Skip to main content
crop-pal logo
Rice
Search for another protein from :
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • nucleus 2
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
  • cytosol 2
  • plastid 1
  • mitochondrion 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
 plasma membrane: 27800704
plastid: 27992503
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0752300-01
Os12t0209700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 Os12t0209700-01 AT4G10930.1 21798944
AT3G48690.1 Os02t0752300-01 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G077300.1 Wheat peroxisome 75.78 75.31
TraesCS7A01G172500.1 Wheat peroxisome 75.47 75.0
KXG19591 Sorghum cytosol 72.36 71.91
TraesCS7D01G173300.1 Wheat extracellular 75.47 68.07
GSMUA_Achr6P04360_001 Banana cytosol 51.24 56.31
GSMUA_Achr6P04230_001 Banana cytosol 40.37 55.56
GSMUA_Achr3P06860_001 Banana cytosol 41.61 54.69
GSMUA_Achr7P12950_001 Banana cytosol 49.69 49.54
Os08t0474866-00 Rice extracellular 53.73 46.76
Os09t0460400-01 Rice cytosol 45.65 46.67
Os09t0461700-01 Rice cytosol 45.65 46.08
Os09t0461500-01 Rice golgi, mitochondrion 49.69 45.98
Os08t0475100-01 Rice extracellular 47.52 45.95
Os09t0462200-01 Rice cytosol, extracellular 47.52 45.54
Os08t0475400-02 Rice cytosol, plasma membrane 45.96 45.26
Os09t0460700-01 Rice cytosol 43.79 45.19
Os09t0460500-00 Rice cytosol 43.48 44.73
CDX77920 Canola cytosol 42.86 44.23
VIT_03s0063g00820.t01 Wine grape cytosol 41.3 44.19
KRH71164 Soybean cytosol 41.61 44.08
CDY37916 Canola cytosol 44.1 43.96
CDX83045 Canola cytosol 44.1 43.83
KRH50255 Soybean cytosol 41.3 43.75
VIT_03s0063g00800.t01 Wine grape cytosol 40.68 43.67
Bra019558.1-P Field mustard cytosol 43.79 43.65
Bra029913.1-P Field mustard cytosol 44.1 43.56
PGSC0003DMT400066385 Potato cytosol 41.3 43.32
CDX68486 Canola cytosol 43.17 43.03
PGSC0003DMT400066384 Potato cytosol 27.33 42.93
AT3G48690.1 Thale cress cytosol 43.17 42.9
Solyc01g108530.2.1 Tomato cytosol 40.68 42.67
Solyc10g050880.1.1 Tomato cytosol 40.99 42.31
VIT_03s0063g00750.t01 Wine grape cytosol 42.24 42.11
PGSC0003DMT400091080 Potato cytosol 40.68 41.99
Os02t0567800-01 Rice cytosol 41.61 41.88
Solyc01g108560.2.1 Tomato cytosol, plastid 39.13 41.86
VIT_03s0063g00810.t01 Wine grape cytosol 40.68 41.85
AT3G48700.1 Thale cress cytosol 42.55 41.64
VIT_03s0063g00720.t01 Wine grape cytosol 41.61 41.49
Os09t0461900-01 Rice cytosol, plasma membrane 41.3 41.43
Solyc01g108540.2.1 Tomato cytosol 39.75 41.42
Os06t0214800-01 Rice cytosol 42.24 41.34
KRH50256 Soybean cytosol 40.68 41.2
VIT_03s0063g00700.t01 Wine grape cytosol 41.3 41.18
PGSC0003DMT400066389 Potato cytosol 37.27 41.1
AT2G03550.1 Thale cress cytosol 39.75 41.03
Solyc01g108580.2.1 Tomato cytosol 39.75 41.03
Os09t0455500-01 Rice cytosol 40.68 40.94
VIT_03s0063g00830.t01 Wine grape cytosol 38.2 40.73
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 37.89 40.67
Solyc01g108570.2.1 Tomato cytosol, extracellular 39.13 40.65
Bra025117.1-P Field mustard cytosol 38.2 40.46
Bra040667.1-P Field mustard cytosol 40.06 40.44
Os09t0455900-01 Rice cytosol, plasma membrane 40.06 40.44
PGSC0003DMT400066386 Potato cytosol 39.13 40.38
VIT_03s0063g00740.t01 Wine grape cytosol 40.37 40.37
CDY67024 Canola cytosol 40.37 40.25
AT1G49660.1 Thale cress cytosol 39.75 40.13
Os09t0462100-01 Rice plasma membrane 47.2 40.0
PGSC0003DMT400066392 Potato cytosol 38.82 39.94
CDY29339 Canola cytosol 39.44 39.81
KRH71163 Soybean cytosol 37.27 39.74
VIT_03s0063g00730.t01 Wine grape cytosol 39.44 39.69
AT1G19190.1 Thale cress cytosol 39.13 39.62
VIT_03s0063g00790.t01 Wine grape cytosol 36.96 39.53
CDY20870 Canola cytosol 39.13 39.5
Bra029912.1-P Field mustard cytosol 39.44 39.32
CDY41024 Canola peroxisome 39.44 39.32
Bra018807.1-P Field mustard cytosol 39.75 39.26
CDY28094 Canola cytosol 39.13 39.25
Os06t0214850-00 Rice plasma membrane 42.86 39.2
KRH71161 Soybean cytosol 33.23 39.19
CDY28098 Canola cytosol 39.13 39.13
CDY51033 Canola cytosol 38.82 39.06
CDY51035 Canola cytosol 39.44 38.96
KRH71162 Soybean cytosol, nucleus 40.06 38.74
AT1G49640.1 Thale cress cytosol 37.89 38.73
Bra018809.1-P Field mustard cytosol 37.89 38.61
Os08t0475000-00 Rice cytosol 40.99 38.48
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 37.27 38.1
CDX96674 Canola cytosol 37.89 37.54
Bra025714.1-P Field mustard cytosol 27.64 37.4
Bra016519.1-P Field mustard cytosol 37.27 36.7
PGSC0003DMT400088862 Potato cytosol 39.13 36.63
PGSC0003DMT400066383 Potato cytosol 34.47 36.51
KRH50257 Soybean cytosol 36.34 36.0
Os09t0460300-01 Rice plastid 42.55 35.4
Bra018808.1-P Field mustard plastid 41.3 34.91
CDY02986 Canola cytosol 38.2 34.84
AT1G49650.1 Thale cress mitochondrion 39.75 34.22
CDY51034 Canola plastid 40.37 34.21
Bra014213.1-P Field mustard mitochondrion 39.75 33.68
CDY16521 Canola mitochondrion 39.75 33.68
CDY28095 Canola plastid 39.75 33.68
CDY32845 Canola mitochondrion 37.89 33.33
VIT_03s0063g00770.t01 Wine grape plastid 42.24 32.69
KRH71160 Soybean nucleus 39.75 32.57
Os07t0501400-00 Rice plastid 42.86 30.8
Os07t0526600-01 Rice extracellular 43.79 30.65
Os09t0435700-00 Rice mitochondrion 38.82 29.34
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 45.96 24.03
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1EntrezGene:4340476InterPro:AB_hydrolaseInterPro:AB_hydrolase_3EMBL:AK108107
ProteinID:BAD35203.1ProteinID:BAD35306.1ProteinID:BAF19045.1ProteinID:BAS96765.1GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0016787InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_AS
EnsemblPlantsGene:Os06g0214300EnsemblPlants:Os06t0214300-01PFAM:PF07859ScanProsite:PS01174PANTHER:PTHR23024PANTHER:PTHR23024:SF341
UniProt:Q69Y21SUPFAM:SSF53474UniParc:UPI00004036F5RefSeq:XP_015641767.1SEG:seg:
Description
Alpha/beta hydrolase fold-3 domain containing protein. (Os06t0214300-01)
Coordinates
chr6:+:5813497..5814627
Molecular Weight (calculated)
34041.5 Da
IEP (calculated)
5.538
GRAVY (calculated)
0.130
Length
322 amino acids
Sequence
(BLAST)
001: MASTDADADA VAVELLPFIR VYVSGRVERL LGTDTVAASL DEPTGVASKD VTVDPATNLS VRLYLPPAVA AGERLPILVY FHGGGFMVES ATSPTYHRYL
101: NALASRARVV AVSVEYRLAP EHPLPAAYDD SWAALAWAVA TAAAPGAVDP EPWLAAHGDA SRVFIAGDSA GANIAHNVAM RAAAAPLPGG AGITGVLLMH
201: PYFWDASNTM GPALEDRIRR EWRFMCGSPD VRVDDPRLSP TVQQGAPSLA ALPCRRVMVA VAGDDFLAGK GRAYHAALVA SRWHGEAELV DTPGEDHLFH
301: LTRPGTAAAA KMMDLVVDFV TR
Best Arabidopsis Sequence Match ( AT1G47480.1 )
(BLAST)
001: MESTKKQVSL ELLPWLVVHT DGTVERLAGT EVCPPGLDPI TGVFSKDIII EPKTGLSARI YRPFSIQPGQ KIPLMLYFHG GAFLISSTSF PSYHTSLNKI
101: VNQANVIAVS VNYRLAPEHP LPTAYEDSWT ALKNIQAINE PWINDYADLD SLFLVGDSAG ANISHHLAFR AKQSDQTLKI KGIGMIHPYF WGTQPIGAEI
201: KDEARKQMVD GWWEFVCPSE KGSDDPWINP FADGSPDLGG LGCERVMITV AEKDILNERG KMYYERLVKS EWKGKVEIME TKEKDHVFHI FEPDCDEAME
301: MVRCLALFIN QVEA
Arabidopsis Description
CXE2Probable carboxylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX78]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.