Factsheet for Zm00001d016895_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d052230_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT3G48690.1	Zm00001d052230_P001	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050837_P001	Maize	cytosol	90.42	90.96
OQU85176	Sorghum	plastid	87.43	85.63
TraesCS3B01G141200.1	Wheat	cytosol	73.35	77.78
TraesCS3D01G124000.1	Wheat	cytosol	72.46	77.32
TraesCS5B01G059800.1	Wheat	cytosol	70.96	76.21
TraesCS5D01G068400.1	Wheat	cytosol	70.06	75.24
Os02t0567800-01	Rice	cytosol	71.56	74.69
HORVU3Hr1G022640.1	Barley	mitochondrion	70.96	64.93
Zm00001d025549_P001	Maize	cytosol	58.38	60.56
Zm00001d020732_P001	Maize	plastid	47.9	51.61
GSMUA_Achr3P06860_001	Banana	cytosol	37.43	51.02
Zm00001d020737_P001	Maize	extracellular	47.6	50.48
GSMUA_Achr6P04360_001	Banana	cytosol	43.11	49.15
Zm00001d037288_P001	Maize	cytosol, extracellular	45.51	48.87
Zm00001d020738_P001	Maize	plastid	47.31	47.45
GSMUA_Achr6P04230_001	Banana	cytosol	33.23	47.44
GSMUA_Achr7P12950_001	Banana	cytosol	44.31	45.82
Zm00001d031804_P001	Maize	cytosol	44.61	45.43
Solyc01g108540.2.1	Tomato	cytosol	41.92	45.31
PGSC0003DMT400066386	Potato	cytosol	42.22	45.19
Zm00001d020707_P001	Maize	cytosol, extracellular	38.62	45.1
Zm00001d037180_P001	Maize	cytosol, extracellular	43.41	44.62
PGSC0003DMT400091080	Potato	cytosol	41.32	44.23
Zm00001d005910_P001	Maize	cytosol	43.11	44.04
Zm00001d044921_P001	Maize	cytosol, extracellular	43.41	43.94
Solyc01g108570.2.1	Tomato	cytosol, extracellular	40.72	43.87
Solyc01g108560.2.1	Tomato	cytosol, plastid	39.22	43.52
VIT_03s0063g00750.t01	Wine grape	cytosol	41.92	43.34
Solyc01g108580.2.1	Tomato	cytosol	40.42	43.27
PGSC0003DMT400066392	Potato	cytosol	40.12	42.81
KRH50255	Soybean	cytosol	38.92	42.76
VIT_03s0063g00700.t01	Wine grape	cytosol	41.32	42.72
KRH71162	Soybean	cytosol, nucleus	42.52	42.64
VIT_03s0063g00720.t01	Wine grape	cytosol	41.02	42.41
Zm00001d020740_P001	Maize	cytosol	41.62	42.12
KRH71164	Soybean	cytosol	38.32	42.11
PGSC0003DMT400066384	Potato	cytosol	25.75	41.95
KRH50256	Soybean	cytosol	39.82	41.82
PGSC0003DMT400066389	Potato	cytosol	36.53	41.78
Zm00001d031805_P001	Maize	cytosol	33.83	41.7
CDX77920	Canola	cytosol	38.92	41.67
KRH71163	Soybean	cytosol	37.43	41.39
VIT_03s0063g00830.t01	Wine grape	cytosol	37.43	41.39
Zm00001d050493_P001	Maize	cytosol, extracellular	40.42	41.28
VIT_03s0063g00800.t01	Wine grape	cytosol	36.83	41.0
VIT_03s0063g00740.t01	Wine grape	cytosol	39.52	40.99
Zm00001d020736_P001	Maize	endoplasmic reticulum, vacuole	42.22	40.75
PGSC0003DMT400066385	Potato	cytosol	37.43	40.72
Solyc01g108530.2.1	Tomato	cytosol	37.43	40.72
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	36.53	40.67
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	42.81	40.62
Bra019558.1-P	Field mustard	cytosol	39.22	40.56
CDY37916	Canola	cytosol	39.22	40.56
VIT_03s0063g00820.t01	Wine grape	cytosol	36.53	40.53
Bra025117.1-P	Field mustard	cytosol	36.83	40.46
Zm00001d005909_P001	Maize	plasma membrane	43.71	40.44
AT3G48690.1	Thale cress	cytosol	39.22	40.43
VIT_03s0063g00810.t01	Wine grape	cytosol	37.72	40.26
VIT_03s0063g00790.t01	Wine grape	cytosol	36.23	40.2
PGSC0003DMT400088862	Potato	cytosol	41.02	39.83
Solyc10g050880.1.1	Tomato	cytosol	37.13	39.74
VIT_03s0063g00730.t01	Wine grape	cytosol	38.02	39.69
AT3G48700.1	Thale cress	cytosol	38.92	39.51
AT2G03550.1	Thale cress	cytosol	36.83	39.42
KRH71161	Soybean	cytosol	32.04	39.19
KRH50257	Soybean	cytosol	37.72	38.77
Bra029912.1-P	Field mustard	cytosol	37.13	38.39
CDY67024	Canola	cytosol	37.13	38.39
Zm00001d020744_P001	Maize	cytosol	33.83	38.31
CDX83045	Canola	cytosol	36.83	37.96
Bra018807.1-P	Field mustard	cytosol	36.83	37.73
Bra029913.1-P	Field mustard	cytosol	36.83	37.73
CDY51035	Canola	cytosol	36.83	37.73
CDX68486	Canola	cytosol	36.23	37.46
CDY28094	Canola	cytosol	35.63	37.07
CDY20870	Canola	cytosol	35.33	36.99
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	41.62	36.68
Bra040667.1-P	Field mustard	cytosol	34.73	36.36
Zm00001d031801_P001	Maize	endoplasmic reticulum	38.62	36.34
CDY41024	Canola	peroxisome	35.03	36.22
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	34.13	36.19
AT1G49660.1	Thale cress	cytosol	34.43	36.05
CDY29339	Canola	cytosol	34.43	36.05
AT1G19190.1	Thale cress	cytosol	34.13	35.85
PGSC0003DMT400066383	Potato	cytosol	32.34	35.53
CDY28098	Canola	cytosol	34.13	35.4
CDY51033	Canola	cytosol	33.83	35.31
Bra025714.1-P	Field mustard	cytosol	25.15	35.29
Bra016519.1-P	Field mustard	cytosol	34.43	35.17
CDY02986	Canola	cytosol	37.13	35.13
CDX96674	Canola	cytosol	34.13	35.08
AT1G49640.1	Thale cress	cytosol	32.93	34.92
KRH71160	Soybean	nucleus	41.02	34.86
Bra018809.1-P	Field mustard	cytosol	32.63	34.49
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	38.92	34.3
Zm00001d020742_P001	Maize	cytosol	28.74	33.33
CDY51034	Canola	plastid	36.23	31.84
Bra018808.1-P	Field mustard	plastid	36.23	31.76
CDY28095	Canola	plastid	35.93	31.58
CDY16521	Canola	mitochondrion	34.73	30.53
AT1G49650.1	Thale cress	mitochondrion	34.13	30.48
CDY32845	Canola	mitochondrion	33.23	30.33
Bra014213.1-P	Field mustard	mitochondrion	34.43	30.26
VIT_03s0063g00770.t01	Wine grape	plastid	36.83	29.57
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	40.42	21.92

Protein Annotations

EnsemblPlants:Zm00001d016895_P001	EnsemblPlants:Zm00001d016895_T001	EnsemblPlantsGene:Zm00001d016895	EntrezGene:100282074	Gene3D:3.40.50.1820	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3
InterPro:IPR029058	PANTHER:PTHR23024	PANTHER:PTHR23024:SF180	PFAM:PF07859	ProteinID:AQK71897.1	SEG:seg
SUPFAM:SSF53474	UniParc:UPI000221416F	UniProt:A0A1D6HB17	MapMan:35.1	:	:

Description

Gibberellin receptor GID1L2

Coordinates

chr5:+:179608070..179609074

Molecular Weight (calculated)

35319.4 Da

IEP (calculated)

6.180

GRAVY (calculated)

0.087

Length

334 amino acids

Sequence
(BLAST)

001: MAPSKPLFPV AVPAPDPSDE VVREFGPLLR IYKSGRIERP LVAPPVEPGH DAATGVQSKD VHLGSYSARL YLPPSAGAGA KLPVVVYVHG GGFVAESAAS
101: PNYHLFLNRL AAACPALAVS VDYRLAPEHP LPAGYDDCLA ALKWVLSAAD PWVAAHGDLA RVFVAGDSAG GNVCHHLAIH PDVVQAQRAR QAGAPPLKGA
201: VLIHPWFWGS EAVGEEPRDP AARAMGVGLW LFACPETNGL DDPRMNPLAP AAPGLHTLAC ERVMVCAAEG DFLRWRGRAY AEAVAAARGG DLGEAAGVEL
301: LETMGEGHVF FLFKPDCYEA KEMMHKMVAF INAP

Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)

001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA

Arabidopsis Description

CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.