Factsheet for Os02t0752300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0132200-00

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G10110.1	Os02t0132200-00	AT2G40630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G281500.1	Wheat	cytosol, nucleus, plastid	62.31	63.86
TraesCS6B01G331200.2	Wheat	cytosol, mitochondrion, nucleus	62.31	63.86
OQU85411	Sorghum	nucleus	61.4	60.84
TraesCS6A01G302100.1	Wheat	cytosol	61.4	58.72
Zm00001d052230_P001	Maize	nucleus	57.75	57.4
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	17.93	56.19
HORVU0Hr1G017100.2	Barley	cytosol	60.18	54.85
Bra024356.1-P	Field mustard	cytosol	18.54	44.53
Bra006048.1-P	Field mustard	cytosol	18.54	42.36
CDX81159	Canola	nucleus	28.88	33.33
CDX78368	Canola	nucleus	27.96	32.62
Bra037805.1-P	Field mustard	cytosol	27.36	30.51
CDY18686	Canola	cytosol	27.05	30.17
CDY14541	Canola	nucleus	27.05	28.99
CDY08819	Canola	nucleus	28.27	28.97
CDX81268	Canola	nucleus	26.14	28.29
KRH43214	Soybean	nucleus	24.92	27.33
KRH59375	Soybean	nucleus	23.1	26.57
AT5G10110.1	Thale cress	nucleus	25.84	26.48
AT5G65120.1	Thale cress	nucleus	24.92	25.87
VIT_00s1188g00010.t01	Wine grape	cytosol	28.27	25.34
PGSC0003DMT400053153	Potato	nucleus	25.84	23.61
Solyc04g054900.2.1	Tomato	nucleus	25.23	23.12
VIT_00s0662g00020.t01	Wine grape	cytosol, nucleus	16.41	14.06

Protein Annotations

EnsemblPlants:Os02t0752300-01	EnsemblPlantsGene:Os02g0752300	EntrezGene:4330751	PANTHER:PTHR33924	PANTHER:PTHR33924:SF2	ProteinID:BAD15558.1
ProteinID:BAD15657.1	ProteinID:BAF10055.1	ProteinID:BAS80959.1	RefSeq:XP_015624034.1	RefSeq:XP_015624035.1	SEG:seg
UniParc:UPI0000358AB7	UniProt:Q6Z8I6	MapMan:35.2	:	:	:

Description

Conserved hypothetical protein. (Os02t0752300-01)

Coordinates

chr2:-:31622776..31627571

Molecular Weight (calculated)

36328.4 Da

IEP (calculated)

5.002

GRAVY (calculated)

-0.709

Length

329 amino acids

Sequence
(BLAST)

001: MGENAQGSGR RPFGDLTNVL GKRPAPSNLE KSAGGIKIVR VEKAVEPRKE FDETAKASGG ATRNTLPLFD SIAKENLMRP SIFRETKMQH MAAEAAVLLS
101: KESDDMRSCA MSLGSSGLHD KEQESSLESE GGCEEDDDDD MDSEYLAYTR DSTKTATNDG ECLTQEEMAG SSGNQKPLSS LDFTTGCDDM PCSDVHHHSL
201: GNSELENDDT TKSCACSFCL KAAFMWTDLH YQDTRGRLAA LKKSIKFARL LGKRSQGDEY SVNAGRYNLK RAAEMEFELY QQQRSLFLHT ENVLIRESAQ
301: LHSSLVKLKE FRENCKTDLE TASSSLLGK

Best Arabidopsis Sequence Match ( AT5G65120.1 )
(BLAST)

001: MTGDWCSLVV SKETRVALCD MTNLPSKRGL SAILGDLLLK SGDDSGKSLA AREGSGVKFS KRLCLVVDDL VKESTRTSDT NEASSSEDKI SYDCDSENLD
101: VKESQGETNA GDIDVEPSKD DTVKETCEKD SNMNVCGSQT DAVTSEDLAM TLFSSNNNES EGLLVPNPQA IKSFNMNRCS NVDGMGIVNH HMEADGELKS
201: CSCSFCLTAA YIWSDLHYQD IKGRLSVLKK SQKEASGLIQ RNDRGTPTDI YGSENSNNST NTDNPMEQWT SLFRNMEGIL ARESNHLHNS FVAMKELREN
301: CKIDLERATK TSQQNNT

Arabidopsis Description

At5g65120 [Source:UniProtKB/TrEMBL;Acc:B4F7Q0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.