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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
OQU84317
OQU85411

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 OQU84317 AT4G10930.1 21798944
AT3G48690.1 OQU85411 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0214300-01 Rice plasma membrane, plastid 71.91 72.36
TraesCS7A01G172500.1 Wheat peroxisome 70.37 70.37
TraesCS7B01G077300.1 Wheat peroxisome 69.75 69.75
TraesCS7D01G173300.1 Wheat extracellular 69.75 63.31
GSMUA_Achr6P04230_001 Banana cytosol 40.12 55.56
GSMUA_Achr6P04360_001 Banana cytosol 49.07 54.27
GSMUA_Achr3P06860_001 Banana cytosol 39.2 51.84
EER99019 Sorghum cytosol 47.84 47.4
GSMUA_Achr7P12950_001 Banana cytosol 46.3 46.44
KXG35781 Sorghum cytosol 43.83 45.37
KXG35761 Sorghum cytosol 44.75 44.48
KXG35760 Sorghum cytosol 44.44 44.44
OQU89622 Sorghum cytosol 43.52 44.34
KXG35782 Sorghum cytosol 45.68 43.92
CDX77920 Canola cytosol 42.28 43.91
CDY37916 Canola cytosol 43.52 43.65
KXG25394 Sorghum cytosol 44.44 43.64
CDX83045 Canola cytosol 43.52 43.52
KXG35780 Sorghum extracellular, vacuole 47.53 43.5
OQU80639 Sorghum cytosol 44.75 43.41
Bra019558.1-P Field mustard cytosol 43.21 43.34
Bra029913.1-P Field mustard cytosol 43.52 43.25
AT3G48690.1 Thale cress cytosol 43.21 43.21
EER88163 Sorghum cytosol 41.98 42.9
KRH50255 Soybean cytosol 40.12 42.76
CDX68486 Canola cytosol 42.59 42.72
EES16153 Sorghum cytosol 44.14 42.69
KXG25323 Sorghum cytosol 43.21 42.42
EES15127 Sorghum extracellular 49.07 42.4
EER88069 Sorghum cytosol 43.52 42.34
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 46.3 42.25
PGSC0003DMT400066385 Potato cytosol 39.81 42.02
AT3G48700.1 Thale cress cytosol 42.59 41.95
EER96865 Sorghum cytosol 42.28 41.9
VIT_03s0063g00820.t01 Wine grape cytosol 38.89 41.86
KRH71164 Soybean cytosol 39.2 41.78
KXG21709 Sorghum cytosol, mitochondrion, plastid 35.8 41.43
VIT_03s0063g00750.t01 Wine grape cytosol 41.05 41.18
Solyc01g108530.2.1 Tomato cytosol 38.89 41.04
AT2G03550.1 Thale cress cytosol 39.51 41.03
PGSC0003DMT400066384 Potato cytosol 25.93 40.98
OQU80637 Sorghum plasma membrane 50.0 40.91
EER89413 Sorghum cytosol 42.9 40.88
AT1G49660.1 Thale cress cytosol 40.12 40.75
VIT_03s0063g00830.t01 Wine grape cytosol 37.96 40.73
PGSC0003DMT400091080 Potato cytosol 39.2 40.71
Bra025117.1-P Field mustard cytosol 37.96 40.46
VIT_03s0063g00810.t01 Wine grape cytosol 38.89 40.26
Solyc01g108540.2.1 Tomato cytosol 38.27 40.13
CDY67024 Canola cytosol 39.81 39.94
Solyc01g108560.2.1 Tomato cytosol, plastid 37.04 39.87
Bra040667.1-P Field mustard cytosol 39.2 39.81
KXG26418 Sorghum cytosol 40.74 39.76
Solyc10g050880.1.1 Tomato cytosol 38.27 39.74
PGSC0003DMT400066389 Potato cytosol 35.8 39.73
Solyc01g108570.2.1 Tomato cytosol, extracellular 37.96 39.68
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.73 39.67
VIT_03s0063g00800.t01 Wine grape cytosol 36.73 39.67
VIT_03s0063g00700.t01 Wine grape cytosol 39.51 39.63
AT1G19190.1 Thale cress cytosol 38.89 39.62
PGSC0003DMT400066392 Potato cytosol 38.27 39.62
CDY20870 Canola cytosol 38.89 39.5
VIT_03s0063g00740.t01 Wine grape cytosol 39.2 39.44
PGSC0003DMT400066386 Potato cytosol 37.96 39.42
Solyc01g108580.2.1 Tomato cytosol 37.96 39.42
VIT_03s0063g00720.t01 Wine grape cytosol 39.2 39.32
CDY28094 Canola cytosol 38.89 39.25
CDY29339 Canola cytosol 38.58 39.19
CDY28098 Canola cytosol 38.89 39.13
Bra029912.1-P Field mustard cytosol 38.89 39.01
KRH50256 Soybean cytosol 38.27 38.99
Bra018807.1-P Field mustard cytosol 39.2 38.96
CDY51033 Canola cytosol 38.27 38.75
VIT_03s0063g00730.t01 Wine grape cytosol 38.27 38.75
OQU85176 Sorghum plastid 40.74 38.71
CDY41024 Canola peroxisome 38.58 38.7
CDY51035 Canola cytosol 38.89 38.65
OQU89623 Sorghum mitochondrion 45.37 38.48
KRH71162 Soybean cytosol, nucleus 39.2 38.14
Bra018809.1-P Field mustard cytosol 37.04 37.97
VIT_03s0063g00790.t01 Wine grape cytosol 35.19 37.87
AT1G49640.1 Thale cress cytosol 36.73 37.78
KXG35783 Sorghum extracellular, vacuole 41.98 37.47
KRH71163 Soybean cytosol 34.88 37.42
KXG35785 Sorghum extracellular, golgi, vacuole 43.52 37.4
KRH71161 Soybean cytosol 31.17 37.0
Bra025714.1-P Field mustard cytosol 27.16 36.97
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 35.8 36.83
CDX96674 Canola cytosol 36.73 36.62
Bra016519.1-P Field mustard cytosol 36.42 36.09
PGSC0003DMT400066383 Potato cytosol 33.33 35.53
PGSC0003DMT400088862 Potato cytosol 37.65 35.47
OQU81663 Sorghum cytosol 38.89 35.39
CDY02986 Canola cytosol 38.27 35.13
Bra018808.1-P Field mustard plastid 40.43 34.38
AT1G49650.1 Thale cress mitochondrion 38.89 33.69
Bra014213.1-P Field mustard mitochondrion 39.51 33.68
CDY16521 Canola mitochondrion 39.51 33.68
CDY32845 Canola mitochondrion 37.96 33.61
CDY51034 Canola plastid 39.2 33.42
KRH50257 Soybean cytosol 33.02 32.92
CDY28095 Canola plastid 38.58 32.89
VIT_03s0063g00770.t01 Wine grape plastid 40.12 31.25
KRH71160 Soybean nucleus 36.73 30.28
OQU76051 Sorghum golgi, plasma membrane, vacuole 44.44 29.69
EER97903 Sorghum cytosol 41.36 29.58
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 44.44 23.38
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1UniProt:A0A194YJ13InterPro:AB_hydrolaseInterPro:AB_hydrolase_3GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:IPR029058EnsemblPlants:KXG19591
ProteinID:KXG19591ProteinID:KXG19591.1InterPro:Lipase_GDXG_HIS_ASInterPro:Lipase_GDXG_put_SER_ASPFAM:PF07859ScanProsite:PS01173
ScanProsite:PS01174PANTHER:PTHR23024PANTHER:PTHR23024:SF341EnsemblPlantsGene:SORBI_3010G083100SUPFAM:SSF53474UniParc:UPI0003C700CC
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:+:7092579..7094432
Molecular Weight (calculated)
34541.9 Da
IEP (calculated)
5.057
GRAVY (calculated)
-0.057
Length
324 amino acids
Sequence
(BLAST)
001: MASRDAATDD VAVELLPFIR LYKSGRVERL IGNDTAPASL DDGTSTGGVA SKDVTIDPAT NLSVRLYLPT AAGAGDKLPI VVYFHGGGFM VESASSAKYH
101: RYLNALAARA GAVAVSVDYR RVPEHRLPAA YDDSWAALAW AVGAACGDES EPEPWLTKHG DPSRVFLAGD SAGANIAHNV AMRAAVAEGL PAIRIRGVLL
201: MHPYLWDASD AMGPDLEERI RREWQLMTGR PDARVDDPWL SPTSARAPPL ALLPTQRVLV AVAGEDFLAP KGRAYHAALL HSGWPGEAEL VDTPGEQHVF
301: HLDQPGTAVA EELMDRVVAF IAGA
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.