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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • mitochondrion 1
  • nucleus 1
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:nucleus, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI

Inferred distinct locusB in Crop

locusBlocations
Os02t0752300-01
Os12t0209700-01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G48690.1 Os12t0209700-01 AT4G10930.1 21798944
AT3G48690.1 Os02t0752300-01 AT5G10110.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES14010 Sorghum endoplasmic reticulum, extracellular, vacuole 76.88 72.11
TraesCS5B01G412100.1 Wheat endoplasmic reticulum 71.17 70.75
Zm00001d031801_P001 Maize endoplasmic reticulum 75.08 70.42
TraesCS5D01G417100.1 Wheat endoplasmic reticulum 70.57 69.73
HORVU5Hr1G098770.1 Barley plasma membrane 71.47 65.75
Os09t0461500-01 Rice golgi, mitochondrion 63.36 60.63
TraesCS5A01G407200.1 Wheat plastid 71.17 55.63
Os08t0474866-00 Rice extracellular 54.65 49.19
GSMUA_Achr6P04360_001 Banana cytosol 42.94 48.81
GSMUA_Achr6P04230_001 Banana cytosol 33.63 47.86
GSMUA_Achr3P06860_001 Banana cytosol 35.14 47.76
Os06t0214300-01 Rice plasma membrane, plastid 45.95 47.52
Os09t0462100-01 Rice plasma membrane 52.85 46.32
GSMUA_Achr7P12950_001 Banana cytosol 42.64 43.96
Os09t0461900-01 Rice cytosol, plasma membrane 41.44 42.99
Os09t0461700-01 Rice cytosol 41.14 42.95
Os09t0460500-00 Rice cytosol 39.94 42.49
Os09t0460700-01 Rice cytosol 39.64 42.31
Os09t0460400-01 Rice cytosol 39.34 41.59
Os06t0214800-01 Rice cytosol 40.24 40.73
VIT_03s0063g00810.t01 Wine grape cytosol 37.84 40.26
KRH50255 Soybean cytosol 36.64 40.13
PGSC0003DMT400066384 Potato cytosol 24.62 40.0
VIT_03s0063g00780.t01 Wine grape cytosol, peroxisome, plastid 36.04 40.0
KRH71164 Soybean cytosol 36.34 39.8
Os08t0475400-02 Rice cytosol, plasma membrane 39.04 39.76
Os02t0567800-01 Rice cytosol 38.14 39.69
VIT_03s0063g00730.t01 Wine grape cytosol 38.14 39.69
Os08t0475000-00 Rice cytosol 40.84 39.65
Os09t0462200-01 Rice cytosol, extracellular 39.94 39.58
VIT_03s0063g00820.t01 Wine grape cytosol 35.74 39.53
VIT_03s0063g00700.t01 Wine grape cytosol 38.14 39.32
VIT_03s0063g00720.t01 Wine grape cytosol 38.14 39.32
VIT_03s0063g00750.t01 Wine grape cytosol 38.14 39.32
CDX77920 Canola cytosol 36.64 39.1
VIT_03s0063g00800.t01 Wine grape cytosol 35.14 39.0
KRH71161 Soybean cytosol 31.83 38.83
Os09t0455900-01 Rice cytosol, plasma membrane 36.94 38.56
VIT_03s0063g00740.t01 Wine grape cytosol 37.24 38.51
CDY37916 Canola cytosol 37.24 38.39
KRH50256 Soybean cytosol 36.64 38.36
Os09t0455500-01 Rice cytosol 36.64 38.12
Bra019558.1-P Field mustard cytosol 36.94 38.08
PGSC0003DMT400066385 Potato cytosol 34.83 37.78
Solyc01g108530.2.1 Tomato cytosol 34.83 37.78
CDY67024 Canola cytosol 36.64 37.77
VIT_03s0063g00790.t01 Wine grape cytosol 33.93 37.54
Os06t0214850-00 Rice plasma membrane 39.64 37.5
KRH71163 Soybean cytosol 33.93 37.42
VIT_03s0063g00830.t01 Wine grape cytosol 33.93 37.42
CDX83045 Canola cytosol 36.34 37.35
AT2G03550.1 Thale cress cytosol 34.83 37.18
Bra029912.1-P Field mustard cytosol 36.04 37.15
Bra029913.1-P Field mustard cytosol 36.34 37.12
Solyc01g108570.2.1 Tomato cytosol, extracellular 34.53 37.1
Bra025117.1-P Field mustard cytosol 33.63 36.84
CDX68486 Canola cytosol 35.74 36.84
CDY28098 Canola cytosol 35.44 36.65
PGSC0003DMT400066389 Potato cytosol 32.13 36.64
PGSC0003DMT400066386 Potato cytosol 34.23 36.54
PGSC0003DMT400091080 Potato cytosol 34.23 36.54
Solyc10g050880.1.1 Tomato cytosol 34.23 36.54
AT3G48700.1 Thale cress cytosol 36.04 36.47
PGSC0003DMT400066392 Potato cytosol 34.23 36.42
Solyc01g108540.2.1 Tomato cytosol 33.63 36.25
Solyc01g108560.2.1 Tomato cytosol, plastid 32.73 36.21
AT3G48690.1 Thale cress cytosol 35.14 36.11
Solyc01g108580.2.1 Tomato cytosol 33.63 35.9
CDY28094 Canola cytosol 34.53 35.83
KRH71162 Soybean cytosol, nucleus 35.74 35.74
PGSC0003DMT400066383 Potato cytosol 32.43 35.53
CDY51033 Canola cytosol 33.93 35.31
CDY41024 Canola peroxisome 34.23 35.29
Bra018809.1-P Field mustard cytosol 33.03 34.81
Solyc01g108520.1.1 Tomato endoplasmic reticulum, extracellular 32.73 34.6
AT1G19190.1 Thale cress cytosol 33.03 34.59
AT1G49660.1 Thale cress cytosol 33.03 34.48
Bra018807.1-P Field mustard cytosol 33.63 34.36
CDY51035 Canola cytosol 33.33 34.05
Bra025714.1-P Field mustard cytosol 24.32 34.03
Os09t0460300-01 Rice plastid 39.34 33.85
AT1G49640.1 Thale cress cytosol 31.83 33.65
Bra040667.1-P Field mustard cytosol 31.83 33.23
PGSC0003DMT400088862 Potato cytosol 34.23 33.14
CDX96674 Canola cytosol 32.13 32.92
Bra016519.1-P Field mustard cytosol 32.13 32.72
KRH50257 Soybean cytosol 31.83 32.62
CDY29339 Canola cytosol 31.23 32.6
CDY20870 Canola cytosol 30.93 32.29
AT1G49650.1 Thale cress mitochondrion 35.44 31.55
CDY02986 Canola cytosol 33.33 31.44
VIT_03s0063g00770.t01 Wine grape plastid 39.04 31.25
CDY16521 Canola mitochondrion 35.44 31.05
Bra014213.1-P Field mustard mitochondrion 35.14 30.79
Bra018808.1-P Field mustard plastid 35.14 30.71
CDY51034 Canola plastid 34.53 30.26
KRH71160 Soybean nucleus 35.44 30.03
CDY28095 Canola plastid 34.23 30.0
CDY32845 Canola mitochondrion 32.73 29.78
Os07t0501400-00 Rice plastid 38.74 28.79
Os07t0526600-01 Rice extracellular 37.24 26.96
Os09t0435700-00 Rice mitochondrion 33.33 26.06
GSMUA_Achr5P24460_001 Banana cytosol, endoplasmic reticulum, peroxisome 39.34 21.27
Protein Annotations
Gene3D:3.40.50.1820MapMan:35.1EntrezGene:4345822InterPro:AB_hydrolaseInterPro:AB_hydrolase_3EMBL:AK105839
ProteinID:BAD09345.1ProteinID:BAF23948.1ProteinID:BAT05876.1GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0016787InterPro:IPR029058InterPro:Lipase_GDXG_put_SER_ASEnsemblPlantsGene:Os08g0475100
EnsemblPlants:Os08t0475100-01PFAM:PF07859ScanProsite:PS01174PANTHER:PTHR23024PANTHER:PTHR23024:SF165UniProt:Q6ZDG5
SUPFAM:SSF53474SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000023ADCFRefSeq:XP_015648686.1SEG:seg
Description
Alpha/beta hydrolase fold-3 domain containing protein. (Os08t0475100-01)
Coordinates
chr8:-:23411672..23412899
Molecular Weight (calculated)
36243.6 Da
IEP (calculated)
9.900
GRAVY (calculated)
0.021
Length
333 amino acids
Sequence
(BLAST)
001: MASRSLFALL VVAAAMCASV ASALRSRAAT DPNMEVKFDF TPFLIQYRSG RVQRLMGTTV VAPSLDVRTG VVSKDVVVDR STGLAVRLYR PKHRGGRLPV
101: LIYFHGGAFV VESAFDPVYH NYLNALAAKA GAIAVSVNYR LAPEHPLPAA YDDAWTVLRW VAADMQRGAD SWLARRGDAS RLFVAGDSAG GNIAHNLAMR
201: AGQHGGGATI RGVALLDPYF LGKYVDPTAQ RAWGFICAGR YGMEHPYVNP MALPAASWRR LATSRVLMTV SDLDRLGPWQ RAYVDALRGS GWPGEARLYV
301: TPGEGHCYFL NNLESPKEAM HMATLAAFIN RDT
Best Arabidopsis Sequence Match ( AT1G19190.1 )
(BLAST)
001: MDSEIAFDYS PRFRIFKNGG IERLVPETFV PPSLNPENGV VSKDAVYSPE KNLSLRIYLP QNSVYETGEK KIPLLVYFHG GGFIMETAFS PIYHTFLTSA
101: VSATDCIAVS VEYRRAPEHP IPTLYEDSWD AIQWIFTHIT RSGPEDWLNK HADFSKVFLA GDSAGANIAH HMAIRVDKEK LPPENFKISG MILFHPYFLS
201: KALIEEMEVE AMRYYERLWR IASPDSGNGV EDPWINVVGS DLTGLGCRRV LVMVAGNDVL ARGGWSYVAE LEKSGWIGKV KVMETKEEGH VFHLRDPDSE
301: NARRVLRNFA EFLKEETF
Arabidopsis Description
CXE1Probable carboxylesterase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMA7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.