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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025549_P001 Maize cytosol 79.82 82.3
TraesCS2D01G315300.1 Wheat cytosol 71.39 73.6
TraesCS2A01G317400.1 Wheat mitochondrion, plastid 71.39 66.95
OQU81663 Sorghum cytosol 69.28 64.61
TraesCS2B01G335600.1 Wheat plastid 72.29 64.0
OQU85176 Sorghum plastid 56.93 55.43
GSMUA_Achr3P06860_001 Banana cytosol 34.94 47.35
GSMUA_Achr6P04360_001 Banana cytosol 41.57 47.1
GSMUA_Achr6P04230_001 Banana cytosol 33.13 47.01
KXG35781 Sorghum cytosol 43.98 46.65
Solyc01g108570.2.1 Tomato cytosol, extracellular 42.17 45.16
Solyc01g108540.2.1 Tomato cytosol 41.87 44.98
OQU89622 Sorghum cytosol 42.77 44.65
EER88163 Sorghum cytosol 42.47 44.48
PGSC0003DMT400066392 Potato cytosol 41.87 44.41
GSMUA_Achr7P12950_001 Banana cytosol 43.07 44.27
PGSC0003DMT400066386 Potato cytosol 41.27 43.91
PGSC0003DMT400091080 Potato cytosol 40.96 43.59
EER99019 Sorghum cytosol 42.77 43.43
PGSC0003DMT400066384 Potato cytosol 26.81 43.41
EER96865 Sorghum cytosol 42.47 43.12
Solyc01g108560.2.1 Tomato cytosol, plastid 38.86 42.86
OQU80639 Sorghum cytosol 43.07 42.81
KRH50256 Soybean cytosol 40.66 42.45
KRH50255 Soybean cytosol 38.86 42.43
KRH71164 Soybean cytosol 38.86 42.43
VIT_03s0063g00720.t01 Wine grape cytosol 41.27 42.41
Solyc01g108580.2.1 Tomato cytosol 39.76 42.31
CDX77920 Canola cytosol 39.46 41.99
KXG25394 Sorghum cytosol 41.57 41.82
VIT_03s0063g00700.t01 Wine grape cytosol 40.66 41.8
EER88069 Sorghum cytosol 41.87 41.74
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 37.65 41.67
OQU89623 Sorghum mitochondrion 47.89 41.62
CDX83045 Canola cytosol 40.36 41.36
KXG35782 Sorghum cytosol 41.87 41.25
KRH71162 Soybean cytosol, nucleus 41.27 41.14
Bra029913.1-P Field mustard cytosol 40.36 41.1
Bra019558.1-P Field mustard cytosol 39.76 40.87
CDX68486 Canola cytosol 39.76 40.87
CDY37916 Canola cytosol 39.76 40.87
VIT_03s0063g00750.t01 Wine grape cytosol 39.76 40.87
VIT_03s0063g00820.t01 Wine grape cytosol 37.05 40.86
AT3G48690.1 Thale cress cytosol 39.76 40.74
KXG19591 Sorghum cytosol 39.76 40.74
KXG35760 Sorghum cytosol 39.76 40.74
PGSC0003DMT400066385 Potato cytosol 37.65 40.72
PGSC0003DMT400088862 Potato cytosol 42.17 40.7
AT3G48700.1 Thale cress cytosol 40.06 40.43
PGSC0003DMT400066389 Potato cytosol 35.54 40.41
Solyc10g050880.1.1 Tomato cytosol 37.95 40.38
KRH71161 Soybean cytosol 33.13 40.29
CDY67024 Canola cytosol 39.16 40.25
KXG35761 Sorghum cytosol 39.46 40.18
Bra025117.1-P Field mustard cytosol 36.75 40.13
KRH71163 Soybean cytosol 36.45 40.07
KXG25323 Sorghum cytosol 39.76 40.0
VIT_03s0063g00730.t01 Wine grape cytosol 38.55 40.0
VIT_03s0063g00740.t01 Wine grape cytosol 38.55 39.75
Solyc01g108530.2.1 Tomato cytosol 36.75 39.74
EER89413 Sorghum cytosol 40.66 39.71
Bra029912.1-P Field mustard cytosol 38.55 39.63
VIT_03s0063g00830.t01 Wine grape cytosol 35.84 39.4
VIT_03s0063g00810.t01 Wine grape cytosol 37.05 39.3
KXG21709 Sorghum cytosol, mitochondrion, plastid 33.13 39.29
EES16153 Sorghum cytosol 39.46 39.1
AT2G03550.1 Thale cress cytosol 36.75 39.1
VIT_03s0063g00790.t01 Wine grape cytosol 35.24 38.87
VIT_03s0063g00800.t01 Wine grape cytosol 34.94 38.67
CDY41024 Canola peroxisome 37.05 38.08
Bra018807.1-P Field mustard cytosol 37.35 38.04
CDY51035 Canola cytosol 37.35 38.04
CDY20870 Canola cytosol 36.45 37.93
AT1G19190.1 Thale cress cytosol 35.84 37.42
CDY28094 Canola cytosol 36.14 37.38
KRH50257 Soybean cytosol 36.45 37.23
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 35.24 37.14
AT1G49660.1 Thale cress cytosol 35.54 36.99
Bra040667.1-P Field mustard cytosol 35.24 36.68
CDY29339 Canola cytosol 35.24 36.68
KXG35783 Sorghum extracellular, vacuole 40.06 36.64
KXG35780 Sorghum extracellular, vacuole 38.86 36.44
CDY28098 Canola cytosol 35.24 36.34
CDX96674 Canola cytosol 35.24 36.0
AT1G49640.1 Thale cress cytosol 34.04 35.87
Bra016519.1-P Field mustard cytosol 35.24 35.78
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 38.25 35.77
Bra025714.1-P Field mustard cytosol 25.6 35.71
CDY51033 Canola cytosol 34.04 35.31
EES15127 Sorghum extracellular 39.46 34.93
PGSC0003DMT400066383 Potato cytosol 31.93 34.87
Bra018809.1-P Field mustard cytosol 33.13 34.81
CDY02986 Canola cytosol 36.75 34.56
KRH71160 Soybean nucleus 40.36 34.1
OQU80637 Sorghum plasma membrane 39.46 33.08
CDY16521 Canola mitochondrion 37.05 32.37
KXG35785 Sorghum extracellular, golgi, vacuole 36.75 32.36
AT1G49650.1 Thale cress mitochondrion 36.45 32.35
Bra014213.1-P Field mustard mitochondrion 36.75 32.11
CDY51034 Canola plastid 35.84 31.32
Bra018808.1-P Field mustard plastid 35.84 31.23
CDY32845 Canola mitochondrion 34.34 31.15
CDY28095 Canola plastid 34.94 30.53
OQU76051 Sorghum golgi, plasma membrane, vacuole 41.87 28.66
VIT_03s0063g00770.t01 Wine grape plastid 35.24 28.12
EER97903 Sorghum cytosol 38.25 28.04
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 40.06 21.59
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1UniProt:A0A1B6PL78InterPro:AB_hydrolaseInterPro:AB_hydrolase_3GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:IPR029058EnsemblPlants:KXG26418
ProteinID:KXG26418ProteinID:KXG26418.1InterPro:Lipase_GDXG_HIS_ASInterPro:Lipase_GDXG_put_SER_ASPFAM:PF07859ScanProsite:PS01173
ScanProsite:PS01174PANTHER:PTHR23024PANTHER:PTHR23024:SF180EnsemblPlantsGene:SORBI_3006G098300SUPFAM:SSF53474UniParc:UPI0003C6AC7D
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:46785398..46786396
Molecular Weight (calculated)
35284.1 Da
IEP (calculated)
6.372
GRAVY (calculated)
-0.042
Length
332 amino acids
Sequence
(BLAST)
001: MSSATTTAGA GDDDGDEVVH DFAPLLLVYK SGRLERPLAM PQVPPGRDAA TGVVSKDVAL SPHTFVRLYL PPAAAVAERE RKLLPVVVYF HGGGFVIGSA
101: GSAAYHRCLN DLAAACPAVA VSVDYRLAPE HPVPAAYEDS LAALKWALSS LSSSSSAAEA DPWLAAHGDP ARVFLAGDSA GANICHHLAM HRDIRDAGGL
201: KGVVLIHPWF WGKDPIGGEP RSPSKQKEQQ KGLWEFVCPG AVDGVDDPRM NPTAPGALGL ENLACRKVMV CVAEGDVLRW RGKLYAEAAA RAKKDVELFE
301: SHGVGHVFYL LEPAKEKAKE LLDRIAAFVS TE
Best Arabidopsis Sequence Match ( AT3G48700.1 )
(BLAST)
001: MDSEIAADYS PMLIIYKSGR IERLVGETTV PPSSNPQNGV VSKDVVYSPD NNLSLRIYLP EKAATAETEA SVKLPLLVYF HGGGFLVETA FSPTYHTFLT
101: AAVSASDCVA VSVDYRRAPE HPIPTSYDDS WTALKWVFSH IAGSGSEDWL NKHADFSKVF LAGDSAGANI THHMTMKAAK DKLSPESLNE SGISGIILVH
201: PYFWSKTPVD DKETTDVAIR TWIESVWTLA SPNSKDGSDD PFINVVQSES VDLSGLGCGK VLVMVAEKDA LVRQGWGYWE KLGKSRWNGE VLDVVETKGE
301: GHVFHLRDPN SEKAHELVHR FAGFIKGDK
Arabidopsis Description
CXE13Probable carboxylesterase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.