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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d005909_P001 Maize plasma membrane 93.11 93.63
Os09t0461900-01 Rice cytosol, plasma membrane 71.07 80.37
TraesCS5B01G240800.1 Wheat extracellular, golgi 75.48 74.46
TraesCS2D01G389600.1 Wheat cytosol 66.39 74.38
TraesCS4B01G135300.1 Wheat cytosol 65.29 73.83
HORVU2Hr1G093140.1 Barley cytosol 65.84 73.77
TraesCS5B01G240000.1 Wheat cytosol 65.01 73.06
TraesCS5A01G242800.1 Wheat extracellular, plasma membrane 74.1 72.7
TraesCS5D01G249400.1 Wheat endoplasmic reticulum, plasma membrane 74.38 72.19
TraesCS5A01G242600.1 Wheat cytosol 63.91 71.6
TraesCS2D01G389500.1 Wheat cytosol 58.68 70.53
TraesCS2B01G409800.1 Wheat cytosol 62.81 68.47
TraesCS4D01G130000.1 Wheat extracellular, vacuole 67.49 65.86
HORVU0Hr1G013160.1 Barley cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 45.18 63.08
TraesCS4A01G183300.2 Wheat extracellular, golgi 68.59 59.86
HORVU0Hr1G013200.3 Barley plastid 57.02 55.35
GSMUA_Achr6P04360_001 Banana cytosol 39.67 49.15
GSMUA_Achr6P04230_001 Banana cytosol 30.58 47.44
GSMUA_Achr7P12950_001 Banana cytosol 42.15 47.37
GSMUA_Achr3P06860_001 Banana cytosol 31.68 46.94
KXG35781 Sorghum cytosol 39.12 45.37
VIT_03s0063g00750.t01 Wine grape cytosol 39.12 43.96
KXG35782 Sorghum cytosol 40.77 43.92
KXG25394 Sorghum cytosol 39.67 43.64
KXG35780 Sorghum extracellular, vacuole 42.42 43.5
VIT_03s0063g00740.t01 Wine grape cytosol 38.57 43.48
KRH50255 Soybean cytosol 36.36 43.42
KRH71164 Soybean cytosol 36.36 43.42
OQU85176 Sorghum plastid 40.5 43.11
EER88163 Sorghum cytosol 37.47 42.9
EER99019 Sorghum cytosol 38.57 42.81
KRH50256 Soybean cytosol 37.47 42.77
KXG35760 Sorghum cytosol 38.02 42.59
KRH71161 Soybean cytosol 31.96 42.49
OQU89622 Sorghum cytosol 36.91 42.14
KXG35761 Sorghum cytosol 37.74 42.02
KXG19591 Sorghum cytosol 37.47 41.98
OQU80639 Sorghum cytosol 38.57 41.92
EES15127 Sorghum extracellular 42.98 41.6
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 40.5 41.41
Solyc01g108570.2.1 Tomato cytosol, extracellular 35.26 41.29
PGSC0003DMT400066392 Potato cytosol 35.54 41.21
VIT_03s0063g00820.t01 Wine grape cytosol 34.16 41.2
AT2G03550.1 Thale cress cytosol 35.26 41.03
PGSC0003DMT400066386 Potato cytosol 35.26 41.03
PGSC0003DMT400091080 Potato cytosol 35.26 41.03
PGSC0003DMT400066384 Potato cytosol 23.14 40.98
Solyc01g108560.2.1 Tomato cytosol, plastid 33.88 40.86
KXG35785 Sorghum extracellular, golgi, vacuole 42.42 40.85
Solyc01g108540.2.1 Tomato cytosol 34.71 40.78
EER96865 Sorghum cytosol 36.64 40.67
VIT_03s0063g00730.t01 Wine grape cytosol 35.81 40.62
EER88069 Sorghum cytosol 37.19 40.54
Bra025117.1-P Field mustard cytosol 33.88 40.46
OQU80637 Sorghum plasma membrane 44.08 40.4
PGSC0003DMT400066389 Potato cytosol 32.23 40.07
Solyc01g108580.2.1 Tomato cytosol 34.44 40.06
KXG26418 Sorghum cytosol 36.64 40.06
VIT_03s0063g00800.t01 Wine grape cytosol 33.06 40.0
AT3G48690.1 Thale cress cytosol 35.54 39.81
VIT_03s0063g00700.t01 Wine grape cytosol 35.26 39.63
VIT_03s0063g00720.t01 Wine grape cytosol 35.26 39.63
VIT_03s0063g00830.t01 Wine grape cytosol 32.78 39.4
KRH71162 Soybean cytosol, nucleus 36.09 39.34
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 32.51 39.33
EER89413 Sorghum cytosol 36.64 39.12
CDX77920 Canola cytosol 33.61 39.1
PGSC0003DMT400066385 Potato cytosol 32.78 38.76
Solyc01g108530.2.1 Tomato cytosol 32.78 38.76
VIT_03s0063g00810.t01 Wine grape cytosol 33.33 38.66
AT3G48700.1 Thale cress cytosol 34.71 38.3
CDY28094 Canola cytosol 33.61 38.01
Bra040667.1-P Field mustard cytosol 33.33 37.93
KXG25323 Sorghum cytosol 34.44 37.88
CDY37916 Canola cytosol 33.61 37.77
Bra018807.1-P Field mustard cytosol 33.88 37.73
CDY29339 Canola cytosol 33.06 37.62
EES16153 Sorghum cytosol 34.71 37.61
VIT_03s0063g00790.t01 Wine grape cytosol 31.13 37.54
Bra019558.1-P Field mustard cytosol 33.33 37.46
CDY67024 Canola cytosol 33.33 37.46
CDY51035 Canola cytosol 33.61 37.42
AT1G49660.1 Thale cress cytosol 32.78 37.3
CDY20870 Canola cytosol 32.78 37.3
CDX96674 Canola cytosol 33.33 37.23
OQU89623 Sorghum mitochondrion 39.12 37.17
CDX83045 Canola cytosol 33.06 37.04
KRH50257 Soybean cytosol 33.06 36.92
Bra029912.1-P Field mustard cytosol 32.78 36.84
CDY41024 Canola peroxisome 32.78 36.84
Bra029913.1-P Field mustard cytosol 33.06 36.81
KRH71163 Soybean cytosol 30.58 36.76
Bra016519.1-P Field mustard cytosol 33.06 36.7
CDX68486 Canola cytosol 32.51 36.53
AT1G19190.1 Thale cress cytosol 31.96 36.48
CDY28098 Canola cytosol 32.23 36.34
CDY51033 Canola cytosol 31.96 36.25
PGSC0003DMT400088862 Potato cytosol 34.16 36.05
KXG21709 Sorghum cytosol, mitochondrion, plastid 27.55 35.71
OQU81663 Sorghum cytosol 34.99 35.67
AT1G49640.1 Thale cress cytosol 30.85 35.56
Bra018809.1-P Field mustard cytosol 30.85 35.44
CDY02986 Canola cytosol 34.44 35.41
Solyc10g050880.1.1 Tomato cytosol 30.3 35.26
Bra025714.1-P Field mustard cytosol 22.86 34.87
OQU76051 Sorghum golgi, plasma membrane, vacuole 46.56 34.85
KRH71160 Soybean nucleus 37.47 34.61
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 29.48 33.97
CDY16521 Canola mitochondrion 35.54 33.95
Bra014213.1-P Field mustard mitochondrion 35.26 33.68
CDY28095 Canola plastid 34.99 33.42
Bra018808.1-P Field mustard plastid 34.99 33.33
CDY32845 Canola mitochondrion 33.61 33.33
CDY51034 Canola plastid 34.16 32.63
AT1G49650.1 Thale cress mitochondrion 33.33 32.35
PGSC0003DMT400066383 Potato cytosol 26.45 31.58
VIT_03s0063g00770.t01 Wine grape plastid 34.71 30.29
EER97903 Sorghum cytosol 35.54 28.48
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 35.54 20.94
Protein Annotations
EnsemblPlants:KXG35783EnsemblPlantsGene:SORBI_3002G228200Gene3D:3.40.50.1820GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016787InterPro:AB_hydrolaseInterPro:AB_hydrolase_3InterPro:IPR029058PANTHER:PTHR23024
PANTHER:PTHR23024:SF171PFAM:PF07859ProteinID:KXG35783ProteinID:KXG35783.1SEG:segSUPFAM:SSF53474
TMHMM:TMhelixUniParc:UPI0003C6A1F8UniProt:A0A1B6QCY7MapMan:35.1::
Description
hypothetical protein
Coordinates
chr2:-:61978188..61980567
Molecular Weight (calculated)
39278.0 Da
IEP (calculated)
5.754
GRAVY (calculated)
0.039
Length
363 amino acids
Sequence
(BLAST)
001: MPKLSCRVLC AAILIASLAA LLFRFPIHRL LSPHAAMDPD SELEFEMPGV LRVYKTGRVE RFDGTETVPP SPDGDPANGV ASKDVVLDAA AGIYARLYLP
101: AGVDPGKKLP VVVFFHGGAF MVHTPASPLY HIYSASLAAA APAVVVSVDY RLAPEHRIPA AYDDAFAALK AVVAACRADG AEAEAEAEPW LAAHGDASRI
201: VLAGDSAGGN MAHNVAIRLR KEGGIVGYGD TVSGVVLLHP YFWGKEPLGA EPTDPGYRAM FDPTWEFICA GKFGLDHPYI NPMASPEEWR QLGSRRVLVT
301: TADQCWFVER ARAYAEGIKK CGWEGELEFY ETKDEAHVFF LPKHGSDNAV KELAVVAEFI RRC
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.