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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031804_P001 Maize cytosol 87.13 88.72
TraesCS4B01G331200.1 Wheat cytosol 67.37 69.88
TraesCS4D01G328100.1 Wheat cytosol 67.37 69.88
TraesCS5A01G502600.1 Wheat cytosol 66.47 69.38
GSMUA_Achr3P06860_001 Banana cytosol 35.93 48.98
GSMUA_Achr6P04360_001 Banana cytosol 41.92 47.78
GSMUA_Achr6P04230_001 Banana cytosol 32.34 46.15
OQU85176 Sorghum plastid 46.41 45.45
EER99019 Sorghum cytosol 44.31 45.26
KXG19591 Sorghum cytosol 43.41 44.75
EER88069 Sorghum cytosol 44.01 44.14
OQU89622 Sorghum cytosol 41.92 44.03
KXG35781 Sorghum cytosol 41.02 43.77
GSMUA_Achr7P12950_001 Banana cytosol 42.22 43.65
EER96865 Sorghum cytosol 42.52 43.43
EER89413 Sorghum cytosol 44.01 43.24
KXG26418 Sorghum cytosol 42.81 43.07
EES16153 Sorghum cytosol 42.52 42.39
KXG35760 Sorghum cytosol 41.02 42.28
KXG35761 Sorghum cytosol 41.02 42.02
KXG35782 Sorghum cytosol 42.22 41.84
KXG21709 Sorghum cytosol, mitochondrion, plastid 35.03 41.79
EER88163 Sorghum cytosol 39.52 41.64
KXG25323 Sorghum cytosol 41.02 41.52
VIT_03s0063g00700.t01 Wine grape cytosol 40.12 41.49
VIT_03s0063g00720.t01 Wine grape cytosol 40.12 41.49
KXG35780 Sorghum extracellular, vacuole 43.71 41.24
VIT_03s0063g00790.t01 Wine grape cytosol 37.13 41.2
VIT_03s0063g00730.t01 Wine grape cytosol 39.22 40.94
KRH71164 Soybean cytosol 37.13 40.79
VIT_03s0063g00830.t01 Wine grape cytosol 36.83 40.73
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.53 40.67
PGSC0003DMT400066384 Potato cytosol 24.85 40.49
OQU89623 Sorghum mitochondrion 46.11 40.31
VIT_03s0063g00820.t01 Wine grape cytosol 36.23 40.2
KRH50255 Soybean cytosol 36.53 40.13
VIT_03s0063g00740.t01 Wine grape cytosol 38.62 40.06
KXG25394 Sorghum cytosol 39.52 40.0
VIT_03s0063g00800.t01 Wine grape cytosol 35.93 40.0
KRH71163 Soybean cytosol 35.93 39.74
KRH50256 Soybean cytosol 37.72 39.62
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 41.92 39.44
AT2G03550.1 Thale cress cytosol 36.53 39.1
PGSC0003DMT400066385 Potato cytosol 35.63 38.76
VIT_03s0063g00750.t01 Wine grape cytosol 37.43 38.7
KXG35783 Sorghum extracellular, vacuole 41.92 38.57
PGSC0003DMT400066386 Potato cytosol 35.93 38.46
Solyc01g108530.2.1 Tomato cytosol 35.33 38.44
CDY41024 Canola peroxisome 37.13 38.39
Solyc01g108540.2.1 Tomato cytosol 35.33 38.19
Solyc10g050880.1.1 Tomato cytosol 35.63 38.14
PGSC0003DMT400091080 Potato cytosol 35.33 37.82
Bra019558.1-P Field mustard cytosol 36.53 37.77
CDY37916 Canola cytosol 36.53 37.77
VIT_03s0063g00810.t01 Wine grape cytosol 35.33 37.7
EES15127 Sorghum extracellular 42.22 37.6
CDX77920 Canola cytosol 35.03 37.5
Bra025714.1-P Field mustard cytosol 26.65 37.4
CDY28094 Canola cytosol 35.93 37.38
Solyc01g108560.2.1 Tomato cytosol, plastid 33.53 37.21
Solyc01g108570.2.1 Tomato cytosol, extracellular 34.43 37.1
OQU81663 Sorghum cytosol 39.52 37.08
PGSC0003DMT400066392 Potato cytosol 34.73 37.06
AT3G48690.1 Thale cress cytosol 35.93 37.04
Bra018807.1-P Field mustard cytosol 35.93 36.81
KRH71162 Soybean cytosol, nucleus 36.53 36.64
KRH71161 Soybean cytosol 29.94 36.63
Solyc01g108580.2.1 Tomato cytosol 34.13 36.54
CDY51035 Canola cytosol 35.63 36.5
AT3G48700.1 Thale cress cytosol 35.93 36.47
PGSC0003DMT400066389 Potato cytosol 31.74 36.3
OQU80637 Sorghum plasma membrane 42.81 36.11
Bra016519.1-P Field mustard cytosol 35.33 36.09
CDY28098 Canola cytosol 34.73 36.02
Bra025117.1-P Field mustard cytosol 32.63 35.86
CDX83045 Canola cytosol 34.73 35.8
Bra040667.1-P Field mustard cytosol 34.13 35.74
CDX96674 Canola cytosol 34.73 35.69
Bra029913.1-P Field mustard cytosol 34.73 35.58
AT1G49660.1 Thale cress cytosol 33.83 35.42
CDY20870 Canola cytosol 33.83 35.42
CDY29339 Canola cytosol 33.83 35.42
CDX68486 Canola cytosol 33.83 34.98
CDY67024 Canola cytosol 33.83 34.98
AT1G49640.1 Thale cress cytosol 32.93 34.92
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 32.93 34.92
CDY51033 Canola cytosol 33.23 34.69
Bra029912.1-P Field mustard cytosol 33.53 34.67
AT1G19190.1 Thale cress cytosol 32.93 34.59
KXG35785 Sorghum extracellular, golgi, vacuole 38.62 34.22
PGSC0003DMT400066383 Potato cytosol 31.14 34.21
Bra018809.1-P Field mustard cytosol 32.34 34.18
PGSC0003DMT400088862 Potato cytosol 35.03 34.01
KRH50257 Soybean cytosol 32.34 33.23
CDY51034 Canola plastid 35.63 31.32
Bra018808.1-P Field mustard plastid 35.63 31.23
CDY02986 Canola cytosol 32.93 31.16
Bra014213.1-P Field mustard mitochondrion 35.33 31.05
CDY16521 Canola mitochondrion 35.33 31.05
KRH71160 Soybean nucleus 35.63 30.28
CDY28095 Canola plastid 34.43 30.26
CDY32845 Canola mitochondrion 32.63 29.78
VIT_03s0063g00770.t01 Wine grape plastid 36.83 29.57
AT1G49650.1 Thale cress mitochondrion 32.63 29.14
OQU76051 Sorghum golgi, plasma membrane, vacuole 41.92 28.87
EER97903 Sorghum cytosol 36.23 26.71
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 36.23 19.64
Protein Annotations
EnsemblPlants:OQU80639EnsemblPlantsGene:SORBI_3007G157800Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF178PFAM:PF07859ProteinID:OQU80639ProteinID:OQU80639.1SEG:segSUPFAM:SSF53474
UniParc:UPI000B4239B3UniProt:A0A1Z5RAP3MapMan:35.1:::
Description
hypothetical protein
Coordinates
chr7:+:59196668..59197672
Molecular Weight (calculated)
35564.3 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.003
Length
334 amino acids
Sequence
(BLAST)
001: MDPDAEVTFE FAPVIRQYKS GRVERLLPVN PVPPSVDAAT GVASKDVTLD PATGLWARLY LPVSARHPGG DSDRRRRRLP IVLYFHGGGL VVGSAADAPE
101: HAFMNRLAAR AGALAVSVEY RLAPEHPVPA CYDDAWAALR LVVTPAPAAD PWVRDHGDVA RVFVLGFSAG ANLAHNLTLR AGSEPDVLPR GARVLGMALL
201: HPFFLSPPPP AAAAGDEVAN YAWVRAKLAE MWEFACGEGR TAAGPDDPRV NPLADGAPSL RRLGCGRVLV CLADDALVAE GKAYYEALLA SGWDAADAEL
301: LDSAPADHEF HLREPDSDKA VLLMDRLVAR ITGS
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.