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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU80637 Sorghum plasma membrane 86.93 82.32
Zm00001d050479_P001 Maize extracellular, plasma membrane, vacuole 81.87 81.0
HORVU0Hr1G005140.1 Barley extracellular 58.67 69.62
Os08t0474866-00 Rice extracellular 67.73 68.65
TraesCS2D01G360900.1 Wheat extracellular 65.87 62.69
TraesCS2B01G381300.1 Wheat vacuole 65.33 62.34
GSMUA_Achr6P04360_001 Banana cytosol 42.4 54.27
KXG35780 Sorghum extracellular, vacuole 51.2 54.24
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 50.93 53.8
KXG25394 Sorghum cytosol 46.93 53.33
KXG35785 Sorghum extracellular, golgi, vacuole 52.53 52.25
GSMUA_Achr6P04230_001 Banana cytosol 32.53 52.14
GSMUA_Achr7P12950_001 Banana cytosol 44.8 52.01
GSMUA_Achr3P06860_001 Banana cytosol 33.6 51.43
KXG19591 Sorghum cytosol 42.4 49.07
TraesCS2A01G363400.1 Wheat endoplasmic reticulum, extracellular, vacuole 52.53 48.4
EER88069 Sorghum cytosol 40.27 45.35
VIT_03s0063g00750.t01 Wine grape cytosol 38.93 45.2
EER99019 Sorghum cytosol 39.2 44.95
KXG25323 Sorghum cytosol 39.47 44.85
KXG35781 Sorghum cytosol 37.33 44.73
EER89413 Sorghum cytosol 40.53 44.71
EER88163 Sorghum cytosol 37.6 44.48
EES16153 Sorghum cytosol 39.73 44.48
VIT_03s0063g00700.t01 Wine grape cytosol 37.87 43.96
KXG35760 Sorghum cytosol 37.87 43.83
VIT_03s0063g00720.t01 Wine grape cytosol 37.6 43.65
KXG21709 Sorghum cytosol, mitochondrion, plastid 32.53 43.57
KXG35782 Sorghum cytosol 38.93 43.32
Bra025117.1-P Field mustard cytosol 34.93 43.09
VIT_03s0063g00800.t01 Wine grape cytosol 34.4 43.0
KXG35783 Sorghum extracellular, vacuole 41.6 42.98
VIT_03s0063g00820.t01 Wine grape cytosol 34.4 42.86
OQU89622 Sorghum cytosol 36.27 42.77
KXG35761 Sorghum cytosol 37.07 42.64
VIT_03s0063g00740.t01 Wine grape cytosol 36.53 42.55
KRH71164 Soybean cytosol 34.4 42.43
CDX77920 Canola cytosol 35.2 42.31
OQU80639 Sorghum cytosol 37.6 42.22
PGSC0003DMT400066389 Potato cytosol 32.8 42.12
KRH50255 Soybean cytosol 34.13 42.11
PGSC0003DMT400066384 Potato cytosol 22.93 41.95
AT3G48700.1 Thale cress cytosol 36.8 41.95
VIT_03s0063g00730.t01 Wine grape cytosol 35.73 41.88
Solyc01g108560.2.1 Tomato cytosol, plastid 33.6 41.86
AT3G48690.1 Thale cress cytosol 36.0 41.67
Solyc01g108570.2.1 Tomato cytosol, extracellular 34.4 41.61
Bra019558.1-P Field mustard cytosol 35.73 41.49
CDY37916 Canola cytosol 35.73 41.49
AT1G49660.1 Thale cress cytosol 35.2 41.38
PGSC0003DMT400066385 Potato cytosol 33.87 41.37
CDX83045 Canola cytosol 35.73 41.36
VIT_03s0063g00810.t01 Wine grape cytosol 34.4 41.21
Bra029913.1-P Field mustard cytosol 35.73 41.1
Solyc01g108540.2.1 Tomato cytosol 33.87 41.1
OQU85176 Sorghum plastid 37.33 41.06
Solyc01g108530.2.1 Tomato cytosol 33.6 41.04
PGSC0003DMT400066392 Potato cytosol 34.13 40.89
CDX68486 Canola cytosol 35.2 40.87
PGSC0003DMT400066386 Potato cytosol 33.87 40.71
PGSC0003DMT400091080 Potato cytosol 33.87 40.71
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 32.53 40.67
CDY67024 Canola cytosol 34.93 40.56
EER96865 Sorghum cytosol 34.67 39.76
Solyc01g108580.2.1 Tomato cytosol 33.07 39.74
VIT_03s0063g00830.t01 Wine grape cytosol 32.0 39.74
Bra029912.1-P Field mustard cytosol 34.13 39.63
KRH50256 Soybean cytosol 33.6 39.62
KXG26418 Sorghum cytosol 34.93 39.46
KRH71163 Soybean cytosol 31.73 39.4
KRH71162 Soybean cytosol, nucleus 34.93 39.34
CDY28098 Canola cytosol 33.6 39.13
AT2G03550.1 Thale cress cytosol 32.53 39.1
CDY28094 Canola cytosol 33.07 38.63
KRH71161 Soybean cytosol 28.0 38.46
CDY51033 Canola cytosol 32.8 38.44
Bra040667.1-P Field mustard cytosol 32.53 38.24
VIT_03s0063g00790.t01 Wine grape cytosol 30.67 38.21
Solyc10g050880.1.1 Tomato cytosol 31.73 38.14
CDY29339 Canola cytosol 32.27 37.93
PGSC0003DMT400066383 Potato cytosol 30.67 37.83
Bra018807.1-P Field mustard cytosol 32.8 37.73
Bra018809.1-P Field mustard cytosol 31.73 37.66
CDY51035 Canola cytosol 32.53 37.42
AT1G19190.1 Thale cress cytosol 31.73 37.42
CDY02986 Canola cytosol 35.2 37.39
OQU81663 Sorghum cytosol 35.47 37.36
PGSC0003DMT400088862 Potato cytosol 34.13 37.21
CDY20870 Canola cytosol 31.47 36.99
Bra025714.1-P Field mustard cytosol 23.47 36.97
CDX96674 Canola cytosol 32.0 36.92
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 30.93 36.83
OQU89623 Sorghum mitochondrion 37.33 36.65
AT1G49640.1 Thale cress cytosol 30.67 36.51
Bra016519.1-P Field mustard cytosol 31.73 36.39
KRH50257 Soybean cytosol 31.47 36.31
CDY41024 Canola peroxisome 30.93 35.91
AT1G49650.1 Thale cress mitochondrion 35.73 35.83
CDY16521 Canola mitochondrion 34.93 34.47
OQU76051 Sorghum golgi, plasma membrane, vacuole 44.53 34.43
KRH71160 Soybean nucleus 36.0 34.35
Bra014213.1-P Field mustard mitochondrion 34.67 34.21
CDY32845 Canola mitochondrion 33.33 34.15
Bra018808.1-P Field mustard plastid 34.67 34.12
CDY51034 Canola plastid 33.87 33.42
CDY28095 Canola plastid 33.33 32.89
VIT_03s0063g00770.t01 Wine grape plastid 35.47 31.97
EER97903 Sorghum cytosol 37.87 31.35
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 38.13 23.21
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1InterPro:AB_hydrolaseInterPro:AB_hydrolase_3UniProt:C5YMA4EnsemblPlants:EES15127
ProteinID:EES15127ProteinID:EES15127.2GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152
GO:GO:0016787InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_ASPFAM:PF07859ScanProsite:PS01174PANTHER:PTHR23024
PANTHER:PTHR23024:SF146EnsemblPlantsGene:SORBI_3007G156600SUPFAM:SSF53474SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081AC493
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:59096561..59097688
Molecular Weight (calculated)
40675.1 Da
IEP (calculated)
5.388
GRAVY (calculated)
-0.034
Length
375 amino acids
Sequence
(BLAST)
001: MAGSFCFLSA LVLLVNMAAA LLTPPALPPG LASVGASADD GEVDFFFFPF LVLYKSGLVQ RFIGTDTVPA STDAATGVTS RDVVVNAATG LAVRLYLPPS
101: LATNRTGTDT DDSGGRLPLL VFYHGGAFVT ESAFSPTYHR YLNALVSRAR VLAVSVEYHL APEHRLPTAY DDAWAALRWA LANTRRAGTG TDPWLSRHAD
201: PARLFLAGDS AGGNIAHYVA LRAGRDGLDC DDGAAAVRGL VLLDPYFWGK RPVPSETSDE DIRRWHERTW SFLCGGRYGI DDPVINPVPM PPEEWRRLPC
301: TRVLVTVAGL DMLSARGRAY VHALRASGWQ GEAELYETPG EYHVYFLNKP DSDEAAKEME VVVNFINGDQ VSTRG
Best Arabidopsis Sequence Match ( AT3G48700.1 )
(BLAST)
001: MDSEIAADYS PMLIIYKSGR IERLVGETTV PPSSNPQNGV VSKDVVYSPD NNLSLRIYLP EKAATAETEA SVKLPLLVYF HGGGFLVETA FSPTYHTFLT
101: AAVSASDCVA VSVDYRRAPE HPIPTSYDDS WTALKWVFSH IAGSGSEDWL NKHADFSKVF LAGDSAGANI THHMTMKAAK DKLSPESLNE SGISGIILVH
201: PYFWSKTPVD DKETTDVAIR TWIESVWTLA SPNSKDGSDD PFINVVQSES VDLSGLGCGK VLVMVAEKDA LVRQGWGYWE KLGKSRWNGE VLDVVETKGE
301: GHVFHLRDPN SEKAHELVHR FAGFIKGDK
Arabidopsis Description
CXE13Probable carboxylesterase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMM9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.