P18960_001	Banana	cytosol	24.51	46.6
TraesCS7A01G172500.1	Wheat	peroxisome	24.51	46.6
TraesCS7B01G077300.1	Wheat	peroxisome	24.51	46.6
HORVU5Hr1G017510.2	Barley	cytosol	24.03	46.25
Os06t0214300-01	Rice	plasma membrane, plastid	24.03	45.96
TraesCS6B01G046900.1	Wheat	mitochondrion	16.72	45.18
TraesCS5D01G248500.1	Wheat	cytosol	23.05	44.8
GSMUA_Achr5P11010_001	Banana	cytosol	21.59	44.48
KXG19591	Sorghum	cytosol	23.38	44.44
TraesCS5D01G068400.1	Wheat	cytosol	22.4	44.37
VIT_03s0063g00750.t01	Wine grape	cytosol	23.21	44.27
TraesCS5B01G059800.1	Wheat	cytosol	22.24	44.05
TraesCS5D01G249100.1	Wheat	cytosol	22.24	44.05
Os09t0461700-01	Rice	cytosol	22.73	43.89
Os09t0460400-01	Rice	cytosol	22.4	43.81
TraesCS3B01G141200.1	Wheat	cytosol	22.4	43.81
Zm00001d020732_P001	Maize	plastid	21.92	43.55
TraesCS7D01G173400.1	Wheat	cytosol	22.89	43.52
TraesCS3D01G124000.1	Wheat	cytosol	22.08	43.45
KRH50256	Soybean	cytosol	22.4	43.4
TraesCS7B01G077500.1	Wheat	golgi	22.73	43.34
TraesCS7D01G173500.1	Wheat	cytosol	22.73	43.34
Zm00001d044921_P001	Maize	cytosol, extracellular	23.21	43.33
Os09t0460500-00	Rice	cytosol	21.92	43.13
TraesCS5A01G065200.1	Wheat	cytosol, plastid	24.51	43.02
Os09t0460700-01	Rice	cytosol	21.75	42.95
TraesCS7D01G173300.1	Wheat	extracellular	24.84	42.86
VIT_03s0063g00820.t01	Wine grape	cytosol	20.94	42.86
TraesCS7A01G172600.1	Wheat	cytosol	22.73	42.81
CDX77920	Canola	cytosol	21.59	42.63
Os06t0214800-01	Rice	cytosol	22.73	42.55
HORVU6Hr1G005900.1	Barley	cytosol	22.24	42.55
Os02t0567800-01	Rice	cytosol	22.08	42.5
TraesCS5D01G076000.1	Wheat	cytosol	24.19	42.45
KRH50255	Soybean	cytosol	20.94	42.43
KXG25394	Sorghum	cytosol	22.73	42.42
TraesCS6A01G033400.1	Wheat	cytosol	22.4	42.33
TraesCS5B01G072000.1	Wheat	cytosol, mitochondrion	24.03	42.29
TraesCS2D01G315300.1	Wheat	cytosol	22.08	42.24
GSMUA_Achr9P24240_001	Banana	cytosol	22.24	42.15
KRH71164	Soybean	cytosol	20.78	42.11
VIT_03s0063g00800.t01	Wine grape	cytosol	20.45	42.0
AT3G48700.1	Thale cress	cytosol	22.4	41.95
Zm00001d020736_P001	Maize	endoplasmic reticulum, vacuole	23.54	41.91
KXG35781	Sorghum	cytosol	21.27	41.85
TraesCS6D01G038600.1	Wheat	cytosol	22.08	41.85
OQU89622	Sorghum	cytosol	21.59	41.82
Zm00001d037288_P001	Maize	cytosol, extracellular	21.1	41.8
Bra019558.1-P	Field mustard	cytosol	21.92	41.8
EER88069	Sorghum	cytosol	22.56	41.74
VIT_03s0063g00830.t01	Wine grape	cytosol	20.45	41.72
HORVU2Hr1G093140.1	Barley	cytosol	21.92	41.67
TraesCS2D01G389600.1	Wheat	cytosol	21.92	41.67
TraesCS6B01G047900.1	Wheat	cytosol	21.92	41.54
Zm00001d037180_P001	Maize	cytosol, extracellular	21.92	41.54
CDY37916	Canola	cytosol	21.75	41.49
CDY41024	Canola	peroxisome	21.75	41.49
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	23.7	41.48
EER89413	Sorghum	cytosol	22.89	41.47
HORVU0Hr1G005140.1	Barley	extracellular	21.27	41.46
AT3G48690.1	Thale cress	cytosol	21.75	41.36
VIT_03s0063g00740.t01	Wine grape	cytosol	21.59	41.3
TraesCS7D01G173800.1	Wheat	golgi	21.1	41.27
Zm00001d020737_P001	Maize	extracellular	21.1	41.27
Zm00001d050837_P001	Maize	cytosol	22.24	41.27
TraesCS5B01G240400.1	Wheat	mitochondrion	22.56	41.12
Bra029913.1-P	Field mustard	cytosol	21.75	41.1
CDX83045	Canola	cytosol	21.59	41.05
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	19.97	41.0
PGSC0003DMT400066384	Potato	cytosol	13.64	40.98
TraesCS5A01G242500.1	Wheat	plastid	22.56	40.88
CDX68486	Canola	cytosol	21.43	40.87
CDY67024	Canola	cytosol	21.43	40.87
TraesCS5D01G249000.1	Wheat	cytosol	20.78	40.76
Bra025714.1-P	Field mustard	cytosol	15.75	40.76
PGSC0003DMT400066385	Potato	cytosol	20.29	40.72
KXG35780	Sorghum	extracellular, vacuole	23.38	40.68
KRH71161	Soybean	cytosol	18.02	40.66
VIT_03s0063g00730.t01	Wine grape	cytosol	21.1	40.62
TraesCS5D01G248900.1	Wheat	cytosol	22.08	40.48
Bra025117.1-P	Field mustard	cytosol	19.97	40.46
Zm00001d016895_P001	Maize	cytosol	21.92	40.42
Solyc10g050880.1.1	Tomato	cytosol	20.45	40.38
EER88163	Sorghum	cytosol	20.78	40.38
TraesCS5D01G248700.1	Wheat	endoplasmic reticulum, vacuole	22.56	40.29
VIT_03s0063g00700.t01	Wine grape	cytosol	21.1	40.25
VIT_03s0063g00720.t01	Wine grape	cytosol	21.1	40.25
Zm00001d020707_P001	Maize	cytosol, extracellular	18.67	40.21
TraesCS5A01G242000.1	Wheat	cytosol	20.45	40.13
Os09t0455900-01	Rice	cytosol, plasma membrane	20.78	40.13
AT2G03550.1	Thale cress	cytosol	20.29	40.06
TraesCS5B01G240500.1	Wheat	cytosol	20.62	40.06
Zm00001d025549_P001	Maize	cytosol	20.94	40.06
KXG26418	Sorghum	cytosol	21.59	40.06
Os09t0461900-01	Rice	cytosol, plasma membrane	20.78	39.88
Solyc01g108540.2.1	Tomato	cytosol	19.97	39.81
TraesCS5A01G242300.1	Wheat	extracellular, golgi	22.4	39.77
Solyc01g108530.2.1	Tomato	cytosol	19.81	39.74
Os08t0474866-00	Rice	extracellular	23.86	39.73
Solyc01g108570.2.1	Tomato	cytosol, extracellular	19.97	39.68
Os09t0461500-01	Rice	golgi, mitochondrion	22.4	39.66
KRH71162	Soybean	cytosol, nucleus	21.43	39.64
PGSC0003DMT400066392	Potato	cytosol	20.13	39.62
HORVU5Hr1G069040.1	Barley	endoplasmic reticulum, vacuole	22.24	39.6
Solyc01g108560.2.1	Tomato	cytosol, plastid	19.32	39.53
TraesCS5B01G240200.1	Wheat	endoplasmic reticulum, vacuole	22.08	39.53
TraesCS5A01G242100.1	Wheat	cytosol	21.59	39.47
PGSC0003DMT400066386	Potato	cytosol	19.97	39.42
PGSC0003DMT400091080	Potato	cytosol	19.97	39.42
KRH50257	Soybean	cytosol	20.78	39.38
Os08t0475100-01	Rice	extracellular	21.27	39.34
Bra029912.1-P	Field mustard	cytosol	20.62	39.32
OQU85176	Sorghum	plastid	21.75	39.3
CDY28094	Canola	cytosol	20.45	39.25
VIT_03s0063g00790.t01	Wine grape	cytosol	19.16	39.2
TraesCS4B01G331200.1	Wheat	cytosol	20.45	39.13
TraesCS5A01G502600.1	Wheat	cytosol	20.29	39.06
PGSC0003DMT400066389	Potato	cytosol	18.51	39.04
TraesCS2B01G409800.1	Wheat	cytosol	21.1	39.04
Zm00001d020738_P001	Maize	plastid	21.1	39.04
AT1G19190.1	Thale cress	cytosol	20.13	38.99
VIT_03s0063g00810.t01	Wine grape	cytosol	19.81	38.98
TraesCS4B01G135300.1	Wheat	cytosol	20.29	38.94
TraesCS2D01G360900.1	Wheat	extracellular	24.84	38.83
TraesCS4D01G328100.1	Wheat	cytosol	20.29	38.82
CDX96674	Canola	cytosol	20.45	38.77
TraesCS2D01G389500.1	Wheat	cytosol	18.99	38.74
HORVU5Hr1G068140.1	Barley	cytosol	20.29	38.58
Bra040667.1-P	Field mustard	cytosol	19.97	38.56
CDY20870	Canola	cytosol	19.97	38.56
CDY29339	Canola	cytosol	19.97	38.56
Os09t0462100-01	Rice	plasma membrane	23.7	38.42
HORVU5Hr1G069090.1	Barley	endoplasmic reticulum, golgi	23.21	38.34
TraesCS5B01G235400.1	Wheat	cytosol	20.13	38.27
TraesCS2B01G381300.1	Wheat	vacuole	24.35	38.17
Solyc01g108580.2.1	Tomato	cytosol	19.32	38.14
TraesCS2A01G317400.1	Wheat	mitochondrion, plastid	21.92	38.14
EES15127	Sorghum	extracellular	23.21	38.13
TraesCS5D01G417100.1	Wheat	endoplasmic reticulum	20.78	37.98
KXG35760	Sorghum	cytosol	19.97	37.96
HORVU0Hr1G013180.1	Barley	endoplasmic reticulum, golgi, mitochondrion	23.21	37.93
KXG35785	Sorghum	extracellular, golgi, vacuole	23.21	37.93
TraesCS5B01G240000.1	Wheat	cytosol	19.81	37.77
HORVU0Hr1G019700.1	Barley	cytosol, mitochondrion	14.77	37.76
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	23.21	37.73
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	23.21	37.73
KXG35782	Sorghum	cytosol	20.62	37.69
CDY02986	Canola	cytosol	21.59	37.68
AT1G49660.1	Thale cress	cytosol	19.48	37.62
Bra016519.1-P	Field mustard	cytosol	19.97	37.61
TraesCS5B01G412100.1	Wheat	endoplasmic reticulum	20.45	37.61
Zm00001d020740_P001	Maize	cytosol	20.13	37.58
PGSC0003DMT400088862	Potato	cytosol	20.94	37.5
TraesCS5A01G242600.1	Wheat	cytosol	19.64	37.35
TraesCS5D01G244200.1	Wheat	cytosol	19.64	37.35
CDY28098	Canola	cytosol	19.48	37.27
HORVU3Hr1G022640.1	Barley	mitochondrion	22.08	37.26
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	22.73	37.23
Os06t0214850-00	Rice	plasma membrane	21.27	37.22
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	22.89	37.2
Os09t0455500-01	Rice	cytosol	19.32	37.19
Zm00001d031801_P001	Maize	endoplasmic reticulum	21.43	37.18
Bra018807.1-P	Field mustard	cytosol	19.64	37.12
KRH71163	Soybean	cytosol	18.18	37.09
TraesCS5A01G242900.1	Wheat	extracellular, golgi	22.89	36.91
OQU80637	Sorghum	plasma membrane	23.7	36.87
TraesCS4A01G437700.1	Wheat	cytosol	14.94	36.65
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	21.1	36.62
CDY51035	Canola	cytosol	19.32	36.5
Os08t0475000-00	Rice	cytosol	20.29	36.44
Zm00001d031804_P001	Maize	cytosol	19.32	36.28
TraesCS2B01G335600.1	Wheat	plastid	22.08	36.27
CDY51033	Canola	cytosol	18.83	36.25
OQU81663	Sorghum	cytosol	20.94	36.24
OQU80639	Sorghum	cytosol	19.64	36.23
KXG35761	Sorghum	cytosol	19.16	36.2
KRH71160	Soybean	nucleus	23.05	36.13
HORVU5Hr1G068800.1	Barley	plastid	22.24	36.05
TraesCS5A01G241200.1	Wheat	plastid	22.24	35.58
AT1G49640.1	Thale cress	cytosol	18.18	35.56
KXG35783	Sorghum	extracellular, vacuole	20.94	35.54
Zm00001d005909_P001	Maize	plasma membrane	20.78	35.46
TraesCS2B01G053400.1	Wheat	cytosol	19.81	35.36
TraesCS5D01G247700.1	Wheat	plastid	22.08	35.32
PGSC0003DMT400066383	Potato	cytosol	17.37	35.2
Bra018809.1-P	Field mustard	cytosol	18.02	35.13
OQU89623	Sorghum	mitochondrion	21.75	35.08
TraesCS5B01G239300.1	Wheat	plastid	21.43	34.74
Os09t0460300-01	Rice	plastid	21.43	34.11
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	17.37	33.97
HORVU5Hr1G093500.4	Barley	plastid	20.45	33.96
TraesCS5A01G242800.1	Wheat	extracellular, plasma membrane	20.29	33.78
TraesCS5B01G240800.1	Wheat	extracellular, golgi	20.13	33.7
TraesCS4D01G130000.1	Wheat	extracellular, vacuole	20.29	33.6
HORVU5Hr1G098770.1	Barley	plasma membrane	19.64	33.43
Bra018808.1-P	Field mustard	plastid	20.29	32.81
TraesCS4A01G438000.1	Wheat	cytosol	10.88	32.68
TraesCS5D01G249400.1	Wheat	endoplasmic reticulum, plasma membrane	19.81	32.62
CDY51034	Canola	plastid	19.97	32.37
TraesCS5A01G241700.1	Wheat	plastid	19.64	32.18
TraesCS2B01G006100.1	Wheat	cytosol	21.43	32.12
TraesCS2B01G006500.1	Wheat	cytosol	21.43	32.12
TraesCSU01G240900.1	Wheat	cytosol	21.43	32.12
TraesCS5D01G248100.1	Wheat	plastid	19.64	32.1
AT1G49650.1	Thale cress	mitochondrion	19.48	32.09
CDY28095	Canola	plastid	19.64	31.84
HORVU2Hr1G002620.1	Barley	cytosol	21.1	31.71
CDY16521	Canola	mitochondrion	19.48	31.58
TraesCS2D01G015900.1	Wheat	cytosol	20.94	31.39
Bra014213.1-P	Field mustard	mitochondrion	19.32	31.32
CDY32845	Canola	mitochondrion	18.34	30.87
TraesCS7D01G046800.1	Wheat	cytosol	18.34	30.79
TraesCS2A01G363400.1	Wheat	endoplasmic reticulum, extracellular, vacuole	20.13	30.47
TraesCS4A01G436300.1	Wheat	cytosol	19.32	30.43
TraesCS1B01G060800.1	Wheat	cytosol	21.92	30.41
TraesCS4A01G436500.1	Wheat	cytosol	18.99	30.39
TraesCSU01G158400.1	Wheat	cytosol	19.48	30.3
TraesCS4A01G183300.2	Wheat	extracellular, golgi	20.45	30.29
VIT_03s0063g00770.t01	Wine grape	plastid	20.45	30.29
TraesCS2D01G051400.1	Wheat	cytosol	21.92	29.87
TraesCS5A01G407200.1	Wheat	plastid	20.45	29.58
TraesCS2B01G007100.1	Wheat	cytosol	21.43	29.53
HORVU0Hr1G013160.1	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole	12.34	29.23
HORVU2Hr1G067270.2	Barley	cytosol	19.97	29.22
HORVU5Hr1G068960.1	Barley	cytosol	19.97	29.22
TraesCS2D01G022400.1	Wheat	cytosol	21.59	29.17
TraesCSU01G008500.1	Wheat	cytosol	21.43	28.95
TraesCS4A01G436100.1	Wheat	cytosol	19.97	28.94
TraesCS2A01G021800.1	Wheat	cytosol	20.78	28.64
TraesCS5B01G239700.1	Wheat	plastid	18.99	28.61
TraesCS4A01G437800.1	Wheat	cytosol	19.32	28.47
TraesCSU01G143300.1	Wheat	cytosol	20.45	28.38
HORVU0Hr1G004410.1	Barley	cytosol	20.13	28.38
Os07t0526600-01	Rice	extracellular	21.1	28.26
EER97903	Sorghum	cytosol	20.62	28.04
Os09t0435700-00	Rice	mitochondrion	19.32	27.93
Os07t0501400-00	Rice	plastid	20.29	27.9
TraesCS7A01G093800.1	Wheat	cytosol, plastid	19.48	27.78
HORVU2Hr1G003300.1	Barley	cytosol	21.43	27.67
TraesCS4A01G393200.1	Wheat	cytosol	19.32	27.48
OQU76051	Sorghum	golgi, plasma membrane, vacuole	21.59	27.42
TraesCS7D01G046600.1	Wheat	cytosol	18.99	27.4
HORVU0Hr1G013200.3	Barley	plastid	16.56	27.27
TraesCS7D01G089100.1	Wheat	cytosol	19.16	27.25
HORVU7Hr1G009170.1	Barley	cytosol	18.67	27.25
TraesCS7D01G046900.1	Wheat	mitochondrion	19.81	27.05
TraesCS3D01G500400.1	Wheat	cytosol	3.08	11.88

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr5G24460_001	EnsemblPlants:GSMUA_Achr5P24460_001	EnsemblPlants:GSMUA_Achr5T24460_001
InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS	UniProt:M0T1C1	PFAM:PF07859	ScanProsite:PS01174	PANTHER:PTHR23024
PANTHER:PTHR23024:SF257	SUPFAM:SSF53474	UniParc:UPI0002961247	SEG:seg	:	:

Description

Putative Probable gibberellin receptor GID1L1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24460_001]

Coordinates

chr5:-:25792824..25796076

Molecular Weight (calculated)

67718.4 Da

IEP (calculated)

5.372

GRAVY (calculated)

-0.103

Length

616 amino acids

Sequence
(BLAST)

001: MDADADADDE VVIDAPPFIR VYKSGRIERL VGTEVLPAGL DPATGVASKD VLIPVLVYYH GGGFVIETAF SPTYHNYLNS LVAAAGVVAV SVDYRRAPEH
101: PLPAAYDDSW AALRWVASRP TEETWLSERG DLGRVFLAGD SAGANIVHQM ALRAAEDGLG GGDTEIRGLL LVHPFFCGAE PLESESWDPK AREWVERFLA
201: ALPCRRVLVT VAEKDMLRKK GREYQEALKR SGWEGEAELL ETVGENHVFH LIDPKSDKAL AKLQARDRYW DQFDESAVWR PSSSFVGFIF HQTASLLPEK
301: MVRPFTKLLA NQSIPSYRLL LIVLLTSLGT IQHIVDGVEL STAGIAGYLT MDSYICDTLS SLPQLSFSTV PASVDPATGV SSKDRRIPVL VYYHGGAFCI
401: GNPFMPMFHN YLNSLVARAH VVAVSVNYRL APEHPIPAAY DDSWKALRWV ASHANGGPGP DRWLADHADF DRLFLAGDSA GANIAHHMAM RAGAEGLERG
501: VGVHGVRFWE LACPTAAAGV DDPMINPLAD GAPSLAGMDR KRVLVCVGVE DVLRDRGRAY YHRLREKRCG EVELYETDGK GHTFHFFDPT CDEALAQDRA
601: ICCFLDRESM RESAIE

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.