CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G48690.1	OQU84317	AT4G10930.1	21798944
AT3G48690.1	OQU85411	AT5G10110.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020741_P001	Maize	golgi, mitochondrion, vacuole	91.25	90.77
Os09t0462100-01	Rice	plasma membrane	76.13	75.53
HORVU5Hr1G069090.1	Barley	endoplasmic reticulum, golgi	68.97	69.71
TraesCS5B01G240700.1	Wheat	endoplasmic reticulum, golgi	69.5	69.68
TraesCS5D01G249500.1	Wheat	endoplasmic reticulum, golgi	69.5	69.13
HORVU0Hr1G013180.1	Barley	endoplasmic reticulum, golgi, mitochondrion	68.97	68.97
TraesCS5A01G242900.1	Wheat	extracellular, golgi	67.64	66.75
KXG35780	Sorghum	extracellular, vacuole	52.52	55.93
GSMUA_Achr6P04360_001	Banana	cytosol	42.71	54.95
EES15127	Sorghum	extracellular	52.25	52.53
GSMUA_Achr7P12950_001	Banana	cytosol	44.3	51.7
KXG25394	Sorghum	cytosol	44.03	50.3
OQU80637	Sorghum	plasma membrane	52.79	50.25
GSMUA_Achr6P04230_001	Banana	cytosol	31.03	50.0
GSMUA_Achr3P06860_001	Banana	cytosol	31.3	48.16
EES14010	Sorghum	endoplasmic reticulum, extracellular, vacuole	44.56	47.32
EER99019	Sorghum	cytosol	39.52	45.57
EER88069	Sorghum	cytosol	40.05	45.35
EER89413	Sorghum	cytosol	39.79	44.12
KXG19591	Sorghum	cytosol	37.4	43.52
KXG35783	Sorghum	extracellular, vacuole	40.85	42.42
VIT_03s0063g00750.t01	Wine grape	cytosol	36.34	42.41
CDX77920	Canola	cytosol	35.01	42.31
KXG35781	Sorghum	cytosol	35.01	42.17
PGSC0003DMT400091080	Potato	cytosol	34.75	41.99
KXG35760	Sorghum	cytosol	36.07	41.98
CDY37916	Canola	cytosol	35.81	41.8
Solyc01g108570.2.1	Tomato	cytosol, extracellular	34.22	41.61
Bra019558.1-P	Field mustard	cytosol	35.54	41.49
PGSC0003DMT400066384	Potato	cytosol	22.55	41.46
Solyc01g108560.2.1	Tomato	cytosol, plastid	32.89	41.2
CDX68486	Canola	cytosol	35.28	41.18
Bra029913.1-P	Field mustard	cytosol	35.54	41.1
CDX83045	Canola	cytosol	35.28	41.05
EER88163	Sorghum	cytosol	34.48	41.01
VIT_03s0063g00800.t01	Wine grape	cytosol	32.63	41.0
Bra025117.1-P	Field mustard	cytosol	32.89	40.79
KRH71164	Soybean	cytosol	32.89	40.79
Solyc01g108540.2.1	Tomato	cytosol	33.42	40.78
AT3G48690.1	Thale cress	cytosol	35.01	40.74
KRH71161	Soybean	cytosol	29.44	40.66
KXG25323	Sorghum	cytosol	35.54	40.61
PGSC0003DMT400066392	Potato	cytosol	33.69	40.58
KRH50256	Soybean	cytosol	34.22	40.57
KXG35761	Sorghum	cytosol	35.01	40.49
PGSC0003DMT400066389	Potato	cytosol	31.3	40.41
PGSC0003DMT400066386	Potato	cytosol	33.16	40.06
Solyc01g108580.2.1	Tomato	cytosol	33.16	40.06
EES16153	Sorghum	cytosol	35.54	40.0
OQU89622	Sorghum	cytosol	33.69	39.94
KRH50255	Soybean	cytosol	32.1	39.8
KXG35782	Sorghum	cytosol	35.54	39.76
VIT_03s0063g00740.t01	Wine grape	cytosol	33.95	39.75
KRH71162	Soybean	cytosol, nucleus	35.01	39.64
Bra029912.1-P	Field mustard	cytosol	33.95	39.63
VIT_03s0063g00820.t01	Wine grape	cytosol	31.57	39.53
AT3G48700.1	Thale cress	cytosol	34.48	39.51
VIT_03s0063g00730.t01	Wine grape	cytosol	33.42	39.38
CDY67024	Canola	cytosol	33.69	39.32
KXG21709	Sorghum	cytosol, mitochondrion, plastid	29.18	39.29
Bra025714.1-P	Field mustard	cytosol	24.67	39.08
EER96865	Sorghum	cytosol	33.69	38.84
PGSC0003DMT400066385	Potato	cytosol	31.57	38.76
VIT_03s0063g00780.t01	Wine grape	cytosol, peroxisome, plastid	30.77	38.67
OQU80639	Sorghum	cytosol	34.22	38.62
Solyc10g050880.1.1	Tomato	cytosol	31.83	38.46
Solyc01g108530.2.1	Tomato	cytosol	31.3	38.44
OQU85176	Sorghum	plastid	34.48	38.12
VIT_03s0063g00700.t01	Wine grape	cytosol	32.63	38.08
VIT_03s0063g00720.t01	Wine grape	cytosol	32.63	38.08
AT1G19190.1	Thale cress	cytosol	31.83	37.74
KRH50257	Soybean	cytosol	32.36	37.54
AT2G03550.1	Thale cress	cytosol	31.03	37.5
AT1G49660.1	Thale cress	cytosol	31.57	37.3
PGSC0003DMT400088862	Potato	cytosol	33.95	37.21
VIT_03s0063g00830.t01	Wine grape	cytosol	29.71	37.09
CDY28094	Canola	cytosol	31.57	37.07
Bra040667.1-P	Field mustard	cytosol	31.3	36.99
CDY29339	Canola	cytosol	31.3	36.99
OQU89623	Sorghum	mitochondrion	37.4	36.91
CDY41024	Canola	peroxisome	31.57	36.84
KXG26418	Sorghum	cytosol	32.36	36.75
OQU76051	Sorghum	golgi, plasma membrane, vacuole	47.21	36.7
CDY20870	Canola	cytosol	30.77	36.36
OQU81663	Sorghum	cytosol	34.22	36.24
CDY28098	Canola	cytosol	30.77	36.02
Bra018807.1-P	Field mustard	cytosol	31.03	35.89
KRH71160	Soybean	nucleus	37.4	35.88
VIT_03s0063g00810.t01	Wine grape	cytosol	29.71	35.78
CDY02986	Canola	cytosol	33.42	35.69
CDY51033	Canola	cytosol	30.24	35.62
CDY51035	Canola	cytosol	30.77	35.58
CDX96674	Canola	cytosol	30.5	35.38
PGSC0003DMT400066383	Potato	cytosol	28.38	35.2
AT1G49640.1	Thale cress	cytosol	29.18	34.92
VIT_03s0063g00790.t01	Wine grape	cytosol	27.59	34.55
Bra018809.1-P	Field mustard	cytosol	28.91	34.49
KRH71163	Soybean	cytosol	27.59	34.44
Solyc01g108520.1.1	Tomato	endoplasmic reticulum, extracellular	28.65	34.29
Bra016519.1-P	Field mustard	cytosol	29.71	34.25
Bra018808.1-P	Field mustard	plastid	32.89	32.55
CDY28095	Canola	plastid	32.63	32.37
CDY16521	Canola	mitochondrion	32.36	32.11
CDY51034	Canola	plastid	32.36	32.11
Bra014213.1-P	Field mustard	mitochondrion	32.1	31.84
CDY32845	Canola	mitochondrion	30.24	31.15
AT1G49650.1	Thale cress	mitochondrion	30.77	31.02
VIT_03s0063g00770.t01	Wine grape	plastid	32.1	29.09
EER97903	Sorghum	cytosol	30.77	25.61
GSMUA_Achr5P24460_001	Banana	cytosol, endoplasmic reticulum, peroxisome	37.93	23.21

Protein Annotations

Gene3D:3.40.50.1820	MapMan:35.1	UniProt:A0A1B6QCY4	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:IPR029058	EnsemblPlants:KXG35785
ProteinID:KXG35785	ProteinID:KXG35785.1	ProteinID:KXG35786.1	InterPro:Lipase_GDXG_put_SER_AS	ProteinID:OQU89624.1	PFAM:PF07859
ScanProsite:PS01174	PANTHER:PTHR23024	PANTHER:PTHR23024:SF164	EnsemblPlantsGene:SORBI_3002G228400	SUPFAM:SSF53474	TMHMM:TMhelix
UniParc:UPI00081ADD23	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:61981349..61984587

Molecular Weight (calculated)

41037.1 Da

IEP (calculated)

9.367

GRAVY (calculated)

-0.160

Length

377 amino acids

Sequence
(BLAST)

001: MVAKTRRQLA KLTLLLLALL LLLAAILLCV FLIPRHHRRP LPPASPPPGN ASNPDDSIVA FDFSPYLIMY KSGRVHRLDG TARCSAGVDE ATGVTSKDVV
101: LDSRTGLAAR MYLPPKDPGS SGRRHPVLVF YHGGAFVIES AFTPLYHAYL NGVVAKARVV AVSVEYRLAP EHRLPTAYDD SWRALKWVAR NAASGPEPWL
201: RDRGNLSRLF VAGDSAGANI AHNMARRAGA GGTEEGGLDG GGAAITGLLL LDPYFWGKKP VAGETTDPAR RRQYEATWSF ICGGRYGIDD PLVDPLSMPA
301: SQWRKLACSR VAVTSSGLDD FRPRGLAYVA ALNGSGWDGE IQQYETPGER HVYFLDRPKD PDSIKELAFV TGFLTRE

Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)

001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF

Arabidopsis Description

CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.