CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	OQU84317	AT4G10930.1	21798944
AT3G48690.1	OQU85411	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16153	Sorghum	cytosol	90.71	75.82
Zm00001d031805_P001	Maize	cytosol	62.5	64.58
KXG25323	Sorghum	cytosol	75.71	64.24
TraesCS5A01G437300.1	Wheat	cytosol	68.93	58.13
TraesCS5D01G444200.1	Wheat	cytosol	68.93	58.13
Os08t0475400-02	Rice	cytosol, plasma membrane	67.86	58.1
TraesCS5B01G439900.2	Wheat	cytosol	68.57	57.48
TraesCS5A01G450100.1	Wheat	cytosol	65.36	57.37
EER99019	Sorghum	cytosol	52.86	45.26
GSMUA_Achr7P18960_001	Banana	cytosol	50.0	43.21
EER96865	Sorghum	cytosol	46.79	40.06
VIT_03s0063g00790.t01	Wine grape	cytosol	41.07	38.21
PGSC0003DMT400066389	Potato	cytosol	39.64	38.01
CDY20870	Canola	cytosol	43.21	37.93
VIT_03s0063g00800.t01	Wine grape	cytosol	40.36	37.67
EER89413	Sorghum	cytosol	45.71	37.65
PGSC0003DMT400066384	Potato	cytosol	27.5	37.56
KRH50256	Soybean	cytosol	42.5	37.42
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	39.64	37.0
Bra040667.1-P	Field mustard	cytosol	42.14	36.99
Solyc01g108560.2.1	Tomato	cytosol, plastid	39.64	36.88
VIT_03s0063g00720.t01	Wine grape	cytosol	42.5	36.84
Solyc01g108570.2.1	Tomato	cytosol, extracellular	40.71	36.77
KXG35781	Sorghum	cytosol	41.07	36.74
CDY29339	Canola	cytosol	41.79	36.68
Bra025714.1-P	Field mustard	cytosol	31.07	36.55
VIT_03s0063g00820.t01	Wine grape	cytosol	39.29	36.54
VIT_03s0063g00700.t01	Wine grape	cytosol	42.14	36.53
VIT_03s0063g00750.t01	Wine grape	cytosol	42.14	36.53
EER88069	Sorghum	cytosol	43.21	36.34
PGSC0003DMT400091080	Potato	cytosol	40.36	36.22
CDY28094	Canola	cytosol	41.43	36.14
PGSC0003DMT400066392	Potato	cytosol	40.36	36.1
Solyc01g108540.2.1	Tomato	cytosol	39.64	35.92
Bra018807.1-P	Field mustard	cytosol	41.79	35.89
Bra025117.1-P	Field mustard	cytosol	38.93	35.86
KXG19591	Sorghum	cytosol	41.43	35.8
VIT_03s0063g00740.t01	Wine grape	cytosol	41.07	35.71
CDX77920	Canola	cytosol	39.64	35.58
PGSC0003DMT400066386	Potato	cytosol	39.64	35.58
KRH71161	Soybean	cytosol	34.64	35.53
KXG25394	Sorghum	cytosol	41.79	35.45
KRH71162	Soybean	cytosol, nucleus	42.14	35.44
VIT_03s0063g00830.t01	Wine grape	cytosol	38.21	35.43
CDY51035	Canola	cytosol	41.07	35.28
Solyc01g108580.2.1	Tomato	cytosol	39.29	35.26
OQU80639	Sorghum	cytosol	41.79	35.03
VIT_03s0063g00730.t01	Wine grape	cytosol	40.0	35.0
KXG35761	Sorghum	cytosol	40.71	34.97
AT1G19190.1	Thale cress	cytosol	39.64	34.91
OQU89622	Sorghum	cytosol	39.64	34.91
PGSC0003DMT400066385	Potato	cytosol	38.21	34.85
Bra018809.1-P	Field mustard	cytosol	39.29	34.81
CDY51033	Canola	cytosol	39.64	34.69
CDY67024	Canola	cytosol	40.0	34.67
Solyc01g108530.2.1	Tomato	cytosol	37.86	34.53
AT1G49660.1	Thale cress	cytosol	39.29	34.48
CDY28098	Canola	cytosol	39.64	34.47
KRH71163	Soybean	cytosol	37.14	34.44
EER88163	Sorghum	cytosol	38.93	34.38
CDY37916	Canola	cytosol	39.64	34.37
AT3G48700.1	Thale cress	cytosol	40.36	34.35
CDX83045	Canola	cytosol	39.64	34.26
VIT_03s0063g00810.t01	Wine grape	cytosol	38.21	34.19
Bra019558.1-P	Field mustard	cytosol	39.29	34.06
Bra029912.1-P	Field mustard	cytosol	39.29	34.06
CDY41024	Canola	peroxisome	39.29	34.06
Bra029913.1-P	Field mustard	cytosol	39.64	34.05
AT1G49640.1	Thale cress	cytosol	38.21	33.97
AT3G48690.1	Thale cress	cytosol	39.29	33.95
KRH50255	Soybean	cytosol	36.79	33.88
KRH71164	Soybean	cytosol	36.79	33.88
KXG35782	Sorghum	cytosol	40.71	33.83
CDX68486	Canola	cytosol	38.93	33.75
AT2G03550.1	Thale cress	cytosol	37.5	33.65
KXG35760	Sorghum	cytosol	38.57	33.33
PGSC0003DMT400066383	Potato	cytosol	36.07	33.22
KXG26418	Sorghum	cytosol	39.29	33.13
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	37.14	33.02
Solyc10g050880.1.1	Tomato	cytosol	36.79	33.01
KXG35780	Sorghum	extracellular, vacuole	41.43	32.77
PGSC0003DMT400088862	Potato	cytosol	40.0	32.56
EES15127	Sorghum	extracellular	43.57	32.53
OQU89623	Sorghum	mitochondrion	44.29	32.46
KRH50257	Soybean	cytosol	37.14	32.0
OQU85176	Sorghum	plastid	38.93	31.96
CDY51034	Canola	plastid	42.86	31.58
CDY28095	Canola	plastid	42.5	31.32
OQU81663	Sorghum	cytosol	39.64	31.18
CDX96674	Canola	cytosol	36.07	31.08
Bra018808.1-P	Field mustard	plastid	42.14	30.97
CDY02986	Canola	cytosol	38.93	30.88
OQU80637	Sorghum	plasma membrane	43.57	30.81
CDY16521	Canola	mitochondrion	41.79	30.79
Bra014213.1-P	Field mustard	mitochondrion	41.43	30.53
AT1G49650.1	Thale cress	mitochondrion	40.71	30.48
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	38.21	30.14
CDY32845	Canola	mitochondrion	39.29	30.05
Bra016519.1-P	Field mustard	cytosol	35.0	29.97
KRH71160	Soybean	nucleus	41.07	29.26
KXG35785	Sorghum	extracellular, golgi, vacuole	39.29	29.18
KXG35783	Sorghum	extracellular, vacuole	35.71	27.55
VIT_03s0063g00770.t01	Wine grape	plastid	39.29	26.44
EER97903	Sorghum	cytosol	37.14	22.96
OQU76051	Sorghum	golgi, plasma membrane, vacuole	38.21	22.06

Protein Annotations

EnsemblPlants:KXG21709	EnsemblPlantsGene:SORBI_3009G098200	Gene3D:3.40.50.1820	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:IPR029058	PANTHER:PTHR23024
PANTHER:PTHR23024:SF150	PFAM:PF07859	ProteinID:KXG21709	ProteinID:KXG21709.1	SEG:seg	SUPFAM:SSF53474
UniParc:UPI00081AC321	UniProt:A0A1B6P7K4	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:36186838..36187729

Molecular Weight (calculated)

30289.9 Da

IEP (calculated)

5.480

GRAVY (calculated)

0.071

Length

280 amino acids

Sequence
(BLAST)

001: MWIRSTGVIW GSSTSRDVVI SPNVSARLYL PRLGDGDGDA KLPILVYYQG GGFCIGSTFN PIFHAFTSLA TALVVSVEYR LAPEHPVPAA YADSWDALAW
101: VVSHSHLTSS STARDPWIAG HADFSRLYLG EESAGANIAH HMAMRAAATV EGGLAHGRAR IRGLVMVHPY FLGTDPVPSD DLSAETRESL ASLWRVMCPS
201: STAGDDDPLI NPLVDGALAL VSLACARMLV CVAEGDVLCD RGRAYYDRLR ASGWPGEAEF WQAPDRGHTF HFMDPCLEML

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.