Factsheet for Zm00001d031805_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d052230_P001
Zm00001d053989_P003

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	Zm00001d053989_P003	AT4G10930.1	21798944
AT3G48690.1	Zm00001d052230_P001	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d050493_P001	Maize	cytosol, extracellular	85.61	70.95
EES16153	Sorghum	cytosol	81.18	65.67
Os08t0475400-02	Rice	cytosol, plasma membrane	76.38	63.3
KXG21709	Sorghum	cytosol, mitochondrion, plastid	64.58	62.5
TraesCS5D01G444200.1	Wheat	cytosol	74.17	60.54
TraesCS5A01G437300.1	Wheat	cytosol	73.06	59.64
TraesCS5B01G439900.2	Wheat	cytosol	73.06	59.28
TraesCS5A01G450100.1	Wheat	cytosol	69.0	58.62
Zm00001d005910_P001	Maize	cytosol	56.09	46.48
GSMUA_Achr7P18960_001	Banana	cytosol	51.66	43.21
Zm00001d020744_P001	Maize	cytosol	43.91	40.34
KRH71161	Soybean	cytosol	40.22	39.93
VIT_03s0063g00750.t01	Wine grape	cytosol	45.02	37.77
Solyc01g108570.2.1	Tomato	cytosol, extracellular	43.17	37.74
Bra025117.1-P	Field mustard	cytosol	42.07	37.5
Zm00001d020732_P001	Maize	plastid	42.8	37.42
Zm00001d044921_P001	Maize	cytosol, extracellular	45.39	37.27
VIT_03s0063g00790.t01	Wine grape	cytosol	40.96	36.88
PGSC0003DMT400091080	Potato	cytosol	42.44	36.86
KRH50256	Soybean	cytosol	43.17	36.79
Zm00001d020707_P001	Maize	cytosol, extracellular	38.75	36.71
CDY20870	Canola	cytosol	43.17	36.68
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	40.59	36.67
VIT_03s0063g00700.t01	Wine grape	cytosol	43.54	36.53
VIT_03s0063g00720.t01	Wine grape	cytosol	43.54	36.53
Zm00001d037180_P001	Maize	cytosol, extracellular	43.54	36.31
Zm00001d031804_P001	Maize	cytosol	43.91	36.28
PGSC0003DMT400066392	Potato	cytosol	41.7	36.1
Zm00001d020740_P001	Maize	cytosol	43.91	36.06
Zm00001d037288_P001	Maize	cytosol, extracellular	41.33	36.01
VIT_03s0063g00730.t01	Wine grape	cytosol	42.44	35.94
Solyc01g108540.2.1	Tomato	cytosol	40.96	35.92
PGSC0003DMT400066386	Potato	cytosol	41.33	35.9
Solyc01g108560.2.1	Tomato	cytosol, plastid	39.85	35.88
VIT_03s0063g00830.t01	Wine grape	cytosol	39.85	35.76
Bra040667.1-P	Field mustard	cytosol	42.07	35.74
VIT_03s0063g00740.t01	Wine grape	cytosol	42.44	35.71
Solyc01g108580.2.1	Tomato	cytosol	40.96	35.58
CDY28094	Canola	cytosol	42.07	35.51
CDY29339	Canola	cytosol	41.7	35.42
VIT_03s0063g00800.t01	Wine grape	cytosol	39.11	35.33
Bra018807.1-P	Field mustard	cytosol	42.44	35.28
CDY51035	Canola	cytosol	42.44	35.28
PGSC0003DMT400066389	Potato	cytosol	38.01	35.27
CDX77920	Canola	cytosol	40.59	35.26
PGSC0003DMT400066385	Potato	cytosol	39.85	35.18
Solyc01g108530.2.1	Tomato	cytosol	39.48	34.85
KRH71162	Soybean	cytosol, nucleus	42.8	34.83
VIT_03s0063g00810.t01	Wine grape	cytosol	40.22	34.82
AT1G49660.1	Thale cress	cytosol	40.96	34.8
Zm00001d025549_P001	Maize	cytosol	41.33	34.78
VIT_03s0063g00820.t01	Wine grape	cytosol	38.38	34.55
KRH50255	Soybean	cytosol	38.75	34.54
KRH71164	Soybean	cytosol	38.75	34.54
Zm00001d005905_P001	Maize	endoplasmic reticulum, golgi	44.65	34.38
Zm00001d031801_P001	Maize	endoplasmic reticulum	45.02	34.37
Zm00001d020737_P001	Maize	extracellular	39.85	34.29
KRH71163	Soybean	cytosol	38.01	34.11
Zm00001d016895_P001	Maize	cytosol	41.7	33.83
CDY37916	Canola	cytosol	40.22	33.75
AT2G03550.1	Thale cress	cytosol	38.75	33.65
Zm00001d020736_P001	Maize	endoplasmic reticulum, vacuole	42.8	33.53
Bra019558.1-P	Field mustard	cytosol	39.85	33.44
CDY41024	Canola	peroxisome	39.85	33.44
CDY67024	Canola	cytosol	39.85	33.44
AT3G48700.1	Thale cress	cytosol	40.59	33.43
AT1G19190.1	Thale cress	cytosol	39.11	33.33
AT3G48690.1	Thale cress	cytosol	39.85	33.33
CDX83045	Canola	cytosol	39.85	33.33
Zm00001d020742_P001	Maize	cytosol	35.42	33.33
PGSC0003DMT400088862	Potato	cytosol	42.07	33.14
Bra029913.1-P	Field mustard	cytosol	39.85	33.13
Bra029912.1-P	Field mustard	cytosol	39.48	33.13
Solyc10g050880.1.1	Tomato	cytosol	38.01	33.01
Zm00001d020738_P001	Maize	plastid	40.22	32.73
AT1G49640.1	Thale cress	cytosol	38.01	32.7
CDY02986	Canola	cytosol	42.44	32.58
Zm00001d050837_P001	Maize	cytosol	39.85	32.53
CDX68486	Canola	cytosol	38.75	32.51
CDY51033	Canola	cytosol	38.38	32.5
CDY28098	Canola	cytosol	38.38	32.3
Bra018809.1-P	Field mustard	cytosol	36.53	31.33
Zm00001d050479_P001	Maize	extracellular, plasma membrane, vacuole	43.54	31.13
CDY51034	Canola	plastid	43.54	31.05
AT1G49650.1	Thale cress	mitochondrion	42.8	31.02
Bra018808.1-P	Field mustard	plastid	43.54	30.97
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	35.79	30.79
PGSC0003DMT400066384	Potato	cytosol	23.25	30.73
CDY28095	Canola	plastid	42.8	30.53
CDX96674	Canola	cytosol	36.53	30.46
CDY16521	Canola	mitochondrion	42.44	30.26
PGSC0003DMT400066383	Potato	cytosol	33.95	30.26
Bra014213.1-P	Field mustard	mitochondrion	42.07	30.0
KRH50257	Soybean	cytosol	35.79	29.85
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	41.7	29.82
Bra016519.1-P	Field mustard	cytosol	35.79	29.66
CDY32845	Canola	mitochondrion	39.85	29.51
Bra025714.1-P	Field mustard	cytosol	25.83	29.41
Zm00001d005909_P001	Maize	plasma membrane	39.11	29.36
KRH71160	Soybean	nucleus	42.44	29.26
VIT_03s0063g00770.t01	Wine grape	plastid	42.8	27.88

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1D6KLB5	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	ProteinID:ONM03682.1
PFAM:PF07859	PANTHER:PTHR23024	PANTHER:PTHR23024:SF150	SUPFAM:SSF53474	UniParc:UPI0008454242	EnsemblPlantsGene:Zm00001d031805
EnsemblPlants:Zm00001d031805_P001	EnsemblPlants:Zm00001d031805_T001	SEG:seg	:	:	:

Description

Gibberellin receptor GID1L2

Coordinates

chr1:+:202330757..202332503

Molecular Weight (calculated)

29288.8 Da

IEP (calculated)

4.708

GRAVY (calculated)

0.123

Length

271 amino acids

Sequence
(BLAST)

001: MATAPAAPPP ASADDEIIYE SMPCIRVYKD RVERYFGTEF VAASTNDSTG VASRDVVISP NVSARLYLPR LDDGNAKLPI FVYYHGGGFC IGSAFNPIFH
101: DYFNCLVALA DILVVSVEYR LAPEHPVPAA YADSWEALAW VISHLGPAGD GARDPWIAGH ADFSRLFLGG ESAGSNIAHH MAMRAAAEGL AHGARIRGLV
201: MIHPYFLGTD KVPSDDLSPE VRESLGSLWR FMCPTTTGED DPLINPFVDG APPLASLPCG RVLFCDFIPM F

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.