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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d020736_P001 Maize endoplasmic reticulum, vacuole 90.68 92.77
TraesCS5D01G248700.1 Wheat endoplasmic reticulum, vacuole 81.92 84.06
TraesCS5B01G240200.1 Wheat endoplasmic reticulum, vacuole 81.07 83.43
Os09t0461500-01 Rice golgi, mitochondrion 81.64 83.05
HORVU5Hr1G069040.1 Barley endoplasmic reticulum, vacuole 80.79 82.66
TraesCS5A01G242300.1 Wheat extracellular, golgi 80.51 82.13
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 59.32 59.15
GSMUA_Achr6P04360_001 Banana cytosol 43.79 52.9
KXG35785 Sorghum extracellular, golgi, vacuole 55.93 52.52
KXG25394 Sorghum cytosol 47.74 51.21
EES15127 Sorghum extracellular 54.24 51.2
GSMUA_Achr6P04230_001 Banana cytosol 33.62 50.85
GSMUA_Achr3P06860_001 Banana cytosol 34.46 49.8
GSMUA_Achr7P12950_001 Banana cytosol 44.92 49.23
OQU80637 Sorghum plasma membrane 54.52 48.74
KXG19591 Sorghum cytosol 43.5 47.53
EER99019 Sorghum cytosol 42.09 45.57
KXG35781 Sorghum cytosol 40.11 45.37
KXG25323 Sorghum cytosol 41.81 44.85
VIT_03s0063g00700.t01 Wine grape cytosol 40.11 43.96
VIT_03s0063g00720.t01 Wine grape cytosol 40.11 43.96
PGSC0003DMT400066384 Potato cytosol 25.42 43.9
OQU80639 Sorghum cytosol 41.24 43.71
EES16153 Sorghum cytosol 40.96 43.28
EER88163 Sorghum cytosol 38.42 42.9
KXG35760 Sorghum cytosol 39.27 42.9
KXG35782 Sorghum cytosol 40.68 42.73
KXG35783 Sorghum extracellular, vacuole 43.5 42.42
Solyc01g108570.2.1 Tomato cytosol, extracellular 37.01 42.26
VIT_03s0063g00730.t01 Wine grape cytosol 38.14 42.19
OQU89622 Sorghum cytosol 37.85 42.14
EER89413 Sorghum cytosol 40.4 42.06
KXG35761 Sorghum cytosol 38.7 42.02
Solyc01g108560.2.1 Tomato cytosol, plastid 35.59 41.86
PGSC0003DMT400066389 Potato cytosol 34.46 41.78
KRH50255 Soybean cytosol 35.88 41.78
KRH71164 Soybean cytosol 35.88 41.78
VIT_03s0063g00750.t01 Wine grape cytosol 37.85 41.49
EER88069 Sorghum cytosol 38.98 41.44
KXG21709 Sorghum cytosol, mitochondrion, plastid 32.77 41.43
Solyc01g108540.2.1 Tomato cytosol 36.16 41.42
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 35.03 41.33
PGSC0003DMT400066392 Potato cytosol 36.44 41.21
VIT_03s0063g00810.t01 Wine grape cytosol 36.44 41.21
VIT_03s0063g00820.t01 Wine grape cytosol 35.03 41.2
CDX77920 Canola cytosol 36.16 41.03
PGSC0003DMT400066386 Potato cytosol 35.88 40.71
PGSC0003DMT400091080 Potato cytosol 35.88 40.71
KRH50256 Soybean cytosol 36.44 40.57
OQU85176 Sorghum plastid 38.98 40.47
PGSC0003DMT400066385 Potato cytosol 35.03 40.39
EER96865 Sorghum cytosol 37.29 40.37
VIT_03s0063g00800.t01 Wine grape cytosol 34.18 40.33
Solyc01g108530.2.1 Tomato cytosol 34.75 40.07
CDY37916 Canola cytosol 36.16 39.63
Bra019558.1-P Field mustard cytosol 35.88 39.32
Solyc01g108580.2.1 Tomato cytosol 34.46 39.1
AT3G48690.1 Thale cress cytosol 35.59 38.89
CDX83045 Canola cytosol 35.59 38.89
KXG26418 Sorghum cytosol 36.44 38.86
Bra025117.1-P Field mustard cytosol 33.33 38.82
Bra029913.1-P Field mustard cytosol 35.59 38.65
AT3G48700.1 Thale cress cytosol 35.88 38.6
VIT_03s0063g00740.t01 Wine grape cytosol 35.03 38.51
KRH71163 Soybean cytosol 32.77 38.41
AT2G03550.1 Thale cress cytosol 33.62 38.14
KRH71161 Soybean cytosol 29.38 38.1
CDX68486 Canola cytosol 34.75 38.08
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 33.62 37.78
CDY67024 Canola cytosol 34.46 37.77
VIT_03s0063g00790.t01 Wine grape cytosol 31.92 37.54
OQU89623 Sorghum mitochondrion 40.4 37.43
AT1G49660.1 Thale cress cytosol 33.62 37.3
VIT_03s0063g00830.t01 Wine grape cytosol 31.64 37.09
CDY28098 Canola cytosol 33.62 36.96
Bra029912.1-P Field mustard cytosol 33.62 36.84
PGSC0003DMT400088862 Potato cytosol 35.59 36.63
CDY51033 Canola cytosol 33.05 36.56
Solyc10g050880.1.1 Tomato cytosol 32.2 36.54
CDY28094 Canola cytosol 33.05 36.45
KRH71162 Soybean cytosol, nucleus 33.9 36.04
CDY41024 Canola peroxisome 32.77 35.91
AT1G49640.1 Thale cress cytosol 31.92 35.87
Bra040667.1-P Field mustard cytosol 32.2 35.74
Bra025714.1-P Field mustard cytosol 24.01 35.71
CDY29339 Canola cytosol 31.92 35.42
OQU81663 Sorghum cytosol 35.59 35.39
Bra018807.1-P Field mustard cytosol 32.49 35.28
AT1G19190.1 Thale cress cytosol 31.64 35.22
Bra018809.1-P Field mustard cytosol 31.36 35.13
CDY20870 Canola cytosol 31.64 35.11
KRH50257 Soybean cytosol 32.2 35.08
OQU76051 Sorghum golgi, plasma membrane, vacuole 48.02 35.05
CDY51035 Canola cytosol 32.2 34.97
KRH71160 Soybean nucleus 37.29 33.59
PGSC0003DMT400066383 Potato cytosol 28.81 33.55
CDX96674 Canola cytosol 30.51 33.23
Bra018808.1-P Field mustard plastid 35.59 33.07
CDY28095 Canola plastid 35.31 32.89
CDY02986 Canola cytosol 32.77 32.86
Bra016519.1-P Field mustard cytosol 30.23 32.72
AT1G49650.1 Thale cress mitochondrion 34.46 32.62
CDY16521 Canola mitochondrion 34.75 32.37
Bra014213.1-P Field mustard mitochondrion 34.46 32.11
CDY51034 Canola plastid 34.46 32.11
CDY32845 Canola mitochondrion 32.2 31.15
VIT_03s0063g00770.t01 Wine grape plastid 36.16 30.77
EER97903 Sorghum cytosol 37.57 29.36
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 40.68 23.38
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1UniProt:A0A1B6QD03InterPro:AB_hydrolaseInterPro:AB_hydrolase_3GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:IPR029058EnsemblPlants:KXG35780
ProteinID:KXG35780ProteinID:KXG35780.1InterPro:Lipase_GDXG_put_SER_ASPFAM:PF07859ScanProsite:PS01174PANTHER:PTHR23024
PANTHER:PTHR23024:SF165EnsemblPlantsGene:SORBI_3002G227900SUPFAM:SSF53474SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001FCCE63
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:61957542..61959386
Molecular Weight (calculated)
37926.1 Da
IEP (calculated)
8.571
GRAVY (calculated)
0.063
Length
354 amino acids
Sequence
(BLAST)
001: MASPSRILIL LPLLFLLLGS HCSTGAAARR QLLRAGDPSS QVKFDFSPFL IEYKNGRVKR LMGTNVVAAS SDALTGVTSR DVTIDPSTGV AARLYLPSFR
101: ASTRVPVLVY FHGGAFVVES AFTPIYHAYL NTLAARAGVV AVSVNYRLAP EHPLPAAYDD SWAALKWVLA SAAAGSGSDP WLSQYGDLSR LFLAGDSAGG
201: NIAHNLALRA GEEGLDGGAR IKGVALLDPY FQGRSPVGAD STDPAYLQSA ARTWNFICAG RYPINHPYAD PLLLPASSWQ HLGASRVLVT VSGQDRLSPW
301: QRAYYAALRG SAWPGEAELY ETPGEGHVYF LTKLSSPQAL AEMAKLVAFI NRDD
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.