Factsheet for Zm00001d037180_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d052230_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT3G48690.1	Zm00001d052230_P001	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G173800.1	Wheat	golgi	71.69	73.97
Os06t0214850-00	Rice	plasma membrane	75.38	69.6
HORVU0Hr1G019700.1	Barley	cytosol, mitochondrion	50.46	68.05
Zm00001d044921_P001	Maize	cytosol, extracellular	48.92	48.18
GSMUA_Achr3P06860_001	Banana	cytosol	36.0	47.76
GSMUA_Achr6P04360_001	Banana	cytosol	42.77	47.44
GSMUA_Achr6P04230_001	Banana	cytosol	34.15	47.44
Zm00001d020737_P001	Maize	extracellular	44.92	46.35
Zm00001d005910_P001	Maize	cytosol	45.54	45.26
Zm00001d025549_P001	Maize	cytosol	44.31	44.72
Zm00001d037288_P001	Maize	cytosol, extracellular	42.77	44.69
PGSC0003DMT400066384	Potato	cytosol	28.0	44.39
Zm00001d020707_P001	Maize	cytosol, extracellular	38.46	43.71
Zm00001d031805_P001	Maize	cytosol	36.31	43.54
Zm00001d016895_P001	Maize	cytosol	44.62	43.41
GSMUA_Achr7P12950_001	Banana	cytosol	42.46	42.72
Zm00001d020740_P001	Maize	cytosol	43.08	42.42
VIT_03s0063g00720.t01	Wine grape	cytosol	42.15	42.41
Zm00001d031804_P001	Maize	cytosol	42.46	42.07
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	45.54	42.05
Zm00001d050837_P001	Maize	cytosol	42.77	41.87
KRH50256	Soybean	cytosol	40.92	41.82
VIT_03s0063g00700.t01	Wine grape	cytosol	41.54	41.8
KRH71162	Soybean	cytosol, nucleus	42.77	41.74
VIT_03s0063g00830.t01	Wine grape	cytosol	38.77	41.72
VIT_03s0063g00800.t01	Wine grape	cytosol	38.46	41.67
CDX77920	Canola	cytosol	39.38	41.03
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	37.85	41.0
Zm00001d020732_P001	Maize	plastid	39.08	40.97
Zm00001d020738_P001	Maize	plastid	41.85	40.84
KRH71164	Soybean	cytosol	38.15	40.79
PGSC0003DMT400091080	Potato	cytosol	39.08	40.71
Zm00001d031801_P001	Maize	endoplasmic reticulum	44.31	40.56
VIT_03s0063g00750.t01	Wine grape	cytosol	40.31	40.56
Zm00001d020736_P001	Maize	endoplasmic reticulum, vacuole	43.08	40.46
KRH50255	Soybean	cytosol	37.85	40.46
Solyc01g108540.2.1	Tomato	cytosol	38.46	40.45
Zm00001d050493_P001	Maize	cytosol, extracellular	40.62	40.37
CDY37916	Canola	cytosol	40.0	40.25
PGSC0003DMT400066385	Potato	cytosol	37.85	40.07
VIT_03s0063g00740.t01	Wine grape	cytosol	39.69	40.06
VIT_03s0063g00790.t01	Wine grape	cytosol	36.92	39.87
PGSC0003DMT400066386	Potato	cytosol	38.15	39.74
Solyc10g050880.1.1	Tomato	cytosol	38.15	39.74
Solyc01g108530.2.1	Tomato	cytosol	37.54	39.74
VIT_03s0063g00730.t01	Wine grape	cytosol	39.08	39.69
Bra019558.1-P	Field mustard	cytosol	39.38	39.63
CDY67024	Canola	cytosol	39.38	39.63
Solyc01g108560.2.1	Tomato	cytosol, plastid	36.62	39.53
Solyc01g108580.2.1	Tomato	cytosol	37.85	39.42
Solyc01g108570.2.1	Tomato	cytosol, extracellular	37.54	39.35
Zm00001d020744_P001	Maize	cytosol	35.69	39.32
Bra029912.1-P	Field mustard	cytosol	39.08	39.32
PGSC0003DMT400066392	Potato	cytosol	37.85	39.3
AT3G48700.1	Thale cress	cytosol	39.69	39.21
VIT_03s0063g00820.t01	Wine grape	cytosol	36.31	39.2
VIT_03s0063g00810.t01	Wine grape	cytosol	37.54	38.98
PGSC0003DMT400066383	Potato	cytosol	36.31	38.82
Zm00001d005909_P001	Maize	plasma membrane	43.08	38.78
PGSC0003DMT400066389	Potato	cytosol	34.77	38.7
AT1G19190.1	Thale cress	cytosol	37.54	38.36
AT3G48690.1	Thale cress	cytosol	38.15	38.27
CDX83045	Canola	cytosol	38.15	38.27
KRH71161	Soybean	cytosol	32.0	38.1
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	36.92	38.1
CDX68486	Canola	cytosol	37.85	38.08
Bra029913.1-P	Field mustard	cytosol	38.15	38.04
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	44.0	37.73
CDY28098	Canola	cytosol	37.23	37.58
AT2G03550.1	Thale cress	cytosol	36.0	37.5
CDY51033	Canola	cytosol	36.62	37.19
Bra025117.1-P	Field mustard	cytosol	34.77	37.17
CDY41024	Canola	peroxisome	36.62	36.84
PGSC0003DMT400088862	Potato	cytosol	38.77	36.63
KRH71163	Soybean	cytosol	33.85	36.42
CDY29339	Canola	cytosol	35.69	36.36
Bra025714.1-P	Field mustard	cytosol	26.46	36.13
Bra040667.1-P	Field mustard	cytosol	35.38	36.05
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	41.54	35.62
Bra018809.1-P	Field mustard	cytosol	34.46	35.44
CDY20870	Canola	cytosol	34.77	35.42
CDY28094	Canola	cytosol	34.77	35.2
AT1G49660.1	Thale cress	cytosol	34.15	34.8
Zm00001d020742_P001	Maize	cytosol	30.77	34.72
AT1G49640.1	Thale cress	cytosol	33.54	34.6
KRH50257	Soybean	cytosol	34.46	34.46
CDX96674	Canola	cytosol	34.15	34.15
Bra018807.1-P	Field mustard	cytosol	34.15	34.05
CDY51035	Canola	cytosol	33.54	33.44
KRH71160	Soybean	nucleus	40.0	33.08
Bra016519.1-P	Field mustard	cytosol	33.23	33.03
CDY02986	Canola	cytosol	34.77	32.01
AT1G49650.1	Thale cress	mitochondrion	36.62	31.82
CDY51034	Canola	plastid	36.62	31.32
VIT_03s0063g00770.t01	Wine grape	plastid	40.0	31.25
CDY16521	Canola	mitochondrion	36.31	31.05
Bra018808.1-P	Field mustard	plastid	36.31	30.97
Bra014213.1-P	Field mustard	mitochondrion	36.0	30.79
CDY28095	Canola	plastid	36.0	30.79
CDY32845	Canola	mitochondrion	34.15	30.33
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	41.54	21.92

Protein Annotations

EnsemblPlants:Zm00001d037180_P001	EnsemblPlants:Zm00001d037180_T001	EnsemblPlantsGene:Zm00001d037180	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058
PANTHER:PTHR23024	PANTHER:PTHR23024:SF154	PFAM:PF07859	ProteinID:AQK83241.1	SUPFAM:SSF53474	UniParc:UPI0002214D56
UniProt:A0A1D6LVE5	MapMan:35.1	:	:	:	:

Description

Gibberellin receptor GID1L2

Coordinates

chr6:-:114877169..114878146

Molecular Weight (calculated)

34605.9 Da

IEP (calculated)

6.346

GRAVY (calculated)

-0.053

Length

325 amino acids

Sequence
(BLAST)

001: MGDSTATNPS SPTAAMDPDS EVVFDFQPYL CQYKSGRIHR PGGAPTVPAG TDPATGVVSK DIRSGPASAR VYLPPGATGK IPVIVYFHGG GFVVGSPARP
101: GTHGYLNDLV ARSGAIGVSV YYRLAPEHKL PAAYDDAWAA LRWAVTLGGE DPWLLEHADL SRVFLAGCSA GANIAHDTAV RASAAGVAIR GLALVHPYFT
201: GREAVGGETA AFGPEIRPSM DRTWRFVVSD TVGLDDPRVN PFVDDAARKA SAGIPCQRVL VCVAENDFLL KERALWYHRE IKASGYAGEV ELFESKGVGH
301: AFHFDMLDSE QGVALQERIV AFINK

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.