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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG35782 Sorghum cytosol 72.39 70.03
KXG35760 Sorghum cytosol 66.87 67.28
HORVU5Hr1G068140.1 Barley cytosol 65.34 65.74
Os09t0455500-01 Rice cytosol 64.42 65.62
Os09t0455900-01 Rice cytosol, plasma membrane 63.5 64.89
TraesCS5B01G235400.1 Wheat cytosol 64.42 64.81
TraesCS5D01G244200.1 Wheat cytosol 63.8 64.2
KXG35781 Sorghum cytosol 50.61 52.72
GSMUA_Achr3P06860_001 Banana cytosol 36.2 48.16
GSMUA_Achr6P04230_001 Banana cytosol 34.36 47.86
EER88163 Sorghum cytosol 46.32 47.63
GSMUA_Achr6P04360_001 Banana cytosol 42.33 47.1
OQU89622 Sorghum cytosol 45.4 46.54
EER99019 Sorghum cytosol 46.63 46.48
KXG19591 Sorghum cytosol 44.48 44.75
PGSC0003DMT400066384 Potato cytosol 26.99 42.93
KXG25394 Sorghum cytosol 42.94 42.42
VIT_03s0063g00830.t01 Wine grape cytosol 38.65 41.72
VIT_03s0063g00720.t01 Wine grape cytosol 41.1 41.49
VIT_03s0063g00750.t01 Wine grape cytosol 41.1 41.49
EES16153 Sorghum cytosol 42.33 41.19
VIT_03s0063g00700.t01 Wine grape cytosol 40.8 41.18
OQU80639 Sorghum cytosol 42.02 41.02
EER88069 Sorghum cytosol 41.72 40.84
OQU89623 Sorghum mitochondrion 47.85 40.84
KXG21709 Sorghum cytosol, mitochondrion, plastid 34.97 40.71
EER89413 Sorghum cytosol 42.33 40.59
KRH71164 Soybean cytosol 37.73 40.46
EER96865 Sorghum cytosol 40.49 40.37
KRH50256 Soybean cytosol 39.26 40.25
VIT_03s0063g00820.t01 Wine grape cytosol 37.12 40.2
KRH50255 Soybean cytosol 37.12 39.8
KXG25323 Sorghum cytosol 40.18 39.7
VIT_03s0063g00730.t01 Wine grape cytosol 38.96 39.69
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.5 39.67
KXG26418 Sorghum cytosol 40.18 39.46
VIT_03s0063g00740.t01 Wine grape cytosol 38.96 39.44
OQU81663 Sorghum cytosol 42.64 39.04
KRH71161 Soybean cytosol 32.52 38.83
KXG35780 Sorghum extracellular, vacuole 42.02 38.7
VIT_03s0063g00800.t01 Wine grape cytosol 35.28 38.33
OQU85176 Sorghum plastid 39.88 38.12
VIT_03s0063g00790.t01 Wine grape cytosol 34.97 37.87
GSMUA_Achr7P12950_001 Banana cytosol 37.42 37.77
KXG35783 Sorghum extracellular, vacuole 42.02 37.74
Solyc01g108560.2.1 Tomato cytosol, plastid 34.66 37.54
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 40.8 37.46
PGSC0003DMT400066389 Potato cytosol 33.44 37.33
KRH71162 Soybean cytosol, nucleus 38.04 37.24
PGSC0003DMT400066385 Potato cytosol 34.97 37.13
Solyc01g108530.2.1 Tomato cytosol 34.97 37.13
KRH71163 Soybean cytosol 34.36 37.09
EES15127 Sorghum extracellular 42.64 37.07
PGSC0003DMT400091080 Potato cytosol 35.28 36.86
Solyc01g108580.2.1 Tomato cytosol 35.28 36.86
Solyc01g108570.2.1 Tomato cytosol, extracellular 34.97 36.77
Solyc01g108540.2.1 Tomato cytosol 34.66 36.57
PGSC0003DMT400066386 Potato cytosol 34.97 36.54
Solyc10g050880.1.1 Tomato cytosol 34.97 36.54
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 35.28 36.51
PGSC0003DMT400066383 Potato cytosol 33.74 36.18
VIT_03s0063g00810.t01 Wine grape cytosol 34.66 36.1
PGSC0003DMT400066392 Potato cytosol 34.36 35.78
CDY51033 Canola cytosol 34.66 35.31
CDX77920 Canola cytosol 33.74 35.26
CDY28094 Canola cytosol 34.66 35.2
CDY28098 Canola cytosol 34.66 35.09
KXG35785 Sorghum extracellular, golgi, vacuole 40.49 35.01
AT1G19190.1 Thale cress cytosol 34.05 34.91
Bra018809.1-P Field mustard cytosol 33.74 34.81
Bra019558.1-P Field mustard cytosol 34.36 34.67
AT1G49660.1 Thale cress cytosol 33.74 34.48
CDY29339 Canola cytosol 33.74 34.48
CDY37916 Canola cytosol 34.05 34.37
AT3G48700.1 Thale cress cytosol 34.66 34.35
AT3G48690.1 Thale cress cytosol 34.05 34.26
Bra040667.1-P Field mustard cytosol 33.44 34.17
OQU80637 Sorghum plasma membrane 41.41 34.09
CDX83045 Canola cytosol 33.74 33.95
CDY20870 Canola cytosol 33.13 33.86
CDX68486 Canola cytosol 33.44 33.75
Bra018807.1-P Field mustard cytosol 33.74 33.74
Bra029913.1-P Field mustard cytosol 33.74 33.74
CDY51035 Canola cytosol 33.44 33.44
PGSC0003DMT400088862 Potato cytosol 35.28 33.43
AT1G49640.1 Thale cress cytosol 32.21 33.33
AT2G03550.1 Thale cress cytosol 31.6 33.01
CDY41024 Canola peroxisome 32.52 32.82
Bra025117.1-P Field mustard cytosol 30.06 32.24
CDX96674 Canola cytosol 31.9 32.0
Bra025714.1-P Field mustard cytosol 23.31 31.93
Bra029912.1-P Field mustard cytosol 31.6 31.89
KRH50257 Soybean cytosol 31.6 31.69
CDY67024 Canola cytosol 31.29 31.58
Bra016519.1-P Field mustard cytosol 31.29 31.19
KRH71160 Soybean nucleus 35.89 29.77
OQU76051 Sorghum golgi, plasma membrane, vacuole 44.17 29.69
CDY51034 Canola plastid 34.36 29.47
Bra018808.1-P Field mustard plastid 34.36 29.4
CDY16521 Canola mitochondrion 34.05 29.21
Bra014213.1-P Field mustard mitochondrion 33.74 28.95
VIT_03s0063g00770.t01 Wine grape plastid 36.81 28.85
CDY28095 Canola plastid 33.44 28.68
AT1G49650.1 Thale cress mitochondrion 32.82 28.61
CDY02986 Canola cytosol 30.37 28.05
CDY32845 Canola mitochondrion 31.29 27.87
EER97903 Sorghum cytosol 36.5 26.27
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 36.2 19.16
Protein Annotations
EnsemblPlants:KXG35761EnsemblPlantsGene:SORBI_3002G224900Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF192PFAM:PF07859ProteinID:KXG35761ProteinID:KXG35761.1SEG:segSUPFAM:SSF53474
UniParc:UPI0003C6BDC6UniProt:A0A1B6QCY2MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr2:-:61653660..61655006
Molecular Weight (calculated)
34598.7 Da
IEP (calculated)
5.744
GRAVY (calculated)
-0.018
Length
326 amino acids
Sequence
(BLAST)
001: MDSGSAEVIF ESHYFRLFSD GHVERTGGMD TVPAGFDADT GVTSKDVVID AATGVAARLY LPSIQTVRTP SGSDGGCTTK KLPILVVFHG GFFILGSSRD
101: PNFHRYMNWL VASARVVAVS VDYRLAPEHP LPAAYDDSWA ALNWAVSGAA DPWLSDHGDL GRVFVAGASA GANIAHNVAV AAAGMNGLQA APRIEGVILL
201: HPSFCGEQRM EDEAEEFLEA NKKRWAVIFP GASNGSDDPR INPMAASVGA PGLARLAGKK LFVSTASEDA RAPRGRAYCD AVRTGGWTGK LQWFESEGKG
301: HCFFVHDYGS HEAVALMDQV VAFIAG
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.